RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
SNRPA1-206ENST00000558059 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
SNRPA1-206ENST00000558059 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
SNRPA1-206ENST00000558059 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
SNRPA1-206ENST00000558059 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-206ENST00000558059 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-206ENST00000558059 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-206ENST00000558059 MYOM2P54296 1465 aa12.9□□□□□ -0.34
SNRPA1-206ENST00000558059 AHDC1Q5TGY3 1603 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-206ENST00000558059 STK26Q9P289 416 aa12.89□□□□□ -0.35
SNRPA1-206ENST00000558059 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
SNRPA1-206ENST00000558059 TECPR2O15040 1411 aa12.88□□□□□ -0.35
SNRPA1-206ENST00000558059 CFAP70Q5T0N1 1121 aa12.88□□□□□ -0.35
SNRPA1-206ENST00000558059 JCADQ9P266 1359 aa12.87□□□□□ -0.35
SNRPA1-206ENST00000558059 WAPLQ7Z5K2 1190 aa12.87□□□□□ -0.35
SNRPA1-206ENST00000558059 KNDC1Q76NI1 1749 aa12.87□□□□□ -0.35
SNRPA1-206ENST00000558059 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-206ENST00000558059 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
SNRPA1-206ENST00000558059 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-206ENST00000558059 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-206ENST00000558059 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
SNRPA1-206ENST00000558059 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-206ENST00000558059 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
SNRPA1-206ENST00000558059 DCAF11Q8TEB1 546 aa12.85□□□□□ -0.35
SNRPA1-206ENST00000558059 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
SNRPA1-206ENST00000558059 LAMC1P11047 1609 aa12.84□□□□□ -0.35
SNRPA1-206ENST00000558059 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-206ENST00000558059 DDX17Q92841 729 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-206ENST00000558059 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
SNRPA1-206ENST00000558059 SOCS7O14512 581 aa12.83□□□□□ -0.36
SNRPA1-206ENST00000558059 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
SNRPA1-206ENST00000558059 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
SNRPA1-206ENST00000558059 SHPRHQ149N8 1683 aa12.83□□□□□ -0.36
SNRPA1-206ENST00000558059 CDC42BPGQ6DT37 1551 aa12.82□□□□□ -0.36
SNRPA1-206ENST00000558059 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
SNRPA1-206ENST00000558059 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
SNRPA1-206ENST00000558059 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-206ENST00000558059 LRP6O75581 1613 aa12.79□□□□□ -0.36
SNRPA1-206ENST00000558059 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-206ENST00000558059 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
SNRPA1-206ENST00000558059 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
SNRPA1-206ENST00000558059 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
SNRPA1-206ENST00000558059 RGPD8O14715 1765 aaPredicted RBP12.77□□□□□ -0.36
SNRPA1-206ENST00000558059 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
SNRPA1-206ENST00000558059 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNRPA1-206ENST00000558059 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
SNRPA1-206ENST00000558059 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
SNRPA1-206ENST00000558059 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
SNRPA1-206ENST00000558059 POGKQ9P215 609 aa12.76□□□□□ -0.37
SNRPA1-206ENST00000558059 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
SNRPA1-206ENST00000558059 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-206ENST00000558059 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-206ENST00000558059 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-206ENST00000558059 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
SNRPA1-206ENST00000558059 FOXO3O43524 673 aa12.74□□□□□ -0.37
SNRPA1-206ENST00000558059 POLA2Q14181 598 aa12.74□□□□□ -0.37
SNRPA1-206ENST00000558059 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
SNRPA1-206ENST00000558059 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
SNRPA1-206ENST00000558059 PXDNQ92626 1479 aa12.73□□□□□ -0.37
SNRPA1-206ENST00000558059 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-206ENST00000558059 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-206ENST00000558059 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-206ENST00000558059 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
SNRPA1-206ENST00000558059 L3MBTL2Q969R5 705 aa12.72□□□□□ -0.37
SNRPA1-206ENST00000558059 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
SNRPA1-206ENST00000558059 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-206ENST00000558059 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-206ENST00000558059 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-206ENST00000558059 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
SNRPA1-206ENST00000558059 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
SNRPA1-206ENST00000558059 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
SNRPA1-206ENST00000558059 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-206ENST00000558059 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
SNRPA1-206ENST00000558059 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-206ENST00000558059 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
SNRPA1-206ENST00000558059 ANKARQ7Z5J8 1434 aa12.69□□□□□ -0.38
SNRPA1-206ENST00000558059 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-206ENST00000558059 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
SNRPA1-206ENST00000558059 AFF2P51816 1311 aa12.67□□□□□ -0.38
SNRPA1-206ENST00000558059 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
SNRPA1-206ENST00000558059 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
SNRPA1-206ENST00000558059 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
SNRPA1-206ENST00000558059 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
SNRPA1-206ENST00000558059 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
SNRPA1-206ENST00000558059 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
SNRPA1-206ENST00000558059 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-206ENST00000558059 PSME1Q06323 249 aa12.64□□□□□ -0.39
SNRPA1-206ENST00000558059 NGLY1Q96IV0 654 aa12.64□□□□□ -0.39
SNRPA1-206ENST00000558059 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
SNRPA1-206ENST00000558059 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
SNRPA1-206ENST00000558059 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-206ENST00000558059 NUDT16Q96DE0 195 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-206ENST00000558059 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
SNRPA1-206ENST00000558059 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 ATP7BP35670 1465 aa12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 RXRBP28702 533 aa12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 NBPF8Q3BBV2 869 aa12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-206ENST00000558059 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms