RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 IQSEC2Q5JU85 1478 aa10.89□□□□□ -0.67
TRAF3-206ENST00000558880 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
TRAF3-206ENST00000558880 HRCP23327 699 aa10.88□□□□□ -0.67
TRAF3-206ENST00000558880 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
TRAF3-206ENST00000558880 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
TRAF3-206ENST00000558880 VWDEQ8N2E2 1590 aa10.87□□□□□ -0.67
TRAF3-206ENST00000558880 KIF3BO15066 747 aa10.87□□□□□ -0.67
TRAF3-206ENST00000558880 GCC2Q8IWJ2 1684 aa10.87□□□□□ -0.67
TRAF3-206ENST00000558880 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
TRAF3-206ENST00000558880 PZPP20742 1482 aa10.86□□□□□ -0.67
TRAF3-206ENST00000558880 DEPDC5O75140 1603 aa10.85□□□□□ -0.67
TRAF3-206ENST00000558880 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-206ENST00000558880 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-206ENST00000558880 KDM5DQ9BY66 1539 aa10.84□□□□□ -0.67
TRAF3-206ENST00000558880 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
TRAF3-206ENST00000558880 EIF2AK4Q9P2K8 1649 aaKnown RBP10.84□□□□□ -0.67
TRAF3-206ENST00000558880 ESF1Q9H501 851 aaKnown RBP10.84□□□□□ -0.67
TRAF3-206ENST00000558880 UNC13BO14795 1591 aa10.84□□□□□ -0.67
TRAF3-206ENST00000558880 C2orf72A6NCS6 295 aa10.83□□□□□ -0.68
TRAF3-206ENST00000558880 GGT6Q6P531 493 aa10.83□□□□□ -0.68
TRAF3-206ENST00000558880 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
TRAF3-206ENST00000558880 C3P01024 1663 aa10.82□□□□□ -0.68
TRAF3-206ENST00000558880 HSPA1LP34931 641 aa10.82□□□□□ -0.68
TRAF3-206ENST00000558880 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
TRAF3-206ENST00000558880 LMTK2Q8IWU2 1503 aa10.82□□□□□ -0.68
TRAF3-206ENST00000558880 NUP155O75694 1391 aa10.81□□□□□ -0.68
TRAF3-206ENST00000558880 ABCC3O15438 1527 aa10.81□□□□□ -0.68
TRAF3-206ENST00000558880 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
TRAF3-206ENST00000558880 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
TRAF3-206ENST00000558880 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
TRAF3-206ENST00000558880 PLA2R1Q13018 1463 aa10.8□□□□□ -0.68
TRAF3-206ENST00000558880 FAM135AQ9P2D6 1515 aa10.79□□□□□ -0.68
TRAF3-206ENST00000558880 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
TRAF3-206ENST00000558880 MPHOSPH9Q99550 1183 aa10.79□□□□□ -0.68
TRAF3-206ENST00000558880 CAMSAP1Q5T5Y3 1602 aa10.79□□□□□ -0.68
TRAF3-206ENST00000558880 NPATQ14207 1427 aa10.78□□□□□ -0.68
TRAF3-206ENST00000558880 IQGAP3Q86VI3 1631 aa10.78□□□□□ -0.68
TRAF3-206ENST00000558880 KIF3CO14782 793 aa10.78□□□□□ -0.68
TRAF3-206ENST00000558880 ARHGAP31Q2M1Z3 1444 aa10.77□□□□□ -0.68
TRAF3-206ENST00000558880 ZMYM3Q14202 1370 aa10.77□□□□□ -0.69
TRAF3-206ENST00000558880 WASHC2CQ9Y4E1 1318 aa10.76□□□□□ -0.69
TRAF3-206ENST00000558880 SNPHO15079 494 aa10.75□□□□□ -0.69
TRAF3-206ENST00000558880 FBXO31Q5XUX0 539 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-206ENST00000558880 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
TRAF3-206ENST00000558880 NOS1P29475 1434 aa10.75□□□□□ -0.69
TRAF3-206ENST00000558880 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
TRAF3-206ENST00000558880 HOXB3P14651 431 aaPredicted RBP10.74□□□□□ -0.69
TRAF3-206ENST00000558880 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
TRAF3-206ENST00000558880 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
TRAF3-206ENST00000558880 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
TRAF3-206ENST00000558880 ST18O60284 1047 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 TOM1O60784 492 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 DSG2Q14126 1118 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 CRISPLD2Q9H0B8 497 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 KANK1Q14678 1352 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 CNTLNQ9NXG0 1405 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 CEP152O94986 1710 aa10.72□□□□□ -0.69
TRAF3-206ENST00000558880 E9PCH4 1651 aa10.71□□□□□ -0.69
TRAF3-206ENST00000558880 TET3O43151 1660 aa10.71□□□□□ -0.69
TRAF3-206ENST00000558880 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
TRAF3-206ENST00000558880 CLTCQ00610 1675 aaKnown RBP10.7□□□□□ -0.7
TRAF3-206ENST00000558880 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
TRAF3-206ENST00000558880 ERVK-7P63135 1459 aa10.7□□□□□ -0.7
TRAF3-206ENST00000558880 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
TRAF3-206ENST00000558880 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
TRAF3-206ENST00000558880 SYNMO15061 1565 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 PDE4AP27815 886 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 DOK7Q18PE1 504 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
TRAF3-206ENST00000558880 FOXK1P85037 733 aa10.68□□□□□ -0.7
TRAF3-206ENST00000558880 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
TRAF3-206ENST00000558880 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
TRAF3-206ENST00000558880 UGGT1Q9NYU2 1555 aa10.68□□□□□ -0.7
TRAF3-206ENST00000558880 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
TRAF3-206ENST00000558880 IDI1Q13907 227 aa10.66□□□□□ -0.7
TRAF3-206ENST00000558880 PPP1R15BQ5SWA1 713 aa10.66□□□□□ -0.7
TRAF3-206ENST00000558880 MARVELD3Q96A59 401 aa10.66□□□□□ -0.7
TRAF3-206ENST00000558880 TRPM2O94759 1503 aa10.66□□□□□ -0.7
TRAF3-206ENST00000558880 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
TRAF3-206ENST00000558880 RGS17Q9UGC6 210 aaPredicted RBP10.65□□□□□ -0.7
TRAF3-206ENST00000558880 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
TRAF3-206ENST00000558880 CEP170BQ9Y4F5 1589 aaPredicted RBP10.65□□□□□ -0.71
TRAF3-206ENST00000558880 TNRQ92752 1358 aa10.65□□□□□ -0.71
TRAF3-206ENST00000558880 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
TRAF3-206ENST00000558880 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
TRAF3-206ENST00000558880 PIK3C2BO00750 1634 aa10.64□□□□□ -0.71
TRAF3-206ENST00000558880 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-206ENST00000558880 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRAF3-206ENST00000558880 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
TRAF3-206ENST00000558880 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
TRAF3-206ENST00000558880 CPS1P31327 1500 aa10.62□□□□□ -0.71
TRAF3-206ENST00000558880 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
TRAF3-206ENST00000558880 POTEMA6NI47 508 aa10.61□□□□□ -0.71
TRAF3-206ENST00000558880 MFSD10Q14728 455 aa10.61□□□□□ -0.71
TRAF3-206ENST00000558880 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
TRAF3-206ENST00000558880 SLC52A1Q9NWF4 448 aa10.61□□□□□ -0.71
TRAF3-206ENST00000558880 CLSPNQ9HAW4 1339 aa10.6□□□□□ -0.71
TRAF3-206ENST00000558880 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms