RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 NAIPQ13075 1403 aa15.94■□□□□ 0.14
CTDSPL2-203ENST00000558791 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
CTDSPL2-203ENST00000558791 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
CTDSPL2-203ENST00000558791 USP21Q9UK80 565 aa15.93■□□□□ 0.14
CTDSPL2-203ENST00000558791 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
CTDSPL2-203ENST00000558791 PPLO60437 1756 aa15.92■□□□□ 0.14
CTDSPL2-203ENST00000558791 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
CTDSPL2-203ENST00000558791 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
CTDSPL2-203ENST00000558791 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
CTDSPL2-203ENST00000558791 CDC42BPGQ6DT37 1551 aa15.9■□□□□ 0.14
CTDSPL2-203ENST00000558791 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
CTDSPL2-203ENST00000558791 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
CTDSPL2-203ENST00000558791 CCDC125Q86Z20 511 aa15.89■□□□□ 0.13
CTDSPL2-203ENST00000558791 ATRNO75882 1429 aa15.88■□□□□ 0.13
CTDSPL2-203ENST00000558791 MYOM2P54296 1465 aa15.87■□□□□ 0.13
CTDSPL2-203ENST00000558791 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
CTDSPL2-203ENST00000558791 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CTDSPL2-203ENST00000558791 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
CTDSPL2-203ENST00000558791 TECPR2O15040 1411 aa15.85■□□□□ 0.13
CTDSPL2-203ENST00000558791 PXDNQ92626 1479 aa15.84■□□□□ 0.13
CTDSPL2-203ENST00000558791 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
CTDSPL2-203ENST00000558791 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
CTDSPL2-203ENST00000558791 EP400Q96L91 3159 aa15.83■□□□□ 0.13
CTDSPL2-203ENST00000558791 SRCAPQ6ZRS2 3230 aa15.83■□□□□ 0.13
CTDSPL2-203ENST00000558791 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
CTDSPL2-203ENST00000558791 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
CTDSPL2-203ENST00000558791 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
CTDSPL2-203ENST00000558791 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
CTDSPL2-203ENST00000558791 KNDC1Q76NI1 1749 aa15.82■□□□□ 0.12
CTDSPL2-203ENST00000558791 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
CTDSPL2-203ENST00000558791 KIF1AQ12756 1690 aa15.8■□□□□ 0.12
CTDSPL2-203ENST00000558791 CCDC144AA2RUR9 1427 aa15.8■□□□□ 0.12
CTDSPL2-203ENST00000558791 FOXO3O43524 673 aa15.8■□□□□ 0.12
CTDSPL2-203ENST00000558791 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
CTDSPL2-203ENST00000558791 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
CTDSPL2-203ENST00000558791 SIRT1Q96EB6 747 aa15.79■□□□□ 0.12
CTDSPL2-203ENST00000558791 ADGRF5Q8IZF2 1346 aa15.78■□□□□ 0.12
CTDSPL2-203ENST00000558791 FMN2Q9NZ56 1722 aa15.78■□□□□ 0.12
CTDSPL2-203ENST00000558791 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.12
CTDSPL2-203ENST00000558791 SPATA31E1Q6ZUB1 1445 aa15.77■□□□□ 0.11
CTDSPL2-203ENST00000558791 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
CTDSPL2-203ENST00000558791 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
CTDSPL2-203ENST00000558791 SLIT2O94813 1529 aa15.76■□□□□ 0.11
CTDSPL2-203ENST00000558791 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
CTDSPL2-203ENST00000558791 STK26Q9P289 416 aa15.75■□□□□ 0.11
CTDSPL2-203ENST00000558791 PIK3C2GO75747 1445 aa15.75■□□□□ 0.11
CTDSPL2-203ENST00000558791 PSME1Q06323 249 aa15.74■□□□□ 0.11
CTDSPL2-203ENST00000558791 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
CTDSPL2-203ENST00000558791 BLMP54132 1417 aaPredicted RBP15.74■□□□□ 0.11
CTDSPL2-203ENST00000558791 USP32Q8NFA0 1604 aa15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 NWD2Q9ULI1 1742 aa15.73■□□□□ 0.11
CTDSPL2-203ENST00000558791 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
CTDSPL2-203ENST00000558791 GLI3P10071 1580 aa15.71■□□□□ 0.11
CTDSPL2-203ENST00000558791 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
CTDSPL2-203ENST00000558791 KCNA4P22459 653 aa15.71■□□□□ 0.11
CTDSPL2-203ENST00000558791 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.11
CTDSPL2-203ENST00000558791 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.1
CTDSPL2-203ENST00000558791 TNS3Q68CZ2 1445 aa15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 PLEKHH1Q9ULM0 1364 aa15.7■□□□□ 0.1
CTDSPL2-203ENST00000558791 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
CTDSPL2-203ENST00000558791 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
CTDSPL2-203ENST00000558791 VPS72Q15906 364 aa15.69■□□□□ 0.1
CTDSPL2-203ENST00000558791 C14orf93Q9H972 538 aaKnown RBP15.69■□□□□ 0.1
CTDSPL2-203ENST00000558791 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
CTDSPL2-203ENST00000558791 NRXN1Q9ULB1 1477 aa15.67■□□□□ 0.1
CTDSPL2-203ENST00000558791 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
CTDSPL2-203ENST00000558791 SEPT12Q8IYM1 358 aa15.66■□□□□ 0.1
CTDSPL2-203ENST00000558791 ANKARQ7Z5J8 1434 aa15.66■□□□□ 0.1
CTDSPL2-203ENST00000558791 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
CTDSPL2-203ENST00000558791 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
CTDSPL2-203ENST00000558791 DLC1Q96QB1 1528 aa15.64■□□□□ 0.09
CTDSPL2-203ENST00000558791 KRT27Q7Z3Y8 459 aa15.63■□□□□ 0.09
CTDSPL2-203ENST00000558791 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
CTDSPL2-203ENST00000558791 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
CTDSPL2-203ENST00000558791 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
CTDSPL2-203ENST00000558791 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
CTDSPL2-203ENST00000558791 PRAM1Q96QH2 718 aa15.61■□□□□ 0.09
CTDSPL2-203ENST00000558791 POGKQ9P215 609 aa15.61■□□□□ 0.09
CTDSPL2-203ENST00000558791 LRP5O75197 1615 aa15.61■□□□□ 0.09
CTDSPL2-203ENST00000558791 LMOD2Q6P5Q4 547 aa15.6■□□□□ 0.09
CTDSPL2-203ENST00000558791 DEFB132Q7Z7B7 95 aa15.6■□□□□ 0.09
CTDSPL2-203ENST00000558791 CABLES1Q8TDN4 633 aa15.6■□□□□ 0.09
CTDSPL2-203ENST00000558791 FAM83GA6ND36 823 aa15.59■□□□□ 0.09
CTDSPL2-203ENST00000558791 BAG6P46379 1132 aa15.59■□□□□ 0.09
CTDSPL2-203ENST00000558791 STAC3Q96MF2 364 aa15.59■□□□□ 0.09
CTDSPL2-203ENST00000558791 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
CTDSPL2-203ENST00000558791 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
CTDSPL2-203ENST00000558791 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
CTDSPL2-203ENST00000558791 TRPM3Q9HCF6 1732 aaPredicted RBP15.58■□□□□ 0.08
CTDSPL2-203ENST00000558791 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms