RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
CHRNA3-205ENST00000559080 MYOM2P54296 1465 aa17.05■□□□□ 0.32
CHRNA3-205ENST00000559080 ITGAEP38570 1179 aa17.04■□□□□ 0.32
CHRNA3-205ENST00000559080 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
CHRNA3-205ENST00000559080 PXDNQ92626 1479 aa17.02■□□□□ 0.32
CHRNA3-205ENST00000559080 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
CHRNA3-205ENST00000559080 ZRANB1Q9UGI0 708 aa17.01■□□□□ 0.31
CHRNA3-205ENST00000559080 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
CHRNA3-205ENST00000559080 GLI3P10071 1580 aa16.99■□□□□ 0.31
CHRNA3-205ENST00000559080 HFM1A2PYH4 1435 aa16.98■□□□□ 0.31
CHRNA3-205ENST00000559080 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
CHRNA3-205ENST00000559080 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
CHRNA3-205ENST00000559080 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
CHRNA3-205ENST00000559080 FOXD1Q16676 465 aa16.96■□□□□ 0.31
CHRNA3-205ENST00000559080 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
CHRNA3-205ENST00000559080 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.3
CHRNA3-205ENST00000559080 ESCO1Q5FWF5 840 aa16.94■□□□□ 0.3
CHRNA3-205ENST00000559080 SLIT2O94813 1529 aa16.94■□□□□ 0.3
CHRNA3-205ENST00000559080 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
CHRNA3-205ENST00000559080 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
CHRNA3-205ENST00000559080 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
CHRNA3-205ENST00000559080 FOXO3O43524 673 aa16.93■□□□□ 0.3
CHRNA3-205ENST00000559080 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
CHRNA3-205ENST00000559080 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-205ENST00000559080 NAIPQ13075 1403 aa16.92■□□□□ 0.3
CHRNA3-205ENST00000559080 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
CHRNA3-205ENST00000559080 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
CHRNA3-205ENST00000559080 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-205ENST00000559080 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
CHRNA3-205ENST00000559080 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
CHRNA3-205ENST00000559080 LRP5O75197 1615 aa16.9■□□□□ 0.3
CHRNA3-205ENST00000559080 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
CHRNA3-205ENST00000559080 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
CHRNA3-205ENST00000559080 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
CHRNA3-205ENST00000559080 TECPR2O15040 1411 aa16.88■□□□□ 0.29
CHRNA3-205ENST00000559080 DEFB132Q7Z7B7 95 aa16.87■□□□□ 0.29
CHRNA3-205ENST00000559080 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
CHRNA3-205ENST00000559080 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
CHRNA3-205ENST00000559080 WAPLQ7Z5K2 1190 aa16.86■□□□□ 0.29
CHRNA3-205ENST00000559080 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
CHRNA3-205ENST00000559080 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
CHRNA3-205ENST00000559080 PLEKHH1Q9ULM0 1364 aa16.84■□□□□ 0.29
CHRNA3-205ENST00000559080 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CHRNA3-205ENST00000559080 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CHRNA3-205ENST00000559080 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
CHRNA3-205ENST00000559080 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-205ENST00000559080 SEPT12Q8IYM1 358 aa16.81■□□□□ 0.28
CHRNA3-205ENST00000559080 STK26Q9P289 416 aa16.81■□□□□ 0.28
CHRNA3-205ENST00000559080 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
CHRNA3-205ENST00000559080 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
CHRNA3-205ENST00000559080 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
CHRNA3-205ENST00000559080 VPS72Q15906 364 aa16.79■□□□□ 0.28
CHRNA3-205ENST00000559080 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
CHRNA3-205ENST00000559080 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
CHRNA3-205ENST00000559080 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
CHRNA3-205ENST00000559080 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
CHRNA3-205ENST00000559080 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
CHRNA3-205ENST00000559080 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.27
CHRNA3-205ENST00000559080 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-205ENST00000559080 NRXN1Q9ULB1 1477 aa16.76■□□□□ 0.27
CHRNA3-205ENST00000559080 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
CHRNA3-205ENST00000559080 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
CHRNA3-205ENST00000559080 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
CHRNA3-205ENST00000559080 TNS1Q9HBL0 1735 aaKnown RBP16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
CHRNA3-205ENST00000559080 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
CHRNA3-205ENST00000559080 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
CHRNA3-205ENST00000559080 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
CHRNA3-205ENST00000559080 HRCP23327 699 aa16.72■□□□□ 0.27
CHRNA3-205ENST00000559080 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
CHRNA3-205ENST00000559080 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
CHRNA3-205ENST00000559080 PSME1Q06323 249 aa16.71■□□□□ 0.27
CHRNA3-205ENST00000559080 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.27
CHRNA3-205ENST00000559080 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
CHRNA3-205ENST00000559080 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
CHRNA3-205ENST00000559080 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
CHRNA3-205ENST00000559080 BAG6P46379 1132 aa16.69■□□□□ 0.26
CHRNA3-205ENST00000559080 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
CHRNA3-205ENST00000559080 C14orf93Q9H972 538 aaKnown RBP16.68■□□□□ 0.26
CHRNA3-205ENST00000559080 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
CHRNA3-205ENST00000559080 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
CHRNA3-205ENST00000559080 LMOD2Q6P5Q4 547 aa16.66■□□□□ 0.26
CHRNA3-205ENST00000559080 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
CHRNA3-205ENST00000559080 ANKARQ7Z5J8 1434 aa16.65■□□□□ 0.26
CHRNA3-205ENST00000559080 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
CHRNA3-205ENST00000559080 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CHRNA3-205ENST00000559080 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
CHRNA3-205ENST00000559080 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
CHRNA3-205ENST00000559080 PMFBP1Q8TBY8 1022 aa16.64■□□□□ 0.25
CHRNA3-205ENST00000559080 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
CHRNA3-205ENST00000559080 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-205ENST00000559080 A0A0G2JS52 829 aa16.63■□□□□ 0.25
CHRNA3-205ENST00000559080 MYT1Q01538 1121 aa16.63■□□□□ 0.25
CHRNA3-205ENST00000559080 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
CHRNA3-205ENST00000559080 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
CHRNA3-205ENST00000559080 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms