RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ASXL1Q8IXJ9 1541 aa17.55■□□□□ 0.4
RCCD1-209ENST00000557750 C14orf93Q9H972 538 aaKnown RBP17.55■□□□□ 0.4
RCCD1-209ENST00000557750 MST1RQ04912 1400 aa17.54■□□□□ 0.4
RCCD1-209ENST00000557750 XRN1Q8IZH2 1706 aaKnown RBP17.54■□□□□ 0.4
RCCD1-209ENST00000557750 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
RCCD1-209ENST00000557750 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.4
RCCD1-209ENST00000557750 AFF2P51816 1311 aa17.52■□□□□ 0.4
RCCD1-209ENST00000557750 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.39
RCCD1-209ENST00000557750 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
RCCD1-209ENST00000557750 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
RCCD1-209ENST00000557750 STK26Q9P289 416 aa17.49■□□□□ 0.39
RCCD1-209ENST00000557750 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
RCCD1-209ENST00000557750 NHSL1Q5SYE7 1610 aa17.49■□□□□ 0.39
RCCD1-209ENST00000557750 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
RCCD1-209ENST00000557750 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
RCCD1-209ENST00000557750 LAMC1P11047 1609 aa17.48■□□□□ 0.39
RCCD1-209ENST00000557750 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
RCCD1-209ENST00000557750 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.39
RCCD1-209ENST00000557750 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.38
RCCD1-209ENST00000557750 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.38
RCCD1-209ENST00000557750 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
RCCD1-209ENST00000557750 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
RCCD1-209ENST00000557750 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
RCCD1-209ENST00000557750 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
RCCD1-209ENST00000557750 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
RCCD1-209ENST00000557750 RGS12O14924 1447 aa17.43■□□□□ 0.38
RCCD1-209ENST00000557750 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
RCCD1-209ENST00000557750 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
RCCD1-209ENST00000557750 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
RCCD1-209ENST00000557750 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
RCCD1-209ENST00000557750 C1orf167Q5SNV9 1468 aa17.42■□□□□ 0.38
RCCD1-209ENST00000557750 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
RCCD1-209ENST00000557750 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
RCCD1-209ENST00000557750 TECPR2O15040 1411 aa17.4■□□□□ 0.38
RCCD1-209ENST00000557750 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
RCCD1-209ENST00000557750 KIAA1210Q9ULL0 1709 aa17.4■□□□□ 0.38
RCCD1-209ENST00000557750 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
RCCD1-209ENST00000557750 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
RCCD1-209ENST00000557750 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
RCCD1-209ENST00000557750 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
RCCD1-209ENST00000557750 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
RCCD1-209ENST00000557750 POGKQ9P215 609 aa17.38■□□□□ 0.37
RCCD1-209ENST00000557750 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
RCCD1-209ENST00000557750 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
RCCD1-209ENST00000557750 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
RCCD1-209ENST00000557750 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
RCCD1-209ENST00000557750 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
RCCD1-209ENST00000557750 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
RCCD1-209ENST00000557750 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
RCCD1-209ENST00000557750 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
RCCD1-209ENST00000557750 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
RCCD1-209ENST00000557750 USP21Q9UK80 565 aa17.34■□□□□ 0.37
RCCD1-209ENST00000557750 FNBP4Q8N3X1 1017 aaPredicted RBP17.32■□□□□ 0.36
RCCD1-209ENST00000557750 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
RCCD1-209ENST00000557750 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
RCCD1-209ENST00000557750 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
RCCD1-209ENST00000557750 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
RCCD1-209ENST00000557750 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
RCCD1-209ENST00000557750 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
RCCD1-209ENST00000557750 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
RCCD1-209ENST00000557750 ATRNO75882 1429 aa17.28■□□□□ 0.36
RCCD1-209ENST00000557750 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
RCCD1-209ENST00000557750 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.35
RCCD1-209ENST00000557750 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
RCCD1-209ENST00000557750 USP47Q96K76 1375 aa17.25■□□□□ 0.35
RCCD1-209ENST00000557750 FOXO3O43524 673 aa17.25■□□□□ 0.35
RCCD1-209ENST00000557750 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
RCCD1-209ENST00000557750 EP400Q96L91 3159 aa17.25■□□□□ 0.35
RCCD1-209ENST00000557750 PXDNQ92626 1479 aa17.25■□□□□ 0.35
RCCD1-209ENST00000557750 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
RCCD1-209ENST00000557750 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
RCCD1-209ENST00000557750 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
RCCD1-209ENST00000557750 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
RCCD1-209ENST00000557750 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
RCCD1-209ENST00000557750 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
RCCD1-209ENST00000557750 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
RCCD1-209ENST00000557750 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
RCCD1-209ENST00000557750 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
RCCD1-209ENST00000557750 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
RCCD1-209ENST00000557750 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
RCCD1-209ENST00000557750 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
RCCD1-209ENST00000557750 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
RCCD1-209ENST00000557750 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
RCCD1-209ENST00000557750 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
RCCD1-209ENST00000557750 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
RCCD1-209ENST00000557750 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
RCCD1-209ENST00000557750 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
RCCD1-209ENST00000557750 TESK2Q96S53 571 aa17.16■□□□□ 0.34
RCCD1-209ENST00000557750 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
RCCD1-209ENST00000557750 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
RCCD1-209ENST00000557750 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
RCCD1-209ENST00000557750 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
RCCD1-209ENST00000557750 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
RCCD1-209ENST00000557750 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
RCCD1-209ENST00000557750 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
RCCD1-209ENST00000557750 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
RCCD1-209ENST00000557750 SLIT2O94813 1529 aa17.13■□□□□ 0.33
RCCD1-209ENST00000557750 FMN2Q9NZ56 1722 aa17.13■□□□□ 0.33
RCCD1-209ENST00000557750 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
RCCD1-209ENST00000557750 TMF1P82094 1093 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms