RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
TSPAN3-205ENST00000558745 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
TSPAN3-205ENST00000558745 LAMC1P11047 1609 aa19.92■□□□□ 0.78
TSPAN3-205ENST00000558745 BRINP3Q76B58 766 aa19.92■□□□□ 0.78
TSPAN3-205ENST00000558745 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
TSPAN3-205ENST00000558745 POGKQ9P215 609 aa19.92■□□□□ 0.78
TSPAN3-205ENST00000558745 MST1RQ04912 1400 aa19.91■□□□□ 0.78
TSPAN3-205ENST00000558745 NBPF8Q3BBV2 869 aa19.91■□□□□ 0.78
TSPAN3-205ENST00000558745 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
TSPAN3-205ENST00000558745 ORAI2Q96SN7 254 aa19.9■□□□□ 0.78
TSPAN3-205ENST00000558745 DCCP43146 1447 aa19.9■□□□□ 0.78
TSPAN3-205ENST00000558745 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.78
TSPAN3-205ENST00000558745 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-205ENST00000558745 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
TSPAN3-205ENST00000558745 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
TSPAN3-205ENST00000558745 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
TSPAN3-205ENST00000558745 DLC1Q96QB1 1528 aa19.84■□□□□ 0.77
TSPAN3-205ENST00000558745 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
TSPAN3-205ENST00000558745 POTEAQ6S8J7 498 aa19.81■□□□□ 0.76
TSPAN3-205ENST00000558745 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-205ENST00000558745 KIAA1210Q9ULL0 1709 aa19.81■□□□□ 0.76
TSPAN3-205ENST00000558745 PHLPP1O60346 1717 aa19.8■□□□□ 0.76
TSPAN3-205ENST00000558745 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
TSPAN3-205ENST00000558745 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-205ENST00000558745 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-205ENST00000558745 ARHGEF28Q8N1W1 1705 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-205ENST00000558745 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.75
TSPAN3-205ENST00000558745 FOXO3O43524 673 aa19.76■□□□□ 0.75
TSPAN3-205ENST00000558745 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-205ENST00000558745 COL16A1Q07092 1604 aaPredicted RBP19.75■□□□□ 0.75
TSPAN3-205ENST00000558745 AHDC1Q5TGY3 1603 aaPredicted RBP19.75■□□□□ 0.75
TSPAN3-205ENST00000558745 FMN2Q9NZ56 1722 aa19.74■□□□□ 0.75
TSPAN3-205ENST00000558745 PMFBP1Q8TBY8 1022 aa19.74■□□□□ 0.75
TSPAN3-205ENST00000558745 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
TSPAN3-205ENST00000558745 RGPD8O14715 1765 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-205ENST00000558745 PRR36Q9H6K5 1346 aa19.73■□□□□ 0.75
TSPAN3-205ENST00000558745 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-205ENST00000558745 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
TSPAN3-205ENST00000558745 JCADQ9P266 1359 aa19.72■□□□□ 0.75
TSPAN3-205ENST00000558745 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
TSPAN3-205ENST00000558745 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
TSPAN3-205ENST00000558745 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-205ENST00000558745 NHSL1Q5SYE7 1610 aa19.71■□□□□ 0.75
TSPAN3-205ENST00000558745 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-205ENST00000558745 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-205ENST00000558745 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-205ENST00000558745 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
TSPAN3-205ENST00000558745 NUDT16Q96DE0 195 aaKnown RBP19.69■□□□□ 0.74
TSPAN3-205ENST00000558745 ADGRB2O60241 1585 aa19.68■□□□□ 0.74
TSPAN3-205ENST00000558745 USP32Q8NFA0 1604 aa19.68■□□□□ 0.74
TSPAN3-205ENST00000558745 GPRASP1Q5JY77 1395 aa19.67■□□□□ 0.74
TSPAN3-205ENST00000558745 KRT28Q7Z3Y7 464 aa19.67■□□□□ 0.74
TSPAN3-205ENST00000558745 CABP2Q9NPB3 220 aa19.67■□□□□ 0.74
TSPAN3-205ENST00000558745 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
TSPAN3-205ENST00000558745 RALGAPBQ86X10 1494 aa19.66■□□□□ 0.74
TSPAN3-205ENST00000558745 SRPK2P78362 688 aaKnown RBP19.65■□□□□ 0.74
TSPAN3-205ENST00000558745 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
TSPAN3-205ENST00000558745 PSME1Q06323 249 aa19.64■□□□□ 0.73
TSPAN3-205ENST00000558745 PXDNQ92626 1479 aa19.64■□□□□ 0.73
TSPAN3-205ENST00000558745 TULP4Q9NRJ4 1543 aa19.64■□□□□ 0.73
TSPAN3-205ENST00000558745 PLEKHG5O94827 1062 aa19.63■□□□□ 0.73
TSPAN3-205ENST00000558745 PNPLA6Q8IY17 1366 aa19.63■□□□□ 0.73
TSPAN3-205ENST00000558745 UPF1Q92900 1129 aaKnown RBP eCLIP19.63■□□□□ 0.733e-8■■■□□ 17.8
TSPAN3-205ENST00000558745 TIMELESSQ9UNS1 1208 aa19.63■□□□□ 0.73
TSPAN3-205ENST00000558745 QRICH2Q9H0J4 1663 aa19.62■□□□□ 0.73
TSPAN3-205ENST00000558745 LRP6O75581 1613 aa19.62■□□□□ 0.73
TSPAN3-205ENST00000558745 SPATA31A6Q5VVP1 1343 aa19.61■□□□□ 0.73
TSPAN3-205ENST00000558745 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-205ENST00000558745 ATP7BP35670 1465 aa19.61■□□□□ 0.73
TSPAN3-205ENST00000558745 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-205ENST00000558745 SHPRHQ149N8 1683 aa19.59■□□□□ 0.73
TSPAN3-205ENST00000558745 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
TSPAN3-205ENST00000558745 KIF1AQ12756 1690 aa19.59■□□□□ 0.73
TSPAN3-205ENST00000558745 SPATA31A3Q5VYP0 1347 aa19.58■□□□□ 0.73
TSPAN3-205ENST00000558745 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.73
TSPAN3-205ENST00000558745 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.73
TSPAN3-205ENST00000558745 LMOD2Q6P5Q4 547 aa19.58■□□□□ 0.73
TSPAN3-205ENST00000558745 EVC2Q86UK5 1308 aa19.57■□□□□ 0.72
TSPAN3-205ENST00000558745 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
TSPAN3-205ENST00000558745 ACEP12821 1306 aa19.57■□□□□ 0.72
TSPAN3-205ENST00000558745 CABP1Q9NZU7 370 aa19.56■□□□□ 0.72
TSPAN3-205ENST00000558745 PLEKHG3A1L390 1219 aa19.55■□□□□ 0.72
TSPAN3-205ENST00000558745 CABLES1Q8TDN4 633 aa19.55■□□□□ 0.72
TSPAN3-205ENST00000558745 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-205ENST00000558745 PPIP5K1Q6PFW1 1433 aa19.54■□□□□ 0.72
TSPAN3-205ENST00000558745 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
TSPAN3-205ENST00000558745 TESK2Q96S53 571 aa19.52■□□□□ 0.72
TSPAN3-205ENST00000558745 ZNF772Q68DY9 489 aaPredicted RBP19.51■□□□□ 0.71
TSPAN3-205ENST00000558745 SBNO1A3KN83 1393 aa19.51■□□□□ 0.71
TSPAN3-205ENST00000558745 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
TSPAN3-205ENST00000558745 USP47Q96K76 1375 aa19.51■□□□□ 0.71
TSPAN3-205ENST00000558745 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
TSPAN3-205ENST00000558745 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
TSPAN3-205ENST00000558745 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
TSPAN3-205ENST00000558745 ITSN1Q15811 1721 aa19.49■□□□□ 0.71
TSPAN3-205ENST00000558745 SBNO2Q9Y2G9 1366 aa19.48■□□□□ 0.71
TSPAN3-205ENST00000558745 SRCAPQ6ZRS2 3230 aa19.48■□□□□ 0.71
TSPAN3-205ENST00000558745 NGLY1Q96IV0 654 aa19.48■□□□□ 0.71
TSPAN3-205ENST00000558745 COL22A1Q8NFW1 1626 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-205ENST00000558745 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms