RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 WDR63Q8IWG1 891 aa19.4■□□□□ 0.7
AP4E1-202ENST00000558439 COG3Q96JB2 828 aa19.4■□□□□ 0.7
AP4E1-202ENST00000558439 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
AP4E1-202ENST00000558439 COL17A1Q9UMD9 1497 aaPredicted RBP19.4■□□□□ 0.7
AP4E1-202ENST00000558439 FANCAO15360 1455 aa19.39■□□□□ 0.7
AP4E1-202ENST00000558439 NKTRP30414 1462 aaKnown RBP19.39■□□□□ 0.7
AP4E1-202ENST00000558439 FAM69CQ0P6D2 419 aa19.39■□□□□ 0.69
AP4E1-202ENST00000558439 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.69
AP4E1-202ENST00000558439 TNNQ9UQP3 1299 aa19.39■□□□□ 0.69
AP4E1-202ENST00000558439 DUOX2Q9NRD8 1548 aa19.39■□□□□ 0.69
AP4E1-202ENST00000558439 C22orf23Q9BZE7 217 aa19.38■□□□□ 0.69
AP4E1-202ENST00000558439 CDK19Q9BWU1 502 aa19.38■□□□□ 0.69
AP4E1-202ENST00000558439 FBLN1P23142 703 aa19.38■□□□□ 0.69
AP4E1-202ENST00000558439 IDI1Q13907 227 aa19.38■□□□□ 0.69
AP4E1-202ENST00000558439 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
AP4E1-202ENST00000558439 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
AP4E1-202ENST00000558439 KDM5CP41229 1560 aa19.37■□□□□ 0.69
AP4E1-202ENST00000558439 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
AP4E1-202ENST00000558439 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
AP4E1-202ENST00000558439 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
AP4E1-202ENST00000558439 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
AP4E1-202ENST00000558439 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
AP4E1-202ENST00000558439 NAP1L5Q96NT1 182 aaPredicted RBP19.34■□□□□ 0.69
AP4E1-202ENST00000558439 KIF16BQ96L93 1317 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 ATF7IPQ6VMQ6 1270 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.69
AP4E1-202ENST00000558439 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.68
AP4E1-202ENST00000558439 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
AP4E1-202ENST00000558439 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.68
AP4E1-202ENST00000558439 ASXL1Q8IXJ9 1541 aa19.32■□□□□ 0.68
AP4E1-202ENST00000558439 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
AP4E1-202ENST00000558439 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
AP4E1-202ENST00000558439 PCDHB15Q9Y5E8 787 aa19.32■□□□□ 0.68
AP4E1-202ENST00000558439 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
AP4E1-202ENST00000558439 HAP1P54257 671 aaPredicted RBP19.31■□□□□ 0.68
AP4E1-202ENST00000558439 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
AP4E1-202ENST00000558439 C8orf34Q49A92 452 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 RPGRIP1LQ68CZ1 1315 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 AMPHP49418 695 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 TMEM57Q8N5G2 664 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 GBP4Q96PP9 640 aa19.3■□□□□ 0.68
AP4E1-202ENST00000558439 NOL8Q76FK4 1167 aaKnown RBP19.29■□□□□ 0.68
AP4E1-202ENST00000558439 RLBP1P12271 317 aa19.29■□□□□ 0.68
AP4E1-202ENST00000558439 PLA2R1Q13018 1463 aa19.29■□□□□ 0.68
AP4E1-202ENST00000558439 AAMPQ13685 434 aa19.29■□□□□ 0.68
AP4E1-202ENST00000558439 GNAI1P63096 354 aa19.28■□□□□ 0.68
AP4E1-202ENST00000558439 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
AP4E1-202ENST00000558439 ABCA8O94911 1581 aa19.28■□□□□ 0.68
AP4E1-202ENST00000558439 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
AP4E1-202ENST00000558439 FOXD4L5Q5VV16 416 aaPredicted RBP19.27■□□□□ 0.68
AP4E1-202ENST00000558439 FOXD4L4Q8WXT5 416 aaPredicted RBP19.27■□□□□ 0.68
AP4E1-202ENST00000558439 STK31Q9BXU1 1019 aa19.27■□□□□ 0.67
AP4E1-202ENST00000558439 MAGI2Q86UL8 1455 aa19.26■□□□□ 0.67
AP4E1-202ENST00000558439 CHMP5Q9NZZ3 219 aa19.26■□□□□ 0.67
AP4E1-202ENST00000558439 TRIM27P14373 513 aa19.25■□□□□ 0.67
AP4E1-202ENST00000558439 TRIM6-TRIM34B2RNG4 842 aa19.25■□□□□ 0.67
AP4E1-202ENST00000558439 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
AP4E1-202ENST00000558439 SEC24BO95487 1268 aa19.25■□□□□ 0.67
AP4E1-202ENST00000558439 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
AP4E1-202ENST00000558439 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
AP4E1-202ENST00000558439 DCTN1Q14203 1278 aa19.23■□□□□ 0.67
AP4E1-202ENST00000558439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.23■□□□□ 0.67
AP4E1-202ENST00000558439 ABCC2Q92887 1545 aa19.22■□□□□ 0.67
AP4E1-202ENST00000558439 NUTM2GQ5VZR2 741 aa19.22■□□□□ 0.67
AP4E1-202ENST00000558439 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
AP4E1-202ENST00000558439 EMILIN1Q9Y6C2 1016 aa19.22■□□□□ 0.67
AP4E1-202ENST00000558439 BLMP54132 1417 aaPredicted RBP19.21■□□□□ 0.67
AP4E1-202ENST00000558439 PIK3C2GO75747 1445 aa19.21■□□□□ 0.67
AP4E1-202ENST00000558439 KDM2BQ8NHM5 1336 aa19.21■□□□□ 0.67
AP4E1-202ENST00000558439 HMMRO75330 724 aa19.21■□□□□ 0.67
AP4E1-202ENST00000558439 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
AP4E1-202ENST00000558439 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
AP4E1-202ENST00000558439 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
AP4E1-202ENST00000558439 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
AP4E1-202ENST00000558439 FYB1O15117 783 aa19.19■□□□□ 0.66
AP4E1-202ENST00000558439 NME9Q86XW9 330 aa19.19■□□□□ 0.66
AP4E1-202ENST00000558439 FCHSD2O94868 740 aa19.19■□□□□ 0.66
AP4E1-202ENST00000558439 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
AP4E1-202ENST00000558439 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
AP4E1-202ENST00000558439 CFAP65Q6ZU64 1925 aaKnown RBP19.19■□□□□ 0.66
AP4E1-202ENST00000558439 FOXD4L6Q3SYB3 417 aaPredicted RBP19.18■□□□□ 0.66
AP4E1-202ENST00000558439 FOXD4L3Q6VB84 417 aaPredicted RBP19.18■□□□□ 0.66
AP4E1-202ENST00000558439 ATAD2Q6PL18 1390 aa19.18■□□□□ 0.66
AP4E1-202ENST00000558439 PLCB2Q00722 1185 aa19.18■□□□□ 0.66
AP4E1-202ENST00000558439 RILPL2Q969X0 211 aa19.18■□□□□ 0.66
AP4E1-202ENST00000558439 PTMAP06454 111 aaKnown RBP19.18■□□□□ 0.66
AP4E1-202ENST00000558439 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
AP4E1-202ENST00000558439 POLR3AO14802 1390 aaPredicted RBP19.17■□□□□ 0.66
AP4E1-202ENST00000558439 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
AP4E1-202ENST00000558439 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
AP4E1-202ENST00000558439 TBC1D2Q9BYX2 928 aa19.17■□□□□ 0.66
AP4E1-202ENST00000558439 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
AP4E1-202ENST00000558439 DDX11L8A8MPP1 907 aa19.16■□□□□ 0.66
AP4E1-202ENST00000558439 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
AP4E1-202ENST00000558439 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
AP4E1-202ENST00000558439 KCNJ4P48050 445 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms