RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
PKNOX1-207ENST00000557820 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
PKNOX1-207ENST00000557820 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
PKNOX1-207ENST00000557820 C1QBPQ07021 282 aaKnown RBP9.23□□□□□ -0.93
PKNOX1-207ENST00000557820 NEUROD1Q13562 356 aa9.23□□□□□ -0.93
PKNOX1-207ENST00000557820 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
PKNOX1-207ENST00000557820 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 ADGRB1O14514 1584 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 LAMC1P11047 1609 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 TECPR2O15040 1411 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 DCCP43146 1447 aa9.22□□□□□ -0.93
PKNOX1-207ENST00000557820 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.94
PKNOX1-207ENST00000557820 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
PKNOX1-207ENST00000557820 PRAM1Q96QH2 718 aa9.2□□□□□ -0.94
PKNOX1-207ENST00000557820 ORAI2Q96SN7 254 aa9.2□□□□□ -0.94
PKNOX1-207ENST00000557820 TRAK1Q9UPV9 953 aa9.2□□□□□ -0.94
PKNOX1-207ENST00000557820 ABCC11Q96J66 1382 aa9.2□□□□□ -0.94
PKNOX1-207ENST00000557820 ILDR2Q71H61 639 aa9.19□□□□□ -0.94
PKNOX1-207ENST00000557820 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
PKNOX1-207ENST00000557820 CDC42BPGQ6DT37 1551 aa9.19□□□□□ -0.94
PKNOX1-207ENST00000557820 AHDC1Q5TGY3 1603 aaPredicted RBP9.19□□□□□ -0.94
PKNOX1-207ENST00000557820 XPCQ01831 940 aaPredicted RBP9.18□□□□□ -0.94
PKNOX1-207ENST00000557820 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
PKNOX1-207ENST00000557820 HIRIP3Q9BW71 556 aaPredicted RBP9.18□□□□□ -0.94
PKNOX1-207ENST00000557820 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
PKNOX1-207ENST00000557820 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
PKNOX1-207ENST00000557820 LRP6O75581 1613 aa9.16□□□□□ -0.94
PKNOX1-207ENST00000557820 NHSL1Q5SYE7 1610 aa9.16□□□□□ -0.94
PKNOX1-207ENST00000557820 POGKQ9P215 609 aa9.16□□□□□ -0.94
PKNOX1-207ENST00000557820 FMN2Q9NZ56 1722 aa9.16□□□□□ -0.94
PKNOX1-207ENST00000557820 DLC1Q96QB1 1528 aa9.15□□□□□ -0.94
PKNOX1-207ENST00000557820 ARHGEF28Q8N1W1 1705 aaKnown RBP9.15□□□□□ -0.94
PKNOX1-207ENST00000557820 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
PKNOX1-207ENST00000557820 JCADQ9P266 1359 aa9.14□□□□□ -0.95
PKNOX1-207ENST00000557820 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-207ENST00000557820 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-207ENST00000557820 NBPF8Q3BBV2 869 aa9.14□□□□□ -0.95
PKNOX1-207ENST00000557820 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-207ENST00000557820 USP32Q8NFA0 1604 aa9.13□□□□□ -0.95
PKNOX1-207ENST00000557820 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
PKNOX1-207ENST00000557820 ADGRB2O60241 1585 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 FOXO3O43524 673 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 RGS17Q9UGC6 210 aaPredicted RBP9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 TRPM1Q7Z4N2 1603 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
PKNOX1-207ENST00000557820 KIAA1210Q9ULL0 1709 aa9.11□□□□□ -0.95
PKNOX1-207ENST00000557820 SHPRHQ149N8 1683 aa9.11□□□□□ -0.95
PKNOX1-207ENST00000557820 PXDNQ92626 1479 aa9.11□□□□□ -0.95
PKNOX1-207ENST00000557820 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
PKNOX1-207ENST00000557820 SIRT1Q96EB6 747 aa9.11□□□□□ -0.95
PKNOX1-207ENST00000557820 MEX3CQ5U5Q3 659 aaKnown RBP9.1□□□□□ -0.95
PKNOX1-207ENST00000557820 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
PKNOX1-207ENST00000557820 ROCK2O75116 1388 aaKnown RBP9.1□□□□□ -0.95
PKNOX1-207ENST00000557820 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
PKNOX1-207ENST00000557820 PHF8Q9UPP1 1060 aa9.09□□□□□ -0.95
PKNOX1-207ENST00000557820 TULP4Q9NRJ4 1543 aa9.09□□□□□ -0.95
PKNOX1-207ENST00000557820 NPHP3Q7Z494 1330 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 KIF1AQ12756 1690 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 QRICH2Q9H0J4 1663 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 ADAMTS2O95450 1211 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 LRRC59Q96AG4 307 aaKnown RBP9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 ATP7BP35670 1465 aa9.08□□□□□ -0.96
PKNOX1-207ENST00000557820 SPATA31A6Q5VVP1 1343 aa9.07□□□□□ -0.96
PKNOX1-207ENST00000557820 CENPJQ9HC77 1338 aaPredicted RBP9.07□□□□□ -0.96
PKNOX1-207ENST00000557820 ANKARQ7Z5J8 1434 aa9.07□□□□□ -0.96
PKNOX1-207ENST00000557820 KRT28Q7Z3Y7 464 aa9.07□□□□□ -0.96
PKNOX1-207ENST00000557820 CDK19Q9BWU1 502 aa9.07□□□□□ -0.96
PKNOX1-207ENST00000557820 CABLES1Q8TDN4 633 aa9.06□□□□□ -0.96
PKNOX1-207ENST00000557820 C8orf37Q96NL8 207 aa9.06□□□□□ -0.96
PKNOX1-207ENST00000557820 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
PKNOX1-207ENST00000557820 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
PKNOX1-207ENST00000557820 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 LMOD2Q6P5Q4 547 aa9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 NUDT16Q96DE0 195 aaKnown RBP9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 TNS3Q68CZ2 1445 aa9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 AFF2P51816 1311 aa9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
PKNOX1-207ENST00000557820 TOPAZ1Q8N9V7 1692 aa9.04□□□□□ -0.96
PKNOX1-207ENST00000557820 GPRASP1Q5JY77 1395 aa9.04□□□□□ -0.96
PKNOX1-207ENST00000557820 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
PKNOX1-207ENST00000557820 COL22A1Q8NFW1 1626 aaPredicted RBP9.04□□□□□ -0.96
PKNOX1-207ENST00000557820 TRPM3Q9HCF6 1732 aaPredicted RBP9.03□□□□□ -0.96
PKNOX1-207ENST00000557820 EIF3AQ14152 1382 aaKnown RBP9.03□□□□□ -0.96
PKNOX1-207ENST00000557820 PSME1Q06323 249 aa9.03□□□□□ -0.96
PKNOX1-207ENST00000557820 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
PKNOX1-207ENST00000557820 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
PKNOX1-207ENST00000557820 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
PKNOX1-207ENST00000557820 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
PKNOX1-207ENST00000557820 PPIP5K1Q6PFW1 1433 aa9.02□□□□□ -0.97
PKNOX1-207ENST00000557820 ITSN1Q15811 1721 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms