RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ABCC3	O15438	1527 aa		10.89	□□□□□ -0.67
MARK3-215	ENST00000558787	KIF15	Q9NS87	1388 aa		10.89	□□□□□ -0.67
MARK3-215	ENST00000558787	RNF17	Q9BXT8	1623 aa	Known RBP	10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	PTPN23	Q9H3S7	1636 aa		10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	UBAP1L	F5GYI3	381 aa		10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	HOXB1	P14653	301 aa	Predicted RBP	10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	FGD6	Q6ZV73	1430 aa		10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	ANKLE2	Q86XL3	938 aa		10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.88	□□□□□ -0.67
MARK3-215	ENST00000558787	MROH1	Q8NDA8	1641 aa		10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	DAPK1	P53355	1430 aa		10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	FAM50A	Q14320	339 aa	Known RBP	10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	HS3ST6	Q96QI5	342 aa		10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	DUOX2	Q9NRD8	1548 aa		10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	FAM135A	Q9P2D6	1515 aa		10.87	□□□□□ -0.67
MARK3-215	ENST00000558787	CFAP65	Q6ZU64	1925 aa	Known RBP	10.86	□□□□□ -0.67
MARK3-215	ENST00000558787	NEURL4	Q96JN8	1562 aa		10.86	□□□□□ -0.67
MARK3-215	ENST00000558787	UGGT1	Q9NYU2	1555 aa		10.86	□□□□□ -0.67
MARK3-215	ENST00000558787	CEP152	O94986	1710 aa		10.85	□□□□□ -0.67
MARK3-215	ENST00000558787	ERVK-7	P63135	1459 aa		10.85	□□□□□ -0.67
MARK3-215	ENST00000558787	NLRP1	Q9C000	1473 aa		10.85	□□□□□ -0.67
MARK3-215	ENST00000558787	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.84	□□□□□ -0.67
MARK3-215	ENST00000558787	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.84	□□□□□ -0.67
MARK3-215	ENST00000558787	ZSWIM6	Q9HCJ5	1215 aa		10.84	□□□□□ -0.67
MARK3-215	ENST00000558787	SHANK2	Q9UPX8	1470 aa		10.84	□□□□□ -0.67
MARK3-215	ENST00000558787	CROCC2	H7BZ55	1655 aa		10.83	□□□□□ -0.68
MARK3-215	ENST00000558787	SPATA31D1	Q6ZQQ2	1576 aa		10.83	□□□□□ -0.68
MARK3-215	ENST00000558787	IQSEC2	Q5JU85	1478 aa		10.83	□□□□□ -0.68
MARK3-215	ENST00000558787	DISP3	Q9P2K9	1392 aa		10.83	□□□□□ -0.68
MARK3-215	ENST00000558787	NPHP4	O75161	1426 aa	Predicted RBP	10.83	□□□□□ -0.68
MARK3-215	ENST00000558787	ANKRD30A	Q9BXX3	1397 aa		10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	POLR1A	O95602	1720 aa	Predicted RBP	10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	PIP4K2B	P78356	416 aa		10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	ERBIN	Q96RT1	1412 aa		10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	ZC3H13	Q5T200	1668 aa	Known RBP	10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	ERBB3	P21860	1342 aa		10.82	□□□□□ -0.68
MARK3-215	ENST00000558787	POTEB3	A0JP26	581 aa		10.81	□□□□□ -0.68
MARK3-215	ENST00000558787	LTK	P29376	864 aa		10.81	□□□□□ -0.68
MARK3-215	ENST00000558787	POTEB	Q6S5H4	581 aa		10.81	□□□□□ -0.68
MARK3-215	ENST00000558787	ILDR2	Q71H61	639 aa		10.81	□□□□□ -0.68
MARK3-215	ENST00000558787	PRDM15	P57071	1507 aa	Predicted RBP	10.8	□□□□□ -0.68
MARK3-215	ENST00000558787	TXNDC2	Q86VQ3	553 aa		10.8	□□□□□ -0.68
MARK3-215	ENST00000558787	HS6ST3	Q8IZP7	471 aa		10.8	□□□□□ -0.68
MARK3-215	ENST00000558787	VWDE	Q8N2E2	1590 aa		10.8	□□□□□ -0.68
MARK3-215	ENST00000558787	MED14	O60244	1454 aa		10.8	□□□□□ -0.68
MARK3-215	ENST00000558787	KANK1	Q14678	1352 aa		10.79	□□□□□ -0.68
MARK3-215	ENST00000558787	ARHGAP31	Q2M1Z3	1444 aa		10.79	□□□□□ -0.68
MARK3-215	ENST00000558787	IDI1	Q13907	227 aa		10.79	□□□□□ -0.68
MARK3-215	ENST00000558787	CHGA	P10645	457 aa	Known RBP	10.78	□□□□□ -0.68
MARK3-215	ENST00000558787	DEPDC5	O75140	1603 aa		10.77	□□□□□ -0.68
MARK3-215	ENST00000558787	HSPA1L	P34931	641 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	ITGAE	P38570	1179 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	GPR153	Q6NV75	609 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	SPNS2	Q8IVW8	549 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	UBR1	Q8IWV7	1749 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	CPS1	P31327	1500 aa		10.77	□□□□□ -0.69
MARK3-215	ENST00000558787	IQGAP1	P46940	1657 aa		10.76	□□□□□ -0.69
MARK3-215	ENST00000558787	C2orf72	A6NCS6	295 aa		10.76	□□□□□ -0.69
MARK3-215	ENST00000558787	TOM1	O60784	492 aa		10.76	□□□□□ -0.69
MARK3-215	ENST00000558787	TMC2	Q8TDI7	906 aa		10.76	□□□□□ -0.69
MARK3-215	ENST00000558787	ADGRL2	O95490	1459 aa		10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	SCAF11	Q99590	1463 aa	Known RBP	10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	STRCP1	A6NGW2	1772 aa		10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	EID1	Q9Y6B2	187 aa		10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	PIK3C2B	O00750	1634 aa		10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	ANKRD50	Q9ULJ7	1429 aa		10.75	□□□□□ -0.69
MARK3-215	ENST00000558787	ARHGAP23	Q9P227	1491 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	KIF3C	O14782	793 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	PPP1R37	O75864	691 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	TMEM2	Q9UHN6	1383 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	LMTK2	Q8IWU2	1503 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	LRRC7	Q96NW7	1537 aa		10.74	□□□□□ -0.69
MARK3-215	ENST00000558787	SYNM	O15061	1565 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	ARSI	Q5FYB1	569 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	VARS2	Q5ST30	1063 aa	Known RBP	10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	SLC26A8	Q96RN1	970 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	KRTAP3-3	Q9BYR6	98 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	KRTAP3-2	Q9BYR7	98 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	SLIT1	O75093	1534 aa		10.73	□□□□□ -0.69
MARK3-215	ENST00000558787	MMRN1	Q13201	1228 aa		10.72	□□□□□ -0.69
MARK3-215	ENST00000558787	RBM33	Q96EV2	1170 aa	Known RBP	10.72	□□□□□ -0.69
MARK3-215	ENST00000558787	NOS1	P29475	1434 aa		10.72	□□□□□ -0.69
MARK3-215	ENST00000558787	ALK	Q9UM73	1620 aa		10.72	□□□□□ -0.69
MARK3-215	ENST00000558787	EFCAB6	Q5THR3	1501 aa		10.71	□□□□□ -0.69
MARK3-215	ENST00000558787	BCAN	Q96GW7	911 aa		10.71	□□□□□ -0.69
MARK3-215	ENST00000558787	SLC52A1	Q9NWF4	448 aa		10.7	□□□□□ -0.7
MARK3-215	ENST00000558787	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.69	□□□□□ -0.7
MARK3-215	ENST00000558787	RYDEN	Q9NUL5	291 aa	Known RBP	10.68	□□□□□ -0.7
MARK3-215	ENST00000558787	ROCK1	Q13464	1354 aa		10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	SOCS7	O14512	581 aa		10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	KCNA6	P17658	529 aa		10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	PROSER2	Q86WR7	435 aa	Predicted RBP	10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	ZNF687	Q8N1G0	1237 aa		10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	ADGRB3	O60242	1522 aa		10.67	□□□□□ -0.7
MARK3-215	ENST00000558787	NUP155	O75694	1391 aa		10.66	□□□□□ -0.7
MARK3-215	ENST00000558787	TMEM94	Q12767	1356 aa		10.66	□□□□□ -0.7
MARK3-215	ENST00000558787	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
MARK3-215	ENST00000558787	TET3	O43151	1660 aa		10.66	□□□□□ -0.7
MARK3-215	ENST00000558787	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.65	□□□□□ -0.7
MARK3-215	ENST00000558787	PPP1R15A	O75807	674 aa	Predicted RBP	10.65	□□□□□ -0.7

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