RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ADAMTS2O95450 1211 aa17.2■□□□□ 0.34
CASC4-205ENST00000558735 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
CASC4-205ENST00000558735 ATRNO75882 1429 aa17.2■□□□□ 0.34
CASC4-205ENST00000558735 USP21Q9UK80 565 aa17.19■□□□□ 0.34
CASC4-205ENST00000558735 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
CASC4-205ENST00000558735 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
CASC4-205ENST00000558735 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
CASC4-205ENST00000558735 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
CASC4-205ENST00000558735 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
CASC4-205ENST00000558735 MYOM2P54296 1465 aa17.16■□□□□ 0.34
CASC4-205ENST00000558735 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
CASC4-205ENST00000558735 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
CASC4-205ENST00000558735 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
CASC4-205ENST00000558735 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CASC4-205ENST00000558735 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
CASC4-205ENST00000558735 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
CASC4-205ENST00000558735 PXDNQ92626 1479 aa17.11■□□□□ 0.33
CASC4-205ENST00000558735 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
CASC4-205ENST00000558735 STK26Q9P289 416 aa17.09■□□□□ 0.33
CASC4-205ENST00000558735 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
CASC4-205ENST00000558735 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
CASC4-205ENST00000558735 PPLO60437 1756 aa17.08■□□□□ 0.33
CASC4-205ENST00000558735 WAPLQ7Z5K2 1190 aa17.08■□□□□ 0.32
CASC4-205ENST00000558735 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
CASC4-205ENST00000558735 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
CASC4-205ENST00000558735 ESCO1Q5FWF5 840 aa17.05■□□□□ 0.32
CASC4-205ENST00000558735 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
CASC4-205ENST00000558735 MARF1Q9Y4F3 1742 aaKnown RBP17.04■□□□□ 0.32
CASC4-205ENST00000558735 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
CASC4-205ENST00000558735 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
CASC4-205ENST00000558735 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
CASC4-205ENST00000558735 TECPR2O15040 1411 aa17.04■□□□□ 0.32
CASC4-205ENST00000558735 SLIT2O94813 1529 aa17.03■□□□□ 0.32
CASC4-205ENST00000558735 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
CASC4-205ENST00000558735 FOXO3O43524 673 aa17.02■□□□□ 0.32
CASC4-205ENST00000558735 CFAP70Q5T0N1 1121 aa17.02■□□□□ 0.32
CASC4-205ENST00000558735 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
CASC4-205ENST00000558735 RALGAPBQ86X10 1494 aa17.01■□□□□ 0.31
CASC4-205ENST00000558735 SIRT1Q96EB6 747 aa17.01■□□□□ 0.31
CASC4-205ENST00000558735 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
CASC4-205ENST00000558735 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
CASC4-205ENST00000558735 NUTM2FA1L443 756 aa17■□□□□ 0.31
CASC4-205ENST00000558735 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
CASC4-205ENST00000558735 GLI3P10071 1580 aa16.99■□□□□ 0.31
CASC4-205ENST00000558735 HRCP23327 699 aa16.99■□□□□ 0.31
CASC4-205ENST00000558735 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
CASC4-205ENST00000558735 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
CASC4-205ENST00000558735 IFT172Q9UG01 1749 aa16.97■□□□□ 0.31
CASC4-205ENST00000558735 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
CASC4-205ENST00000558735 NRXN1Q9ULB1 1477 aa16.95■□□□□ 0.3
CASC4-205ENST00000558735 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
CASC4-205ENST00000558735 VPS72Q15906 364 aa16.94■□□□□ 0.3
CASC4-205ENST00000558735 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
CASC4-205ENST00000558735 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
CASC4-205ENST00000558735 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
CASC4-205ENST00000558735 LRP5O75197 1615 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 DEFB132Q7Z7B7 95 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 FMN2Q9NZ56 1722 aa16.92■□□□□ 0.3
CASC4-205ENST00000558735 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
CASC4-205ENST00000558735 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
CASC4-205ENST00000558735 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
CASC4-205ENST00000558735 SBNO1A3KN83 1393 aa16.89■□□□□ 0.3
CASC4-205ENST00000558735 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
CASC4-205ENST00000558735 NWD2Q9ULI1 1742 aa16.89■□□□□ 0.29
CASC4-205ENST00000558735 PSME1Q06323 249 aa16.88■□□□□ 0.29
CASC4-205ENST00000558735 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
CASC4-205ENST00000558735 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
CASC4-205ENST00000558735 POGKQ9P215 609 aa16.88■□□□□ 0.29
CASC4-205ENST00000558735 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
CASC4-205ENST00000558735 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
CASC4-205ENST00000558735 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
CASC4-205ENST00000558735 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
CASC4-205ENST00000558735 FAM83GA6ND36 823 aa16.83■□□□□ 0.28
CASC4-205ENST00000558735 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.28
CASC4-205ENST00000558735 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
CASC4-205ENST00000558735 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
CASC4-205ENST00000558735 BAG6P46379 1132 aa16.82■□□□□ 0.28
CASC4-205ENST00000558735 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
CASC4-205ENST00000558735 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
CASC4-205ENST00000558735 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
CASC4-205ENST00000558735 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
CASC4-205ENST00000558735 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
CASC4-205ENST00000558735 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
CASC4-205ENST00000558735 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
CASC4-205ENST00000558735 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
CASC4-205ENST00000558735 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
CASC4-205ENST00000558735 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
CASC4-205ENST00000558735 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
CASC4-205ENST00000558735 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
CASC4-205ENST00000558735 LMOD2Q6P5Q4 547 aa16.77■□□□□ 0.28
CASC4-205ENST00000558735 PSDA5PKW4 1024 aaPredicted RBP16.76■□□□□ 0.27
CASC4-205ENST00000558735 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
CASC4-205ENST00000558735 FAM98CQ17RN3 349 aaKnown RBP16.76■□□□□ 0.27
CASC4-205ENST00000558735 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
CASC4-205ENST00000558735 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms