RNA–Protein interactions for RNA: ENST00000558926.1

AP3S2-207, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-207ENST00000558926 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
AP3S2-207ENST00000558926 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
AP3S2-207ENST00000558926 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
AP3S2-207ENST00000558926 YTHDC2Q9H6S0 1430 aaKnown RBP16.56■□□□□ 0.24
AP3S2-207ENST00000558926 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
AP3S2-207ENST00000558926 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
AP3S2-207ENST00000558926 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
AP3S2-207ENST00000558926 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
AP3S2-207ENST00000558926 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
AP3S2-207ENST00000558926 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
AP3S2-207ENST00000558926 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
AP3S2-207ENST00000558926 MYOM2P54296 1465 aa16.53■□□□□ 0.24
AP3S2-207ENST00000558926 HRCP23327 699 aa16.52■□□□□ 0.24
AP3S2-207ENST00000558926 LAMC1P11047 1609 aa16.52■□□□□ 0.23
AP3S2-207ENST00000558926 CDC42BPGQ6DT37 1551 aa16.51■□□□□ 0.23
AP3S2-207ENST00000558926 FOXO3O43524 673 aa16.51■□□□□ 0.23
AP3S2-207ENST00000558926 ADAMTS2O95450 1211 aa16.51■□□□□ 0.23
AP3S2-207ENST00000558926 POGKQ9P215 609 aa16.51■□□□□ 0.23
AP3S2-207ENST00000558926 TECPR2O15040 1411 aa16.51■□□□□ 0.23
AP3S2-207ENST00000558926 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
AP3S2-207ENST00000558926 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
AP3S2-207ENST00000558926 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
AP3S2-207ENST00000558926 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
AP3S2-207ENST00000558926 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
AP3S2-207ENST00000558926 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
AP3S2-207ENST00000558926 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
AP3S2-207ENST00000558926 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
AP3S2-207ENST00000558926 AFF2P51816 1311 aa16.47■□□□□ 0.23
AP3S2-207ENST00000558926 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
AP3S2-207ENST00000558926 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
AP3S2-207ENST00000558926 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
AP3S2-207ENST00000558926 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
AP3S2-207ENST00000558926 NGLY1Q96IV0 654 aa16.45■□□□□ 0.22
AP3S2-207ENST00000558926 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
AP3S2-207ENST00000558926 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
AP3S2-207ENST00000558926 RXRBP28702 533 aa16.42■□□□□ 0.22
AP3S2-207ENST00000558926 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
AP3S2-207ENST00000558926 PXDNQ92626 1479 aa16.42■□□□□ 0.22
AP3S2-207ENST00000558926 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
AP3S2-207ENST00000558926 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
AP3S2-207ENST00000558926 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
AP3S2-207ENST00000558926 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
AP3S2-207ENST00000558926 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
AP3S2-207ENST00000558926 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
AP3S2-207ENST00000558926 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
AP3S2-207ENST00000558926 PSME1Q06323 249 aa16.38■□□□□ 0.21
AP3S2-207ENST00000558926 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
AP3S2-207ENST00000558926 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
AP3S2-207ENST00000558926 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
AP3S2-207ENST00000558926 USP21Q9UK80 565 aa16.37■□□□□ 0.21
AP3S2-207ENST00000558926 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
AP3S2-207ENST00000558926 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
AP3S2-207ENST00000558926 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
AP3S2-207ENST00000558926 USP32Q8NFA0 1604 aa16.35■□□□□ 0.21
AP3S2-207ENST00000558926 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
AP3S2-207ENST00000558926 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
AP3S2-207ENST00000558926 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
AP3S2-207ENST00000558926 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
AP3S2-207ENST00000558926 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
AP3S2-207ENST00000558926 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
AP3S2-207ENST00000558926 ADGRB2O60241 1585 aa16.33■□□□□ 0.2
AP3S2-207ENST00000558926 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
AP3S2-207ENST00000558926 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
AP3S2-207ENST00000558926 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
AP3S2-207ENST00000558926 L3MBTL2Q969R5 705 aa16.31■□□□□ 0.2
AP3S2-207ENST00000558926 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
AP3S2-207ENST00000558926 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
AP3S2-207ENST00000558926 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
AP3S2-207ENST00000558926 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
AP3S2-207ENST00000558926 EIF3AQ14152 1382 aaKnown RBP16.29■□□□□ 0.2
AP3S2-207ENST00000558926 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
AP3S2-207ENST00000558926 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
AP3S2-207ENST00000558926 RGS12O14924 1447 aa16.28■□□□□ 0.2
AP3S2-207ENST00000558926 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
AP3S2-207ENST00000558926 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
AP3S2-207ENST00000558926 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
AP3S2-207ENST00000558926 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.25e-8■■■■□ 22.6
AP3S2-207ENST00000558926 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
AP3S2-207ENST00000558926 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
AP3S2-207ENST00000558926 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
AP3S2-207ENST00000558926 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
AP3S2-207ENST00000558926 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
AP3S2-207ENST00000558926 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
AP3S2-207ENST00000558926 BCL9LQ86UU0 1499 aa16.24■□□□□ 0.19
AP3S2-207ENST00000558926 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
AP3S2-207ENST00000558926 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
AP3S2-207ENST00000558926 ATRNO75882 1429 aa16.24■□□□□ 0.19
AP3S2-207ENST00000558926 ATP7BP35670 1465 aa16.22■□□□□ 0.19
AP3S2-207ENST00000558926 CENPJQ9HC77 1338 aaPredicted RBP16.22■□□□□ 0.19
AP3S2-207ENST00000558926 QRICH2Q9H0J4 1663 aa16.22■□□□□ 0.19
AP3S2-207ENST00000558926 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
AP3S2-207ENST00000558926 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
AP3S2-207ENST00000558926 GJD4Q96KN9 370 aaPredicted RBP16.22■□□□□ 0.19
AP3S2-207ENST00000558926 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.19
AP3S2-207ENST00000558926 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
AP3S2-207ENST00000558926 ALS2Q96Q42 1657 aa16.21■□□□□ 0.18
AP3S2-207ENST00000558926 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
AP3S2-207ENST00000558926 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
AP3S2-207ENST00000558926 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
AP3S2-207ENST00000558926 ACEP12821 1306 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms