RNA–Protein interactions for RNA: ENST00000557920.1

KNSTRN-204, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-204ENST00000557920 C20orf194Q5TEA3 1177 aa16.53■□□□□ 0.24
KNSTRN-204ENST00000557920 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
KNSTRN-204ENST00000557920 NPATQ14207 1427 aa16.53■□□□□ 0.24
KNSTRN-204ENST00000557920 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
KNSTRN-204ENST00000557920 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
KNSTRN-204ENST00000557920 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
KNSTRN-204ENST00000557920 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
KNSTRN-204ENST00000557920 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
KNSTRN-204ENST00000557920 NSD3Q9BZ95 1437 aa16.51■□□□□ 0.23
KNSTRN-204ENST00000557920 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
KNSTRN-204ENST00000557920 ABCC3O15438 1527 aa16.5■□□□□ 0.23
KNSTRN-204ENST00000557920 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
KNSTRN-204ENST00000557920 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
KNSTRN-204ENST00000557920 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
KNSTRN-204ENST00000557920 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
KNSTRN-204ENST00000557920 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
KNSTRN-204ENST00000557920 FRMPD1Q5SYB0 1578 aa16.48■□□□□ 0.23
KNSTRN-204ENST00000557920 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
KNSTRN-204ENST00000557920 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
KNSTRN-204ENST00000557920 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
KNSTRN-204ENST00000557920 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
KNSTRN-204ENST00000557920 MED14O60244 1454 aa16.47■□□□□ 0.23
KNSTRN-204ENST00000557920 NEFMP07197 916 aa16.46■□□□□ 0.23
KNSTRN-204ENST00000557920 CLUAP1Q96AJ1 413 aa16.46■□□□□ 0.23
KNSTRN-204ENST00000557920 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.23
KNSTRN-204ENST00000557920 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
KNSTRN-204ENST00000557920 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
KNSTRN-204ENST00000557920 GLI2P10070 1586 aa16.43■□□□□ 0.22
KNSTRN-204ENST00000557920 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
KNSTRN-204ENST00000557920 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
KNSTRN-204ENST00000557920 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
KNSTRN-204ENST00000557920 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
KNSTRN-204ENST00000557920 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
KNSTRN-204ENST00000557920 IL16Q14005 1332 aa16.42■□□□□ 0.22
KNSTRN-204ENST00000557920 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
KNSTRN-204ENST00000557920 BCAR3O75815 825 aa16.41■□□□□ 0.22
KNSTRN-204ENST00000557920 TCP11L2Q8N4U5 519 aa16.41■□□□□ 0.22
KNSTRN-204ENST00000557920 TRAK1Q9UPV9 953 aa16.41■□□□□ 0.22
KNSTRN-204ENST00000557920 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
KNSTRN-204ENST00000557920 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
KNSTRN-204ENST00000557920 BECN1Q14457 450 aa16.4■□□□□ 0.22
KNSTRN-204ENST00000557920 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
KNSTRN-204ENST00000557920 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
KNSTRN-204ENST00000557920 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
KNSTRN-204ENST00000557920 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
KNSTRN-204ENST00000557920 MTHFSP49914 203 aa16.38■□□□□ 0.21
KNSTRN-204ENST00000557920 TULP4Q9NRJ4 1543 aa16.38■□□□□ 0.21
KNSTRN-204ENST00000557920 UPF2Q9HAU5 1272 aaKnown RBP16.37■□□□□ 0.21
KNSTRN-204ENST00000557920 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
KNSTRN-204ENST00000557920 GGT6Q6P531 493 aa16.36■□□□□ 0.21
KNSTRN-204ENST00000557920 OSCARQ8IYS5 282 aa16.36■□□□□ 0.21
KNSTRN-204ENST00000557920 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
KNSTRN-204ENST00000557920 DIP2CQ9Y2E4 1556 aa16.35■□□□□ 0.21
KNSTRN-204ENST00000557920 CLTCQ00610 1675 aaKnown RBP16.35■□□□□ 0.21
KNSTRN-204ENST00000557920 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
KNSTRN-204ENST00000557920 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
KNSTRN-204ENST00000557920 IGHDP01880 384 aa16.34■□□□□ 0.21
KNSTRN-204ENST00000557920 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
KNSTRN-204ENST00000557920 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
KNSTRN-204ENST00000557920 RGS3P49796 1198 aa16.33■□□□□ 0.2
KNSTRN-204ENST00000557920 GSE1Q14687 1217 aa16.33■□□□□ 0.2
KNSTRN-204ENST00000557920 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
KNSTRN-204ENST00000557920 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
KNSTRN-204ENST00000557920 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.2
KNSTRN-204ENST00000557920 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
KNSTRN-204ENST00000557920 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
KNSTRN-204ENST00000557920 U2AF1L5P0DN76 240 aaPredicted RBP16.3■□□□□ 0.2
KNSTRN-204ENST00000557920 U2AF1Q01081 240 aaKnown RBP eCLIP16.3■□□□□ 0.2
KNSTRN-204ENST00000557920 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
KNSTRN-204ENST00000557920 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
KNSTRN-204ENST00000557920 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 DDX19BQ9UMR2 479 aa16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
KNSTRN-204ENST00000557920 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 PTPRMP28827 1452 aa16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
KNSTRN-204ENST00000557920 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 USP19O94966 1318 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 CALD1Q05682 793 aaKnown RBP16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
KNSTRN-204ENST00000557920 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
KNSTRN-204ENST00000557920 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
KNSTRN-204ENST00000557920 IDI1Q13907 227 aa16.26■□□□□ 0.19
KNSTRN-204ENST00000557920 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
KNSTRN-204ENST00000557920 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
KNSTRN-204ENST00000557920 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
KNSTRN-204ENST00000557920 YTHDC2Q9H6S0 1430 aaKnown RBP16.25■□□□□ 0.19
KNSTRN-204ENST00000557920 ATP7BP35670 1465 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms