RNA–Protein interactions for RNA: ENST00000557999.5

AP3S2-203, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-203ENST00000557999 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
AP3S2-203ENST00000557999 HFM1A2PYH4 1435 aa12.49□□□□□ -0.41
AP3S2-203ENST00000557999 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
AP3S2-203ENST00000557999 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
AP3S2-203ENST00000557999 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
AP3S2-203ENST00000557999 MYOM2P54296 1465 aa12.47□□□□□ -0.41
AP3S2-203ENST00000557999 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
AP3S2-203ENST00000557999 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.41
AP3S2-203ENST00000557999 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
AP3S2-203ENST00000557999 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
AP3S2-203ENST00000557999 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
AP3S2-203ENST00000557999 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
AP3S2-203ENST00000557999 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
AP3S2-203ENST00000557999 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
AP3S2-203ENST00000557999 PXDNQ92626 1479 aa12.43□□□□□ -0.42
AP3S2-203ENST00000557999 GJD4Q96KN9 370 aaPredicted RBP12.43□□□□□ -0.42
AP3S2-203ENST00000557999 FOXO3O43524 673 aa12.42□□□□□ -0.42
AP3S2-203ENST00000557999 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
AP3S2-203ENST00000557999 KIF1BO60333 1816 aa12.41□□□□□ -0.42
AP3S2-203ENST00000557999 NAIPQ13075 1403 aa12.41□□□□□ -0.42
AP3S2-203ENST00000557999 BLMP54132 1417 aaPredicted RBP12.4□□□□□ -0.42
AP3S2-203ENST00000557999 PPARGC1BQ86YN6 1023 aaKnown RBP12.4□□□□□ -0.42
AP3S2-203ENST00000557999 UNC5CLQ8IV45 518 aa12.39□□□□□ -0.43
AP3S2-203ENST00000557999 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
AP3S2-203ENST00000557999 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
AP3S2-203ENST00000557999 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
AP3S2-203ENST00000557999 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
AP3S2-203ENST00000557999 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
AP3S2-203ENST00000557999 TECPR2O15040 1411 aa12.37□□□□□ -0.43
AP3S2-203ENST00000557999 SLIT2O94813 1529 aa12.37□□□□□ -0.43
AP3S2-203ENST00000557999 EP400Q96L91 3159 aa12.37□□□□□ -0.43
AP3S2-203ENST00000557999 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
AP3S2-203ENST00000557999 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
AP3S2-203ENST00000557999 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
AP3S2-203ENST00000557999 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
AP3S2-203ENST00000557999 STK26Q9P289 416 aa12.36□□□□□ -0.43
AP3S2-203ENST00000557999 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
AP3S2-203ENST00000557999 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
AP3S2-203ENST00000557999 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
AP3S2-203ENST00000557999 GLI3P10071 1580 aa12.35□□□□□ -0.43
AP3S2-203ENST00000557999 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
AP3S2-203ENST00000557999 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
AP3S2-203ENST00000557999 PPLO60437 1756 aa12.34□□□□□ -0.43
AP3S2-203ENST00000557999 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
AP3S2-203ENST00000557999 MARF1Q9Y4F3 1742 aaKnown RBP12.34□□□□□ -0.43
AP3S2-203ENST00000557999 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 PSME1Q06323 249 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 VPS72Q15906 364 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 DEFB132Q7Z7B7 95 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.44
AP3S2-203ENST00000557999 TNS3Q68CZ2 1445 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
AP3S2-203ENST00000557999 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
AP3S2-203ENST00000557999 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
AP3S2-203ENST00000557999 TMEM132EQ6IEE7 984 aa12.31□□□□□ -0.44
AP3S2-203ENST00000557999 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
AP3S2-203ENST00000557999 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
AP3S2-203ENST00000557999 A0A0G2JS52 829 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 MYT1Q01538 1121 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
AP3S2-203ENST00000557999 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
AP3S2-203ENST00000557999 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
AP3S2-203ENST00000557999 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
AP3S2-203ENST00000557999 BAG6P46379 1132 aa12.29□□□□□ -0.44
AP3S2-203ENST00000557999 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
AP3S2-203ENST00000557999 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
AP3S2-203ENST00000557999 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
AP3S2-203ENST00000557999 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
AP3S2-203ENST00000557999 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
AP3S2-203ENST00000557999 SIRT1Q96EB6 747 aa12.28□□□□□ -0.44
AP3S2-203ENST00000557999 LRP5O75197 1615 aa12.28□□□□□ -0.44
AP3S2-203ENST00000557999 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
AP3S2-203ENST00000557999 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
AP3S2-203ENST00000557999 DHX57Q6P158 1386 aaKnown RBP12.25□□□□□ -0.45
AP3S2-203ENST00000557999 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
AP3S2-203ENST00000557999 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
AP3S2-203ENST00000557999 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
AP3S2-203ENST00000557999 HRCP23327 699 aa12.24□□□□□ -0.45
AP3S2-203ENST00000557999 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
AP3S2-203ENST00000557999 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
AP3S2-203ENST00000557999 PRAM1Q96QH2 718 aa12.24□□□□□ -0.45
AP3S2-203ENST00000557999 ANKARQ7Z5J8 1434 aa12.23□□□□□ -0.45
AP3S2-203ENST00000557999 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
AP3S2-203ENST00000557999 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
AP3S2-203ENST00000557999 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
AP3S2-203ENST00000557999 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
AP3S2-203ENST00000557999 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
AP3S2-203ENST00000557999 IFT172Q9UG01 1749 aa12.23□□□□□ -0.45
AP3S2-203ENST00000557999 GPRASP1Q5JY77 1395 aa12.22□□□□□ -0.45
AP3S2-203ENST00000557999 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
AP3S2-203ENST00000557999 POGKQ9P215 609 aa12.22□□□□□ -0.45
AP3S2-203ENST00000557999 CFAP70Q5T0N1 1121 aa12.21□□□□□ -0.45
AP3S2-203ENST00000557999 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
AP3S2-203ENST00000557999 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
AP3S2-203ENST00000557999 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
AP3S2-203ENST00000557999 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms