RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 SDF4Q9BRK5 362 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 PRIMPOLQ96LW4 560 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 AKAP17AQ02040 695 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 UBXN4Q92575 508 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 PANK3Q9H999 370 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 PLCD4Q9BRC7 762 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 CARMIL2Q6F5E8 1435 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 STK11IPQ8N1F8 1099 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 DDX11Q96FC9 970 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 K7ELQ4 463 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 NEXNQ0ZGT2 675 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 NBPF1Q3BBV0 1214 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 APAF1O14727 1248 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 KINO60870 393 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
CSPG4P12-201ENST00000558282 NPHP1O15259 732 aa14.08□□□□□ -0.15
CSPG4P12-201ENST00000558282 NUP155O75694 1391 aa14.08□□□□□ -0.15
CSPG4P12-201ENST00000558282 PDILTQ8N807 584 aa14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 USP47Q96K76 1375 aa14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 CPLX1O14810 134 aa14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
CSPG4P12-201ENST00000558282 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 SMC2O95347 1197 aa14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 FILIP1Q7Z7B0 1213 aa14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 PDIA4P13667 645 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-201ENST00000558282 SHTN1A0MZ66 631 aa14.06□□□□□ -0.16
CSPG4P12-201ENST00000558282 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
CSPG4P12-201ENST00000558282 FILIP1LQ4L180 1135 aa14.06□□□□□ -0.16
CSPG4P12-201ENST00000558282 CTR9Q6PD62 1173 aa14.06□□□□□ -0.16
CSPG4P12-201ENST00000558282 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-201ENST00000558282 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
CSPG4P12-201ENST00000558282 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
CSPG4P12-201ENST00000558282 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-201ENST00000558282 PSMA5P28066 241 aa14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 CBFA2T2O43439 604 aa14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
CSPG4P12-201ENST00000558282 ERLIN2O94905 339 aa14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 MARCH6O60337 910 aa14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 HSP90AB4PQ58FF6 505 aa14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 LRRCC1Q9C099 1032 aa14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 SMAP1Q8IYB5 467 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 KIF18AQ8NI77 898 aa14.03□□□□□ -0.16
CSPG4P12-201ENST00000558282 GPATCH11Q8N954 259 aa14.02□□□□□ -0.16
CSPG4P12-201ENST00000558282 CCDC102AQ96A19 550 aa14.02□□□□□ -0.16
CSPG4P12-201ENST00000558282 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P12-201ENST00000558282 TXLNBQ8N3L3 684 aa14.02□□□□□ -0.16
CSPG4P12-201ENST00000558282 MICALCLQ6ZW33 695 aa14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 ERC2O15083 957 aa14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 NEK4P51957 841 aa14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 PTPN14Q15678 1187 aa14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 TTLL5Q6EMB2 1281 aa14.02□□□□□ -0.17
CSPG4P12-201ENST00000558282 NEFHP12036 1026 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 GCC1Q96CN9 775 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 CFTRP13569 1480 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 BMS1Q14692 1282 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 XPCQ01831 940 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-201ENST00000558282 MCM3P25205 808 aa14□□□□□ -0.17
CSPG4P12-201ENST00000558282 FIBPO43427 364 aa14□□□□□ -0.17
CSPG4P12-201ENST00000558282 NEMFO60524 1076 aa14□□□□□ -0.17
CSPG4P12-201ENST00000558282 PANK1Q8TE04 598 aa14□□□□□ -0.17
CSPG4P12-201ENST00000558282 CENPHQ9H3R5 247 aa14□□□□□ -0.17
CSPG4P12-201ENST00000558282 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 KRT222Q8N1A0 295 aa13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 FBXW7Q969H0 707 aa13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 MAP9Q49MG5 647 aa13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 KRT85P78386 507 aa13.99□□□□□ -0.17
CSPG4P12-201ENST00000558282 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 SKIDA1Q1XH10 827 aa13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 CRACR2AQ9BSW2 395 aa13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 KIF20AO95235 890 aa13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 GTF2F1P35269 517 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSPG4P12-201ENST00000558282 TRDNQ13061 729 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 LUC7LQ9NQ29 371 aaKnown RBP13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 SERPINC1P01008 464 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms