RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 NUTM2AQ8IVF1 878 aaPredicted RBP24.47■■□□□ 1.51
RPL28-205ENST00000558131 PXDNQ92626 1479 aa24.46■■□□□ 1.51
RPL28-205ENST00000558131 CDK12Q9NYV4 1490 aaPredicted RBP24.46■■□□□ 1.51
RPL28-205ENST00000558131 MARF1Q9Y4F3 1742 aaKnown RBP24.46■■□□□ 1.51
RPL28-205ENST00000558131 MYOM2P54296 1465 aa24.45■■□□□ 1.51
RPL28-205ENST00000558131 LRPPRCP42704 1394 aaKnown RBP24.45■■□□□ 1.5
RPL28-205ENST00000558131 AFF2P51816 1311 aa24.44■■□□□ 1.5
RPL28-205ENST00000558131 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
RPL28-205ENST00000558131 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
RPL28-205ENST00000558131 RGPD8O14715 1765 aaPredicted RBP24.42■■□□□ 1.5
RPL28-205ENST00000558131 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
RPL28-205ENST00000558131 YTHDC2Q9H6S0 1430 aaKnown RBP24.41■■□□□ 1.5
RPL28-205ENST00000558131 KIF1AQ12756 1690 aa24.4■■□□□ 1.5
RPL28-205ENST00000558131 RAB3GAP2Q9H2M9 1393 aa24.4■■□□□ 1.5
RPL28-205ENST00000558131 RGS12O14924 1447 aa24.38■■□□□ 1.49
RPL28-205ENST00000558131 TMEM132EQ6IEE7 984 aa24.37■■□□□ 1.49
RPL28-205ENST00000558131 WAPLQ7Z5K2 1190 aa24.37■■□□□ 1.49
RPL28-205ENST00000558131 C8orf37Q96NL8 207 aa24.35■■□□□ 1.49
RPL28-205ENST00000558131 ADGRB1O14514 1584 aa24.34■■□□□ 1.49
RPL28-205ENST00000558131 RXRBP28702 533 aa24.34■■□□□ 1.49
RPL28-205ENST00000558131 STK26Q9P289 416 aa24.34■■□□□ 1.49
RPL28-205ENST00000558131 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
RPL28-205ENST00000558131 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
RPL28-205ENST00000558131 UPF1Q92900 1129 aaKnown RBP eCLIP24.32■■□□□ 1.48
RPL28-205ENST00000558131 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
RPL28-205ENST00000558131 NPHP3Q7Z494 1330 aa24.32■■□□□ 1.48
RPL28-205ENST00000558131 DLC1Q96QB1 1528 aa24.31■■□□□ 1.48
RPL28-205ENST00000558131 ABCA3Q99758 1704 aa24.31■■□□□ 1.48
RPL28-205ENST00000558131 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
RPL28-205ENST00000558131 C14orf93Q9H972 538 aaKnown RBP24.31■■□□□ 1.48
RPL28-205ENST00000558131 EP400Q96L91 3159 aa24.31■■□□□ 1.48
RPL28-205ENST00000558131 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
RPL28-205ENST00000558131 ADAMTS2O95450 1211 aa24.29■■□□□ 1.48
RPL28-205ENST00000558131 CFAP70Q5T0N1 1121 aa24.27■■□□□ 1.48
RPL28-205ENST00000558131 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
RPL28-205ENST00000558131 FOXO3O43524 673 aa24.26■■□□□ 1.47
RPL28-205ENST00000558131 SIRT1Q96EB6 747 aa24.26■■□□□ 1.47
RPL28-205ENST00000558131 QTRT2Q9H974 415 aaKnown RBP24.26■■□□□ 1.47
RPL28-205ENST00000558131 ATRNO75882 1429 aa24.26■■□□□ 1.47
RPL28-205ENST00000558131 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
RPL28-205ENST00000558131 XPCQ01831 940 aaPredicted RBP24.25■■□□□ 1.47
RPL28-205ENST00000558131 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
RPL28-205ENST00000558131 FNBP4Q8N3X1 1017 aaPredicted RBP24.24■■□□□ 1.47
RPL28-205ENST00000558131 NGLY1Q96IV0 654 aa24.23■■□□□ 1.47
RPL28-205ENST00000558131 ARHGEF28Q8N1W1 1705 aaKnown RBP24.22■■□□□ 1.47
RPL28-205ENST00000558131 TRPM3Q9HCF6 1732 aaPredicted RBP24.22■■□□□ 1.47
RPL28-205ENST00000558131 DHX57Q6P158 1386 aaKnown RBP24.22■■□□□ 1.47
RPL28-205ENST00000558131 PLCH1Q4KWH8 1693 aa24.2■■□□□ 1.46
RPL28-205ENST00000558131 SPATA31A3Q5VYP0 1347 aa24.19■■□□□ 1.46
RPL28-205ENST00000558131 USP21Q9UK80 565 aa24.19■■□□□ 1.46
RPL28-205ENST00000558131 GLI3P10071 1580 aa24.18■■□□□ 1.46
RPL28-205ENST00000558131 SLIT2O94813 1529 aa24.18■■□□□ 1.46
RPL28-205ENST00000558131 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
RPL28-205ENST00000558131 PRAM1Q96QH2 718 aa24.17■■□□□ 1.46
RPL28-205ENST00000558131 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
RPL28-205ENST00000558131 CRYBG1Q9Y4K1 1723 aa24.16■■□□□ 1.46
RPL28-205ENST00000558131 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
RPL28-205ENST00000558131 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
RPL28-205ENST00000558131 TRPC5Q9UL62 973 aaPredicted RBP24.15■■□□□ 1.46
RPL28-205ENST00000558131 TULP4Q9NRJ4 1543 aa24.13■■□□□ 1.45
RPL28-205ENST00000558131 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
RPL28-205ENST00000558131 PHF8Q9UPP1 1060 aa24.12■■□□□ 1.45
RPL28-205ENST00000558131 BRWD3Q6RI45 1802 aa24.12■■□□□ 1.45
RPL28-205ENST00000558131 NRAPQ86VF7 1730 aa24.11■■□□□ 1.45
RPL28-205ENST00000558131 KIAA1210Q9ULL0 1709 aa24.1■■□□□ 1.45
RPL28-205ENST00000558131 HRCP23327 699 aa24.1■■□□□ 1.45
RPL28-205ENST00000558131 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
RPL28-205ENST00000558131 SBNO1A3KN83 1393 aa24.1■■□□□ 1.45
RPL28-205ENST00000558131 ITSN1Q15811 1721 aa24.1■■□□□ 1.45
RPL28-205ENST00000558131 TOPAZ1Q8N9V7 1692 aa24.08■■□□□ 1.45
RPL28-205ENST00000558131 RALGAPBQ86X10 1494 aa24.08■■□□□ 1.45
RPL28-205ENST00000558131 ATAD2Q6PL18 1390 aa24.07■■□□□ 1.44
RPL28-205ENST00000558131 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
RPL28-205ENST00000558131 DCAF11Q8TEB1 546 aa24.06■■□□□ 1.44
RPL28-205ENST00000558131 TRAK1Q9UPV9 953 aa24.06■■□□□ 1.44
RPL28-205ENST00000558131 ATP7BP35670 1465 aa24.05■■□□□ 1.44
RPL28-205ENST00000558131 SRCAPQ6ZRS2 3230 aa24.05■■□□□ 1.44
RPL28-205ENST00000558131 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
RPL28-205ENST00000558131 POGKQ9P215 609 aa24.03■■□□□ 1.44
RPL28-205ENST00000558131 KDM2AQ9Y2K7 1162 aa24.03■■□□□ 1.44
RPL28-205ENST00000558131 CABLES1Q8TDN4 633 aa24.02■■□□□ 1.44
RPL28-205ENST00000558131 GJD4Q96KN9 370 aaPredicted RBP24.02■■□□□ 1.44
RPL28-205ENST00000558131 ARHGEF10O15013 1369 aa24.02■■□□□ 1.44
RPL28-205ENST00000558131 UNC5CLQ8IV45 518 aa24.01■■□□□ 1.43
RPL28-205ENST00000558131 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
RPL28-205ENST00000558131 MINK1Q8N4C8 1332 aaPredicted RBP24.01■■□□□ 1.43
RPL28-205ENST00000558131 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
RPL28-205ENST00000558131 STAC3Q96MF2 364 aa24■■□□□ 1.43
RPL28-205ENST00000558131 COL14A1Q05707 1796 aaKnown RBP23.99■■□□□ 1.43
RPL28-205ENST00000558131 PSME1Q06323 249 aa23.99■■□□□ 1.43
RPL28-205ENST00000558131 EIF3AQ14152 1382 aaKnown RBP23.99■■□□□ 1.43
RPL28-205ENST00000558131 WASLO00401 505 aaPredicted RBP23.97■■□□□ 1.43
RPL28-205ENST00000558131 VPS72Q15906 364 aa23.91■■□□□ 1.42
RPL28-205ENST00000558131 QRICH2Q9H0J4 1663 aa23.9■■□□□ 1.42
RPL28-205ENST00000558131 GPRASP1Q5JY77 1395 aa23.9■■□□□ 1.42
RPL28-205ENST00000558131 FAM83GA6ND36 823 aa23.89■■□□□ 1.41
RPL28-205ENST00000558131 PLEKHG5O94827 1062 aa23.89■■□□□ 1.41
RPL28-205ENST00000558131 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.41
RPL28-205ENST00000558131 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.41
RPL28-205ENST00000558131 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms