RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 H3BM21 787 aa10.21□□□□□ -0.77
FOXN3-217ENST00000557572 ATP6V1AP38606 617 aa10.21□□□□□ -0.77
FOXN3-217ENST00000557572 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
FOXN3-217ENST00000557572 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
FOXN3-217ENST00000557572 BMP1P13497 986 aa10.19□□□□□ -0.78
FOXN3-217ENST00000557572 PXYLP1Q8TE99 480 aa10.19□□□□□ -0.78
FOXN3-217ENST00000557572 OATP04181 439 aa10.18□□□□□ -0.78
FOXN3-217ENST00000557572 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
FOXN3-217ENST00000557572 SALL2Q9Y467 1007 aaPredicted RBP10.17□□□□□ -0.78
FOXN3-217ENST00000557572 KCNMA1Q12791 1236 aa10.16□□□□□ -0.78
FOXN3-217ENST00000557572 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
FOXN3-217ENST00000557572 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
FOXN3-217ENST00000557572 TRIM46Q7Z4K8 759 aa10.16□□□□□ -0.78
FOXN3-217ENST00000557572 ALDH1A1P00352 501 aa10.15□□□□□ -0.78
FOXN3-217ENST00000557572 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
FOXN3-217ENST00000557572 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
FOXN3-217ENST00000557572 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
FOXN3-217ENST00000557572 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
FOXN3-217ENST00000557572 CAPN5O15484 640 aaPredicted RBP10.12□□□□□ -0.79
FOXN3-217ENST00000557572 FCHSD2O94868 740 aa10.11□□□□□ -0.79
FOXN3-217ENST00000557572 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
FOXN3-217ENST00000557572 GSK3AP49840 483 aa10.1□□□□□ -0.79
FOXN3-217ENST00000557572 SKOR1P84550 965 aa10.1□□□□□ -0.79
FOXN3-217ENST00000557572 TMEM151AQ8N4L1 468 aa10.1□□□□□ -0.79
FOXN3-217ENST00000557572 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
FOXN3-217ENST00000557572 DAXXQ9UER7 740 aaPredicted RBP10.09□□□□□ -0.79
FOXN3-217ENST00000557572 GDF11O95390 407 aa10.08□□□□□ -0.8
FOXN3-217ENST00000557572 GCGRP47871 477 aa10.08□□□□□ -0.8
FOXN3-217ENST00000557572 MMP16P51512 607 aa10.08□□□□□ -0.8
FOXN3-217ENST00000557572 WNT7BP56706 349 aa10.07□□□□□ -0.8
FOXN3-217ENST00000557572 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
FOXN3-217ENST00000557572 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
FOXN3-217ENST00000557572 RASSF7Q02833 373 aa10.05□□□□□ -0.8
FOXN3-217ENST00000557572 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
FOXN3-217ENST00000557572 Q3C1V9 767 aa10.03□□□□□ -0.8
FOXN3-217ENST00000557572 DXOO77932 396 aaKnown RBP10.01□□□□□ -0.81
FOXN3-217ENST00000557572 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
FOXN3-217ENST00000557572 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
FOXN3-217ENST00000557572 VSIG8P0DPA2 414 aa10□□□□□ -0.81
FOXN3-217ENST00000557572 EHBP1Q8NDI1 1231 aa10□□□□□ -0.81
FOXN3-217ENST00000557572 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
FOXN3-217ENST00000557572 SIAH2O43255 324 aa9.99□□□□□ -0.81
FOXN3-217ENST00000557572 USB1Q9BQ65 265 aaKnown RBP9.99□□□□□ -0.81
FOXN3-217ENST00000557572 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
FOXN3-217ENST00000557572 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
FOXN3-217ENST00000557572 HIC1Q14526 733 aa9.97□□□□□ -0.81
FOXN3-217ENST00000557572 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
FOXN3-217ENST00000557572 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
FOXN3-217ENST00000557572 SCARF1Q14162 830 aa9.95□□□□□ -0.82
FOXN3-217ENST00000557572 PURBQ96QR8 312 aaKnown RBP9.95□□□□□ -0.82
FOXN3-217ENST00000557572 GPAT2Q6NUI2 795 aa9.94□□□□□ -0.82
FOXN3-217ENST00000557572 XP32Q5T750 250 aa9.93□□□□□ -0.82
FOXN3-217ENST00000557572 MRPL14Q6P1L8 145 aaKnown RBP9.93□□□□□ -0.82
FOXN3-217ENST00000557572 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
FOXN3-217ENST00000557572 PAXIP1Q6ZW49 1069 aaPredicted RBP9.92□□□□□ -0.82
FOXN3-217ENST00000557572 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
FOXN3-217ENST00000557572 IGHA1P01876 353 aa9.87□□□□□ -0.83
FOXN3-217ENST00000557572 PTCRAQ6ISU1 281 aaPredicted RBP9.87□□□□□ -0.83
FOXN3-217ENST00000557572 GNPATO15228 680 aa9.86□□□□□ -0.83
FOXN3-217ENST00000557572 MAN1A2O60476 641 aa9.86□□□□□ -0.83
FOXN3-217ENST00000557572 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
FOXN3-217ENST00000557572 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
FOXN3-217ENST00000557572 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
FOXN3-217ENST00000557572 JUNDP17535 347 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 SH3BP2P78314 561 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 NNTQ13423 1086 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 CNTNAP3BQ96NU0 1288 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 CNTNAP3Q9BZ76 1288 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 TLL2Q9Y6L7 1015 aa9.84□□□□□ -0.83
FOXN3-217ENST00000557572 KDM4AO75164 1064 aa9.83□□□□□ -0.84
FOXN3-217ENST00000557572 IRS1P35568 1242 aa9.83□□□□□ -0.84
FOXN3-217ENST00000557572 WDR4P57081 412 aaKnown RBP9.83□□□□□ -0.84
FOXN3-217ENST00000557572 HLA-CQ95604 372 aa9.83□□□□□ -0.84
FOXN3-217ENST00000557572 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
FOXN3-217ENST00000557572 PLEKHG3A1L390 1219 aa9.81□□□□□ -0.84
FOXN3-217ENST00000557572 SEMA3EO15041 775 aa9.81□□□□□ -0.84
FOXN3-217ENST00000557572 TIMP2P16035 220 aa9.81□□□□□ -0.84
FOXN3-217ENST00000557572 ADH1CP00326 375 aa9.8□□□□□ -0.84
FOXN3-217ENST00000557572 KRT76Q01546 638 aa9.8□□□□□ -0.84
FOXN3-217ENST00000557572 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
FOXN3-217ENST00000557572 SVOPQ8N4V2 548 aa9.79□□□□□ -0.84
FOXN3-217ENST00000557572 CD46P15529 392 aa9.78□□□□□ -0.84
FOXN3-217ENST00000557572 FOXK2Q01167 660 aa9.78□□□□□ -0.84
FOXN3-217ENST00000557572 RBM26Q5T8P6 1007 aaKnown RBP9.78□□□□□ -0.84
FOXN3-217ENST00000557572 GPR161Q8N6U8 529 aaKnown RBP9.78□□□□□ -0.84
FOXN3-217ENST00000557572 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
FOXN3-217ENST00000557572 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
FOXN3-217ENST00000557572 GUCA2AQ02747 115 aa9.75□□□□□ -0.85
FOXN3-217ENST00000557572 ZNF385CQ66K41 422 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-217ENST00000557572 KRTAP4-8Q9BYQ9 185 aa9.75□□□□□ -0.85
FOXN3-217ENST00000557572 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
FOXN3-217ENST00000557572 USP46P62068 366 aa9.74□□□□□ -0.85
FOXN3-217ENST00000557572 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
FOXN3-217ENST00000557572 BAP1Q92560 729 aa9.74□□□□□ -0.85
FOXN3-217ENST00000557572 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
FOXN3-217ENST00000557572 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-217ENST00000557572 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-217ENST00000557572 HOXA2O43364 376 aa9.72□□□□□ -0.85
FOXN3-217ENST00000557572 BMP2P12643 396 aa9.72□□□□□ -0.85
FOXN3-217ENST00000557572 MPNDQ8N594 471 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms