RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
CPNE6-210ENST00000558995 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
CPNE6-210ENST00000558995 PREX1Q8TCU6 1659 aa17.57■□□□□ 0.4
CPNE6-210ENST00000558995 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
CPNE6-210ENST00000558995 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
CPNE6-210ENST00000558995 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
CPNE6-210ENST00000558995 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
CPNE6-210ENST00000558995 PDE4AP27815 886 aa17.55■□□□□ 0.4
CPNE6-210ENST00000558995 SBNO2Q9Y2G9 1366 aa17.54■□□□□ 0.4
CPNE6-210ENST00000558995 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
CPNE6-210ENST00000558995 AGLP35573 1532 aa17.54■□□□□ 0.4
CPNE6-210ENST00000558995 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
CPNE6-210ENST00000558995 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
CPNE6-210ENST00000558995 BACH2Q9BYV9 841 aa17.53■□□□□ 0.4
CPNE6-210ENST00000558995 MYO3AQ8NEV4 1616 aa17.52■□□□□ 0.4
CPNE6-210ENST00000558995 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
CPNE6-210ENST00000558995 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
CPNE6-210ENST00000558995 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
CPNE6-210ENST00000558995 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
CPNE6-210ENST00000558995 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
CPNE6-210ENST00000558995 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
CPNE6-210ENST00000558995 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
CPNE6-210ENST00000558995 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
CPNE6-210ENST00000558995 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
CPNE6-210ENST00000558995 NGEFQ8N5V2 710 aa17.5■□□□□ 0.39
CPNE6-210ENST00000558995 STK26Q9P289 416 aa17.5■□□□□ 0.39
CPNE6-210ENST00000558995 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
CPNE6-210ENST00000558995 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
CPNE6-210ENST00000558995 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
CPNE6-210ENST00000558995 APAF1O14727 1248 aa17.48■□□□□ 0.39
CPNE6-210ENST00000558995 SLC12A5Q9H2X9 1139 aa17.48■□□□□ 0.39
CPNE6-210ENST00000558995 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
CPNE6-210ENST00000558995 ZFYVE9O95405 1425 aa17.48■□□□□ 0.39
CPNE6-210ENST00000558995 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
CPNE6-210ENST00000558995 CENPQQ7L2Z9 268 aaPredicted RBP17.45■□□□□ 0.38
CPNE6-210ENST00000558995 POLR3AO14802 1390 aaPredicted RBP17.45■□□□□ 0.38
CPNE6-210ENST00000558995 E9PSI1 815 aa17.45■□□□□ 0.38
CPNE6-210ENST00000558995 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
CPNE6-210ENST00000558995 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
CPNE6-210ENST00000558995 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
CPNE6-210ENST00000558995 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
CPNE6-210ENST00000558995 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
CPNE6-210ENST00000558995 NBR1Q14596 966 aa17.42■□□□□ 0.38
CPNE6-210ENST00000558995 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
CPNE6-210ENST00000558995 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
CPNE6-210ENST00000558995 ZMYM3Q14202 1370 aa17.42■□□□□ 0.38
CPNE6-210ENST00000558995 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
CPNE6-210ENST00000558995 TULP4Q9NRJ4 1543 aa17.41■□□□□ 0.38
CPNE6-210ENST00000558995 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
CPNE6-210ENST00000558995 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
CPNE6-210ENST00000558995 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
CPNE6-210ENST00000558995 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
CPNE6-210ENST00000558995 PRAM1Q96QH2 718 aa17.4■□□□□ 0.38
CPNE6-210ENST00000558995 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
CPNE6-210ENST00000558995 YTHDC2Q9H6S0 1430 aaKnown RBP17.39■□□□□ 0.37
CPNE6-210ENST00000558995 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
CPNE6-210ENST00000558995 PUS7Q96PZ0 661 aaKnown RBP17.38■□□□□ 0.37
CPNE6-210ENST00000558995 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
CPNE6-210ENST00000558995 PTPRMP28827 1452 aa17.37■□□□□ 0.37
CPNE6-210ENST00000558995 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
CPNE6-210ENST00000558995 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
CPNE6-210ENST00000558995 BCAR3O75815 825 aa17.36■□□□□ 0.37
CPNE6-210ENST00000558995 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
CPNE6-210ENST00000558995 POGKQ9P215 609 aa17.36■□□□□ 0.37
CPNE6-210ENST00000558995 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
CPNE6-210ENST00000558995 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
CPNE6-210ENST00000558995 PDE4CQ08493 712 aa17.35■□□□□ 0.37
CPNE6-210ENST00000558995 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
CPNE6-210ENST00000558995 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
CPNE6-210ENST00000558995 DDRGK1Q96HY6 314 aa17.34■□□□□ 0.37
CPNE6-210ENST00000558995 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
CPNE6-210ENST00000558995 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
CPNE6-210ENST00000558995 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
CPNE6-210ENST00000558995 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
CPNE6-210ENST00000558995 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
CPNE6-210ENST00000558995 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
CPNE6-210ENST00000558995 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
CPNE6-210ENST00000558995 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
CPNE6-210ENST00000558995 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
CPNE6-210ENST00000558995 TNRQ92752 1358 aa17.31■□□□□ 0.36
CPNE6-210ENST00000558995 MTHFSP49914 203 aa17.3■□□□□ 0.36
CPNE6-210ENST00000558995 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
CPNE6-210ENST00000558995 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
CPNE6-210ENST00000558995 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CPNE6-210ENST00000558995 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
CPNE6-210ENST00000558995 NSD2O96028 1365 aa17.29■□□□□ 0.36
CPNE6-210ENST00000558995 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
CPNE6-210ENST00000558995 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
CPNE6-210ENST00000558995 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
CPNE6-210ENST00000558995 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
CPNE6-210ENST00000558995 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
CPNE6-210ENST00000558995 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
CPNE6-210ENST00000558995 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
CPNE6-210ENST00000558995 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
CPNE6-210ENST00000558995 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
CPNE6-210ENST00000558995 METP08581 1390 aa17.27■□□□□ 0.36
CPNE6-210ENST00000558995 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
CPNE6-210ENST00000558995 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.35
CPNE6-210ENST00000558995 FGD1P98174 961 aa17.26■□□□□ 0.35
CPNE6-210ENST00000558995 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms