RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 LAMC1P11047 1609 aa13.53□□□□□ -0.24
RORA-208ENST00000558904 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
RORA-208ENST00000558904 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
RORA-208ENST00000558904 NUP155O75694 1391 aa13.52□□□□□ -0.25
RORA-208ENST00000558904 IQGAP3Q86VI3 1631 aa13.5□□□□□ -0.25
RORA-208ENST00000558904 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
RORA-208ENST00000558904 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
RORA-208ENST00000558904 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
RORA-208ENST00000558904 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
RORA-208ENST00000558904 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
RORA-208ENST00000558904 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
RORA-208ENST00000558904 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
RORA-208ENST00000558904 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
RORA-208ENST00000558904 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
RORA-208ENST00000558904 MYOM2P54296 1465 aa13.47□□□□□ -0.25
RORA-208ENST00000558904 EP400Q96L91 3159 aa13.46□□□□□ -0.25
RORA-208ENST00000558904 DEFB132Q7Z7B7 95 aa13.46□□□□□ -0.25
RORA-208ENST00000558904 HFM1A2PYH4 1435 aa13.46□□□□□ -0.26
RORA-208ENST00000558904 FOXO3O43524 673 aa13.44□□□□□ -0.26
RORA-208ENST00000558904 BAG6P46379 1132 aa13.44□□□□□ -0.26
RORA-208ENST00000558904 LRP5O75197 1615 aa13.43□□□□□ -0.26
RORA-208ENST00000558904 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
RORA-208ENST00000558904 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
RORA-208ENST00000558904 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
RORA-208ENST00000558904 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
RORA-208ENST00000558904 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
RORA-208ENST00000558904 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
RORA-208ENST00000558904 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
RORA-208ENST00000558904 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
RORA-208ENST00000558904 VPS72Q15906 364 aa13.41□□□□□ -0.26
RORA-208ENST00000558904 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
RORA-208ENST00000558904 SPHKAPQ2M3C7 1700 aa13.41□□□□□ -0.26
RORA-208ENST00000558904 SLIT2O94813 1529 aa13.4□□□□□ -0.26
RORA-208ENST00000558904 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
RORA-208ENST00000558904 HRCP23327 699 aa13.4□□□□□ -0.26
RORA-208ENST00000558904 HAP1P54257 671 aaPredicted RBP13.4□□□□□ -0.26
RORA-208ENST00000558904 PXDNQ92626 1479 aa13.4□□□□□ -0.26
RORA-208ENST00000558904 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
RORA-208ENST00000558904 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
RORA-208ENST00000558904 PSME1Q06323 249 aa13.38□□□□□ -0.27
RORA-208ENST00000558904 POTEHQ6S545 545 aa13.38□□□□□ -0.27
RORA-208ENST00000558904 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
RORA-208ENST00000558904 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
RORA-208ENST00000558904 GLI3P10071 1580 aa13.37□□□□□ -0.27
RORA-208ENST00000558904 KIF1BO60333 1816 aa13.36□□□□□ -0.27
RORA-208ENST00000558904 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
RORA-208ENST00000558904 CDC42BPGQ6DT37 1551 aa13.35□□□□□ -0.27
RORA-208ENST00000558904 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
RORA-208ENST00000558904 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
RORA-208ENST00000558904 A0A0G2JS52 829 aa13.34□□□□□ -0.27
RORA-208ENST00000558904 ITGAEP38570 1179 aa13.34□□□□□ -0.27
RORA-208ENST00000558904 MYT1Q01538 1121 aa13.34□□□□□ -0.27
RORA-208ENST00000558904 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
RORA-208ENST00000558904 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
RORA-208ENST00000558904 NAIPQ13075 1403 aa13.31□□□□□ -0.28
RORA-208ENST00000558904 YY1P25490 414 aa13.31□□□□□ -0.28
RORA-208ENST00000558904 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
RORA-208ENST00000558904 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
RORA-208ENST00000558904 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
RORA-208ENST00000558904 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
RORA-208ENST00000558904 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
RORA-208ENST00000558904 STK26Q9P289 416 aa13.29□□□□□ -0.28
RORA-208ENST00000558904 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
RORA-208ENST00000558904 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
RORA-208ENST00000558904 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
RORA-208ENST00000558904 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 TECPR2O15040 1411 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
RORA-208ENST00000558904 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
RORA-208ENST00000558904 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.29
RORA-208ENST00000558904 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
RORA-208ENST00000558904 BTG4Q9NY30 223 aa13.25□□□□□ -0.29
RORA-208ENST00000558904 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
RORA-208ENST00000558904 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
RORA-208ENST00000558904 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
RORA-208ENST00000558904 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
RORA-208ENST00000558904 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
RORA-208ENST00000558904 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
RORA-208ENST00000558904 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
RORA-208ENST00000558904 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
RORA-208ENST00000558904 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
RORA-208ENST00000558904 PPLO60437 1756 aa13.22□□□□□ -0.29
RORA-208ENST00000558904 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
RORA-208ENST00000558904 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
RORA-208ENST00000558904 CAMKK2Q96RR4 588 aa13.22□□□□□ -0.29
RORA-208ENST00000558904 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
RORA-208ENST00000558904 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
RORA-208ENST00000558904 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
RORA-208ENST00000558904 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
RORA-208ENST00000558904 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
RORA-208ENST00000558904 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.3
RORA-208ENST00000558904 APBA3O96018 575 aa13.2□□□□□ -0.3
RORA-208ENST00000558904 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
RORA-208ENST00000558904 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
RORA-208ENST00000558904 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
RORA-208ENST00000558904 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms