RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
SPG11-209ENST00000558253 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
SPG11-209ENST00000558253 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
SPG11-209ENST00000558253 KIF1BO60333 1816 aa11.08□□□□□ -0.64
SPG11-209ENST00000558253 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
SPG11-209ENST00000558253 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
SPG11-209ENST00000558253 PIK3C2GO75747 1445 aa11.07□□□□□ -0.64
SPG11-209ENST00000558253 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
SPG11-209ENST00000558253 GLI2P10070 1586 aa11.07□□□□□ -0.64
SPG11-209ENST00000558253 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
SPG11-209ENST00000558253 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
SPG11-209ENST00000558253 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
SPG11-209ENST00000558253 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
SPG11-209ENST00000558253 NOS1P29475 1434 aa11.05□□□□□ -0.64
SPG11-209ENST00000558253 NPATQ14207 1427 aa11.05□□□□□ -0.64
SPG11-209ENST00000558253 AMER1Q5JTC6 1135 aaPredicted RBP11.05□□□□□ -0.64
SPG11-209ENST00000558253 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
SPG11-209ENST00000558253 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
SPG11-209ENST00000558253 SLC52A1Q9NWF4 448 aa11.05□□□□□ -0.64
SPG11-209ENST00000558253 ABCC3O15438 1527 aa11.04□□□□□ -0.64
SPG11-209ENST00000558253 ZFYVE9O95405 1425 aa11.04□□□□□ -0.64
SPG11-209ENST00000558253 CC2D1BQ5T0F9 858 aaKnown RBP11.04□□□□□ -0.64
SPG11-209ENST00000558253 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
SPG11-209ENST00000558253 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
SPG11-209ENST00000558253 MYO3AQ8NEV4 1616 aa11.03□□□□□ -0.64
SPG11-209ENST00000558253 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
SPG11-209ENST00000558253 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
SPG11-209ENST00000558253 CIZ1Q9ULV3 898 aaPredicted RBP11.03□□□□□ -0.64
SPG11-209ENST00000558253 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
SPG11-209ENST00000558253 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
SPG11-209ENST00000558253 ZC3H13Q5T200 1668 aaKnown RBP11.03□□□□□ -0.64
SPG11-209ENST00000558253 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
SPG11-209ENST00000558253 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPG11-209ENST00000558253 CFAP70Q5T0N1 1121 aa11.02□□□□□ -0.65
SPG11-209ENST00000558253 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.65
SPG11-209ENST00000558253 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
SPG11-209ENST00000558253 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
SPG11-209ENST00000558253 GGT6Q6P531 493 aa11.01□□□□□ -0.65
SPG11-209ENST00000558253 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
SPG11-209ENST00000558253 FANCIQ9NVI1 1328 aa11.01□□□□□ -0.65
SPG11-209ENST00000558253 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
SPG11-209ENST00000558253 ERVK-7P63135 1459 aa11□□□□□ -0.65
SPG11-209ENST00000558253 MAP3K13O43283 966 aa10.99□□□□□ -0.65
SPG11-209ENST00000558253 RRP1P56182 461 aaKnown RBP10.99□□□□□ -0.65
SPG11-209ENST00000558253 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
SPG11-209ENST00000558253 CCDC136Q96JN2 1154 aa10.99□□□□□ -0.65
SPG11-209ENST00000558253 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
SPG11-209ENST00000558253 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
SPG11-209ENST00000558253 PYGBP11216 843 aa10.98□□□□□ -0.65
SPG11-209ENST00000558253 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
SPG11-209ENST00000558253 CAMSAP1Q5T5Y3 1602 aa10.98□□□□□ -0.65
SPG11-209ENST00000558253 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
SPG11-209ENST00000558253 ADAMTS8Q9UP79 889 aa10.97□□□□□ -0.65
SPG11-209ENST00000558253 NSD2O96028 1365 aa10.97□□□□□ -0.65
SPG11-209ENST00000558253 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
SPG11-209ENST00000558253 REREQ9P2R6 1566 aa10.97□□□□□ -0.65
SPG11-209ENST00000558253 PPLO60437 1756 aa10.97□□□□□ -0.65
SPG11-209ENST00000558253 ADGRB1O14514 1584 aa10.96□□□□□ -0.65
SPG11-209ENST00000558253 POLR3AO14802 1390 aaPredicted RBP10.96□□□□□ -0.65
SPG11-209ENST00000558253 EVC2Q86UK5 1308 aa10.96□□□□□ -0.65
SPG11-209ENST00000558253 RAPGEF3O95398 923 aa10.96□□□□□ -0.65
SPG11-209ENST00000558253 RICTORQ6R327 1708 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 AGLP35573 1532 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
SPG11-209ENST00000558253 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
SPG11-209ENST00000558253 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
SPG11-209ENST00000558253 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
SPG11-209ENST00000558253 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
SPG11-209ENST00000558253 MYOM1P52179 1685 aa10.94□□□□□ -0.66
SPG11-209ENST00000558253 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
SPG11-209ENST00000558253 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
SPG11-209ENST00000558253 IDI1Q13907 227 aa10.92□□□□□ -0.66
SPG11-209ENST00000558253 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
SPG11-209ENST00000558253 NEXMIFQ5QGS0 1516 aa10.92□□□□□ -0.66
SPG11-209ENST00000558253 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
SPG11-209ENST00000558253 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
SPG11-209ENST00000558253 TRAK1Q9UPV9 953 aa10.91□□□□□ -0.66
SPG11-209ENST00000558253 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
SPG11-209ENST00000558253 E9PSI1 815 aa10.9□□□□□ -0.66
SPG11-209ENST00000558253 TCERG1O14776 1098 aaKnown RBP10.9□□□□□ -0.66
SPG11-209ENST00000558253 MS4A1P11836 297 aa10.9□□□□□ -0.66
SPG11-209ENST00000558253 MORC1Q86VD1 984 aa10.9□□□□□ -0.66
SPG11-209ENST00000558253 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
SPG11-209ENST00000558253 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.67
SPG11-209ENST00000558253 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
SPG11-209ENST00000558253 FAM69CQ0P6D2 419 aa10.89□□□□□ -0.67
SPG11-209ENST00000558253 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
SPG11-209ENST00000558253 QRICH2Q9H0J4 1663 aa10.89□□□□□ -0.67
SPG11-209ENST00000558253 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
SPG11-209ENST00000558253 AAMPQ13685 434 aa10.88□□□□□ -0.67
SPG11-209ENST00000558253 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
SPG11-209ENST00000558253 YEATS2Q9ULM3 1422 aa10.88□□□□□ -0.67
SPG11-209ENST00000558253 NSD3Q9BZ95 1437 aa10.87□□□□□ -0.67
SPG11-209ENST00000558253 CCDC27Q2M243 656 aa10.87□□□□□ -0.67
SPG11-209ENST00000558253 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
SPG11-209ENST00000558253 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
SPG11-209ENST00000558253 TERF2IPQ9NYB0 399 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms