RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 C8orf37Q96NL8 207 aa31.83■■■□□ 2.69
CRNDE-203ENST00000557792 CDK12Q9NYV4 1490 aaPredicted RBP31.82■■■□□ 2.68
CRNDE-203ENST00000557792 TMEM132EQ6IEE7 984 aa31.81■■■□□ 2.68
CRNDE-203ENST00000557792 PIK3C2GO75747 1445 aa31.81■■■□□ 2.68
CRNDE-203ENST00000557792 CDC42BPGQ6DT37 1551 aa31.79■■■□□ 2.68
CRNDE-203ENST00000557792 UPF1Q92900 1129 aaKnown RBP eCLIP31.79■■■□□ 2.68
CRNDE-203ENST00000557792 C14orf93Q9H972 538 aaKnown RBP31.79■■■□□ 2.68
CRNDE-203ENST00000557792 STK26Q9P289 416 aa31.78■■■□□ 2.68
CRNDE-203ENST00000557792 ADAMTS2O95450 1211 aa31.76■■■□□ 2.67
CRNDE-203ENST00000557792 CFAP70Q5T0N1 1121 aa31.76■■■□□ 2.67
CRNDE-203ENST00000557792 TECPR2O15040 1411 aa31.75■■■□□ 2.67
CRNDE-203ENST00000557792 QTRT2Q9H974 415 aaKnown RBP31.75■■■□□ 2.67
CRNDE-203ENST00000557792 NRXN1Q9ULB1 1477 aa31.74■■■□□ 2.67
CRNDE-203ENST00000557792 LRPPRCP42704 1394 aaKnown RBP31.74■■■□□ 2.67
CRNDE-203ENST00000557792 DCAF11Q8TEB1 546 aa31.74■■■□□ 2.67
CRNDE-203ENST00000557792 KDM2AQ9Y2K7 1162 aa31.74■■■□□ 2.67
CRNDE-203ENST00000557792 MYOM2P54296 1465 aa31.73■■■□□ 2.67
CRNDE-203ENST00000557792 NGLY1Q96IV0 654 aa31.73■■■□□ 2.67
CRNDE-203ENST00000557792 ESCO1Q5FWF5 840 aa31.72■■■□□ 2.67
CRNDE-203ENST00000557792 WAPLQ7Z5K2 1190 aa31.72■■■□□ 2.67
CRNDE-203ENST00000557792 KNDC1Q76NI1 1749 aa31.72■■■□□ 2.67
CRNDE-203ENST00000557792 ABCC11Q96J66 1382 aa31.71■■■□□ 2.67
CRNDE-203ENST00000557792 RBM6P78332 1123 aaKnown RBP31.71■■■□□ 2.67
CRNDE-203ENST00000557792 COL22A1Q8NFW1 1626 aaPredicted RBP31.71■■■□□ 2.67
CRNDE-203ENST00000557792 NPHP3Q7Z494 1330 aa31.69■■■□□ 2.66
CRNDE-203ENST00000557792 RGS12O14924 1447 aa31.68■■■□□ 2.66
CRNDE-203ENST00000557792 DHX57Q6P158 1386 aaKnown RBP31.68■■■□□ 2.66
CRNDE-203ENST00000557792 PLEKHH1Q9ULM0 1364 aa31.68■■■□□ 2.66
CRNDE-203ENST00000557792 STAC3Q96MF2 364 aa31.67■■■□□ 2.66
CRNDE-203ENST00000557792 PXDNQ92626 1479 aa31.66■■■□□ 2.66
CRNDE-203ENST00000557792 YTHDC2Q9H6S0 1430 aaKnown RBP31.66■■■□□ 2.66
CRNDE-203ENST00000557792 NUTM2FA1L443 756 aa31.64■■■□□ 2.66
CRNDE-203ENST00000557792 FOXO3O43524 673 aa31.64■■■□□ 2.66
CRNDE-203ENST00000557792 TRIM26Q12899 539 aaPredicted RBP31.63■■■□□ 2.65
CRNDE-203ENST00000557792 XPCQ01831 940 aaPredicted RBP31.62■■■□□ 2.65
CRNDE-203ENST00000557792 FMN2Q9NZ56 1722 aa31.62■■■□□ 2.65
CRNDE-203ENST00000557792 USP21Q9UK80 565 aa31.62■■■□□ 2.65
CRNDE-203ENST00000557792 SIRT1Q96EB6 747 aa31.61■■■□□ 2.65
CRNDE-203ENST00000557792 FNBP4Q8N3X1 1017 aaPredicted RBP31.6■■■□□ 2.65
CRNDE-203ENST00000557792 TRPC5Q9UL62 973 aaPredicted RBP31.57■■■□□ 2.64
CRNDE-203ENST00000557792 MARF1Q9Y4F3 1742 aaKnown RBP31.56■■■□□ 2.64
CRNDE-203ENST00000557792 KIF1AQ12756 1690 aa31.54■■■□□ 2.64
CRNDE-203ENST00000557792 ATRNO75882 1429 aa31.53■■■□□ 2.64
CRNDE-203ENST00000557792 PRAM1Q96QH2 718 aa31.52■■■□□ 2.64
CRNDE-203ENST00000557792 SIN3AQ96ST3 1273 aa31.52■■■□□ 2.64
CRNDE-203ENST00000557792 RGPD8O14715 1765 aaPredicted RBP31.51■■■□□ 2.64
CRNDE-203ENST00000557792 TRAK1Q9UPV9 953 aa31.5■■■□□ 2.63
CRNDE-203ENST00000557792 ADGRB1O14514 1584 aa31.5■■■□□ 2.63
CRNDE-203ENST00000557792 BCL9LQ86UU0 1499 aa31.48■■■□□ 2.63
CRNDE-203ENST00000557792 SAFB2Q14151 953 aaKnown RBP eCLIP31.48■■■□□ 2.63
CRNDE-203ENST00000557792 SPATA31A3Q5VYP0 1347 aa31.48■■■□□ 2.63
CRNDE-203ENST00000557792 POGKQ9P215 609 aa31.47■■■□□ 2.63
CRNDE-203ENST00000557792 NEUROD1Q13562 356 aa31.45■■■□□ 2.63
CRNDE-203ENST00000557792 KRT28Q7Z3Y7 464 aa31.45■■■□□ 2.63
CRNDE-203ENST00000557792 ATAD2Q6PL18 1390 aa31.44■■■□□ 2.62
CRNDE-203ENST00000557792 L3MBTL2Q969R5 705 aa31.44■■■□□ 2.62
CRNDE-203ENST00000557792 PHF8Q9UPP1 1060 aa31.43■■■□□ 2.62
CRNDE-203ENST00000557792 DLC1Q96QB1 1528 aa31.42■■■□□ 2.62
CRNDE-203ENST00000557792 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.4■■■□□ 2.62
CRNDE-203ENST00000557792 EP400Q96L91 3159 aa31.39■■■□□ 2.62
CRNDE-203ENST00000557792 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
CRNDE-203ENST00000557792 GJD4Q96KN9 370 aaPredicted RBP31.37■■■□□ 2.61
CRNDE-203ENST00000557792 TNS3Q68CZ2 1445 aa31.37■■■□□ 2.61
CRNDE-203ENST00000557792 USP32Q8NFA0 1604 aa31.37■■■□□ 2.61
CRNDE-203ENST00000557792 SLIT2O94813 1529 aa31.36■■■□□ 2.61
CRNDE-203ENST00000557792 PSME1Q06323 249 aa31.36■■■□□ 2.61
CRNDE-203ENST00000557792 UNC5CLQ8IV45 518 aa31.34■■■□□ 2.61
CRNDE-203ENST00000557792 HIRIP3Q9BW71 556 aaPredicted RBP31.34■■■□□ 2.61
CRNDE-203ENST00000557792 ADGRB2O60241 1585 aa31.34■■■□□ 2.61
CRNDE-203ENST00000557792 MINK1Q8N4C8 1332 aaPredicted RBP31.33■■■□□ 2.61
CRNDE-203ENST00000557792 SBNO1A3KN83 1393 aa31.32■■■□□ 2.6
CRNDE-203ENST00000557792 ANKARQ7Z5J8 1434 aa31.32■■■□□ 2.6
CRNDE-203ENST00000557792 CABLES1Q8TDN4 633 aa31.31■■■□□ 2.6
CRNDE-203ENST00000557792 GLI3P10071 1580 aa31.3■■■□□ 2.6
CRNDE-203ENST00000557792 RALGAPBQ86X10 1494 aa31.29■■■□□ 2.6
CRNDE-203ENST00000557792 HAP1P54257 671 aaPredicted RBP31.29■■■□□ 2.6
CRNDE-203ENST00000557792 PMFBP1Q8TBY8 1022 aa31.29■■■□□ 2.6
CRNDE-203ENST00000557792 ABCA3Q99758 1704 aa31.29■■■□□ 2.6
CRNDE-203ENST00000557792 PLEKHG5O94827 1062 aa31.28■■■□□ 2.6
CRNDE-203ENST00000557792 LMOD2Q6P5Q4 547 aa31.27■■■□□ 2.6
CRNDE-203ENST00000557792 ARHGEF10O15013 1369 aa31.27■■■□□ 2.6
CRNDE-203ENST00000557792 WASLO00401 505 aaPredicted RBP31.25■■■□□ 2.59
CRNDE-203ENST00000557792 PLCH1Q4KWH8 1693 aa31.25■■■□□ 2.59
CRNDE-203ENST00000557792 KIAA1210Q9ULL0 1709 aa31.24■■■□□ 2.59
CRNDE-203ENST00000557792 TRPM3Q9HCF6 1732 aaPredicted RBP31.23■■■□□ 2.59
CRNDE-203ENST00000557792 NWD2Q9ULI1 1742 aa31.23■■■□□ 2.59
CRNDE-203ENST00000557792 PRR36Q9H6K5 1346 aa31.21■■■□□ 2.59
CRNDE-203ENST00000557792 EIF3AQ14152 1382 aaKnown RBP31.2■■■□□ 2.59
CRNDE-203ENST00000557792 TULP4Q9NRJ4 1543 aa31.2■■■□□ 2.59
CRNDE-203ENST00000557792 BRWD3Q6RI45 1802 aa31.2■■■□□ 2.59
CRNDE-203ENST00000557792 CCDC125Q86Z20 511 aa31.2■■■□□ 2.59
CRNDE-203ENST00000557792 SRCAPQ6ZRS2 3230 aa31.19■■■□□ 2.58
CRNDE-203ENST00000557792 VPS72Q15906 364 aa31.19■■■□□ 2.58
CRNDE-203ENST00000557792 ALS2Q96Q42 1657 aa31.17■■■□□ 2.58
CRNDE-203ENST00000557792 NBPF8Q3BBV2 869 aa31.17■■■□□ 2.58
CRNDE-203ENST00000557792 ARHGEF28Q8N1W1 1705 aaKnown RBP31.17■■■□□ 2.58
CRNDE-203ENST00000557792 GPRASP1Q5JY77 1395 aa31.16■■■□□ 2.58
CRNDE-203ENST00000557792 FAM83GA6ND36 823 aa31.15■■■□□ 2.58
CRNDE-203ENST00000557792 CDK19Q9BWU1 502 aa31.14■■■□□ 2.58
CRNDE-203ENST00000557792 SEPT12Q8IYM1 358 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms