RNA–Protein interactions for RNA: ENST00000558042.1

AC090515.4-201, humanhuman

TSL 3 BASIC

Gene AC090515.4, Length 450 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090515.4-201ENST00000558042 COL16A1Q07092 1604 aaPredicted RBP23.9■■□□□ 1.42
AC090515.4-201ENST00000558042 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
AC090515.4-201ENST00000558042 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
AC090515.4-201ENST00000558042 PHLPP1O60346 1717 aa23.87■■□□□ 1.41
AC090515.4-201ENST00000558042 ADGRB2O60241 1585 aa23.87■■□□□ 1.41
AC090515.4-201ENST00000558042 JCADQ9P266 1359 aa23.84■■□□□ 1.41
AC090515.4-201ENST00000558042 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
AC090515.4-201ENST00000558042 TRAK1Q9UPV9 953 aa23.84■■□□□ 1.41
AC090515.4-201ENST00000558042 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
AC090515.4-201ENST00000558042 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
AC090515.4-201ENST00000558042 NBPF1Q3BBV0 1214 aa23.82■■□□□ 1.4
AC090515.4-201ENST00000558042 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
AC090515.4-201ENST00000558042 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
AC090515.4-201ENST00000558042 ORAI2Q96SN7 254 aa23.81■■□□□ 1.4
AC090515.4-201ENST00000558042 POGKQ9P215 609 aa23.81■■□□□ 1.4
AC090515.4-201ENST00000558042 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
AC090515.4-201ENST00000558042 SOS2Q07890 1332 aaPredicted RBP23.79■■□□□ 1.4
AC090515.4-201ENST00000558042 GPRASP1Q5JY77 1395 aa23.78■■□□□ 1.4
AC090515.4-201ENST00000558042 TRPM1Q7Z4N2 1603 aa23.78■■□□□ 1.4
AC090515.4-201ENST00000558042 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
AC090515.4-201ENST00000558042 SHPRHQ149N8 1683 aa23.76■■□□□ 1.39
AC090515.4-201ENST00000558042 DISP3Q9P2K9 1392 aa23.76■■□□□ 1.39
AC090515.4-201ENST00000558042 LRRC59Q96AG4 307 aaKnown RBP23.75■■□□□ 1.39
AC090515.4-201ENST00000558042 SPATA31A6Q5VVP1 1343 aa23.75■■□□□ 1.39
AC090515.4-201ENST00000558042 SAFB2Q14151 953 aaKnown RBP eCLIP23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 NBPF8Q3BBV2 869 aa23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 EIF3AQ14152 1382 aaKnown RBP23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 TONSLQ96HA7 1378 aa23.74■■□□□ 1.39
AC090515.4-201ENST00000558042 WASLO00401 505 aaPredicted RBP23.72■■□□□ 1.39
AC090515.4-201ENST00000558042 PXDNQ92626 1479 aa23.72■■□□□ 1.39
AC090515.4-201ENST00000558042 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
AC090515.4-201ENST00000558042 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
AC090515.4-201ENST00000558042 TULP4Q9NRJ4 1543 aa23.71■■□□□ 1.39
AC090515.4-201ENST00000558042 DDX17Q92841 729 aaKnown RBP23.7■■□□□ 1.38
AC090515.4-201ENST00000558042 TIMELESSQ9UNS1 1208 aa23.7■■□□□ 1.38
AC090515.4-201ENST00000558042 MINK1Q8N4C8 1332 aaPredicted RBP23.69■■□□□ 1.38
AC090515.4-201ENST00000558042 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
AC090515.4-201ENST00000558042 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
AC090515.4-201ENST00000558042 RALGAPBQ86X10 1494 aa23.68■■□□□ 1.38
AC090515.4-201ENST00000558042 CENPJQ9HC77 1338 aaPredicted RBP23.67■■□□□ 1.38
AC090515.4-201ENST00000558042 HIRIP3Q9BW71 556 aaPredicted RBP23.67■■□□□ 1.38
AC090515.4-201ENST00000558042 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
AC090515.4-201ENST00000558042 NUTM2FA1L443 756 aa23.66■■□□□ 1.38
AC090515.4-201ENST00000558042 FOXO3O43524 673 aa23.66■■□□□ 1.38
AC090515.4-201ENST00000558042 PHF8Q9UPP1 1060 aa23.66■■□□□ 1.38
AC090515.4-201ENST00000558042 RGPD8O14715 1765 aaPredicted RBP23.65■■□□□ 1.38
AC090515.4-201ENST00000558042 ATP7BP35670 1465 aa23.64■■□□□ 1.38
AC090515.4-201ENST00000558042 LRP6O75581 1613 aa23.64■■□□□ 1.38
AC090515.4-201ENST00000558042 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
AC090515.4-201ENST00000558042 CDK19Q9BWU1 502 aa23.61■■□□□ 1.37
AC090515.4-201ENST00000558042 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
AC090515.4-201ENST00000558042 RGS17Q9UGC6 210 aaPredicted RBP23.6■■□□□ 1.37
AC090515.4-201ENST00000558042 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
AC090515.4-201ENST00000558042 NUDT16Q96DE0 195 aaKnown RBP23.59■■□□□ 1.37
AC090515.4-201ENST00000558042 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
AC090515.4-201ENST00000558042 QRICH2Q9H0J4 1663 aa23.58■■□□□ 1.37
AC090515.4-201ENST00000558042 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
AC090515.4-201ENST00000558042 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 PSME1Q06323 249 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 TOPAZ1Q8N9V7 1692 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
AC090515.4-201ENST00000558042 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
AC090515.4-201ENST00000558042 ILDR2Q71H61 639 aa23.55■■□□□ 1.36
AC090515.4-201ENST00000558042 TNS3Q68CZ2 1445 aa23.54■■□□□ 1.36
AC090515.4-201ENST00000558042 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
AC090515.4-201ENST00000558042 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
AC090515.4-201ENST00000558042 TRPM3Q9HCF6 1732 aaPredicted RBP23.52■■□□□ 1.36
AC090515.4-201ENST00000558042 EVC2Q86UK5 1308 aa23.51■■□□□ 1.35
AC090515.4-201ENST00000558042 ARHGEF10O15013 1369 aa23.5■■□□□ 1.35
AC090515.4-201ENST00000558042 NUTM2BA6NNL0 878 aaPredicted RBP23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 NUTM2EB1AL46 878 aaPredicted RBP23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 NUTM2AQ8IVF1 878 aaPredicted RBP23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 NGDNQ8NEJ9 315 aaKnown RBP23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 ALS2Q96Q42 1657 aa23.47■■□□□ 1.35
AC090515.4-201ENST00000558042 BRD4O60885 1362 aaPredicted RBP23.46■■□□□ 1.35
AC090515.4-201ENST00000558042 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
AC090515.4-201ENST00000558042 PUS7Q96PZ0 661 aaKnown RBP23.46■■□□□ 1.35
AC090515.4-201ENST00000558042 CABP2Q9NPB3 220 aa23.46■■□□□ 1.35
AC090515.4-201ENST00000558042 ACEP12821 1306 aa23.45■■□□□ 1.34
AC090515.4-201ENST00000558042 MEX3CQ5U5Q3 659 aaKnown RBP23.45■■□□□ 1.34
AC090515.4-201ENST00000558042 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
AC090515.4-201ENST00000558042 POTEAQ6S8J7 498 aa23.45■■□□□ 1.34
AC090515.4-201ENST00000558042 PPIP5K1Q6PFW1 1433 aa23.44■■□□□ 1.34
AC090515.4-201ENST00000558042 SLC24A1O60721 1099 aa23.44■■□□□ 1.34
AC090515.4-201ENST00000558042 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
AC090515.4-201ENST00000558042 TESK2Q96S53 571 aa23.43■■□□□ 1.34
AC090515.4-201ENST00000558042 ATAD2Q6PL18 1390 aa23.42■■□□□ 1.34
AC090515.4-201ENST00000558042 AFF2P51816 1311 aa23.4■■□□□ 1.34
AC090515.4-201ENST00000558042 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
AC090515.4-201ENST00000558042 SSH2Q76I76 1423 aa23.39■■□□□ 1.33
AC090515.4-201ENST00000558042 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.33
AC090515.4-201ENST00000558042 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
AC090515.4-201ENST00000558042 ADAMTS2O95450 1211 aa23.38■■□□□ 1.33
AC090515.4-201ENST00000558042 ABCA3Q99758 1704 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms