RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
PRKCH-227ENST00000557599 PNPLA6Q8IY17 1366 aa15.1■□□□□ 0.01
PRKCH-227ENST00000557599 PIK3C2GO75747 1445 aa15.09■□□□□ 0.01
PRKCH-227ENST00000557599 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
PRKCH-227ENST00000557599 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
PRKCH-227ENST00000557599 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
PRKCH-227ENST00000557599 PXDNQ92626 1479 aa15.06■□□□□ 0
PRKCH-227ENST00000557599 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
PRKCH-227ENST00000557599 ZNF772Q68DY9 489 aaPredicted RBP15.05■□□□□ -0
PRKCH-227ENST00000557599 MYOM2P54296 1465 aa15.05■□□□□ -0
PRKCH-227ENST00000557599 ADGRF5Q8IZF2 1346 aa15.04■□□□□ -0
PRKCH-227ENST00000557599 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
PRKCH-227ENST00000557599 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
PRKCH-227ENST00000557599 ABCC11Q96J66 1382 aa15.02■□□□□ -0
PRKCH-227ENST00000557599 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
PRKCH-227ENST00000557599 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
PRKCH-227ENST00000557599 EP400Q96L91 3159 aa15□□□□□ -0.01
PRKCH-227ENST00000557599 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
PRKCH-227ENST00000557599 RGS12O14924 1447 aa15□□□□□ -0.01
PRKCH-227ENST00000557599 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
PRKCH-227ENST00000557599 AFF2P51816 1311 aa14.99□□□□□ -0.01
PRKCH-227ENST00000557599 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
PRKCH-227ENST00000557599 ORAI2Q96SN7 254 aa14.99□□□□□ -0.01
PRKCH-227ENST00000557599 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
PRKCH-227ENST00000557599 YTHDC2Q9H6S0 1430 aaKnown RBP14.99□□□□□ -0.01
PRKCH-227ENST00000557599 ADGRB1O14514 1584 aa14.98□□□□□ -0.01
PRKCH-227ENST00000557599 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
PRKCH-227ENST00000557599 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
PRKCH-227ENST00000557599 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
PRKCH-227ENST00000557599 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
PRKCH-227ENST00000557599 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
PRKCH-227ENST00000557599 ABCA3Q99758 1704 aa14.96□□□□□ -0.01
PRKCH-227ENST00000557599 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.02
PRKCH-227ENST00000557599 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
PRKCH-227ENST00000557599 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
PRKCH-227ENST00000557599 SIRT1Q96EB6 747 aa14.95□□□□□ -0.02
PRKCH-227ENST00000557599 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
PRKCH-227ENST00000557599 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
PRKCH-227ENST00000557599 RXRBP28702 533 aa14.94□□□□□ -0.02
PRKCH-227ENST00000557599 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
PRKCH-227ENST00000557599 NPHP3Q7Z494 1330 aa14.93□□□□□ -0.02
PRKCH-227ENST00000557599 ATRNO75882 1429 aa14.93□□□□□ -0.02
PRKCH-227ENST00000557599 FNBP4Q8N3X1 1017 aaPredicted RBP14.93□□□□□ -0.02
PRKCH-227ENST00000557599 C14orf93Q9H972 538 aaKnown RBP14.93□□□□□ -0.02
PRKCH-227ENST00000557599 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
PRKCH-227ENST00000557599 BCL9LQ86UU0 1499 aa14.92□□□□□ -0.02
PRKCH-227ENST00000557599 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
PRKCH-227ENST00000557599 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
PRKCH-227ENST00000557599 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
PRKCH-227ENST00000557599 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
PRKCH-227ENST00000557599 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
PRKCH-227ENST00000557599 CRYBG1Q9Y4K1 1723 aa14.89□□□□□ -0.03
PRKCH-227ENST00000557599 SLIT2O94813 1529 aa14.89□□□□□ -0.03
PRKCH-227ENST00000557599 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
PRKCH-227ENST00000557599 GLI3P10071 1580 aa14.88□□□□□ -0.03
PRKCH-227ENST00000557599 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
PRKCH-227ENST00000557599 PLCH1Q4KWH8 1693 aa14.87□□□□□ -0.03
PRKCH-227ENST00000557599 ARHGEF28Q8N1W1 1705 aaKnown RBP14.87□□□□□ -0.03
PRKCH-227ENST00000557599 ANKARQ7Z5J8 1434 aa14.87□□□□□ -0.03
PRKCH-227ENST00000557599 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
PRKCH-227ENST00000557599 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
PRKCH-227ENST00000557599 SRCAPQ6ZRS2 3230 aa14.87□□□□□ -0.03
PRKCH-227ENST00000557599 SPATA31A3Q5VYP0 1347 aa14.86□□□□□ -0.03
PRKCH-227ENST00000557599 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 FOXO3O43524 673 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 ADAMTS2O95450 1211 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 CFAP70Q5T0N1 1121 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 STK26Q9P289 416 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 NRAPQ86VF7 1730 aa14.85□□□□□ -0.03
PRKCH-227ENST00000557599 RALGAPBQ86X10 1494 aa14.84□□□□□ -0.03
PRKCH-227ENST00000557599 NGLY1Q96IV0 654 aa14.84□□□□□ -0.03
PRKCH-227ENST00000557599 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.03
PRKCH-227ENST00000557599 TULP4Q9NRJ4 1543 aa14.83□□□□□ -0.04
PRKCH-227ENST00000557599 USP21Q9UK80 565 aa14.83□□□□□ -0.04
PRKCH-227ENST00000557599 TRPC5Q9UL62 973 aaPredicted RBP14.83□□□□□ -0.04
PRKCH-227ENST00000557599 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
PRKCH-227ENST00000557599 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
PRKCH-227ENST00000557599 TOPAZ1Q8N9V7 1692 aa14.82□□□□□ -0.04
PRKCH-227ENST00000557599 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
PRKCH-227ENST00000557599 EIF4G2P78344 907 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRKCH-227ENST00000557599 NBPF8Q3BBV2 869 aa14.82□□□□□ -0.04
PRKCH-227ENST00000557599 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
PRKCH-227ENST00000557599 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
PRKCH-227ENST00000557599 BRWD3Q6RI45 1802 aa14.8□□□□□ -0.04
PRKCH-227ENST00000557599 XPCQ01831 940 aaPredicted RBP14.8□□□□□ -0.04
PRKCH-227ENST00000557599 ATAD2Q6PL18 1390 aa14.8□□□□□ -0.04
PRKCH-227ENST00000557599 TRPM1Q7Z4N2 1603 aa14.79□□□□□ -0.04
PRKCH-227ENST00000557599 PRAM1Q96QH2 718 aa14.79□□□□□ -0.04
PRKCH-227ENST00000557599 ATP7BP35670 1465 aa14.78□□□□□ -0.04
PRKCH-227ENST00000557599 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
PRKCH-227ENST00000557599 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
PRKCH-227ENST00000557599 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
PRKCH-227ENST00000557599 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
PRKCH-227ENST00000557599 KRT28Q7Z3Y7 464 aa14.76□□□□□ -0.05
PRKCH-227ENST00000557599 COL14A1Q05707 1796 aaKnown RBP14.75□□□□□ -0.05
PRKCH-227ENST00000557599 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
PRKCH-227ENST00000557599 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
PRKCH-227ENST00000557599 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
PRKCH-227ENST00000557599 GPRASP1Q5JY77 1395 aa14.74□□□□□ -0.05
PRKCH-227ENST00000557599 USP47Q96K76 1375 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms