RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 ATRNO75882 1429 aa11.28□□□□□ -0.6
PRKCH-225ENST00000557559 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
PRKCH-225ENST00000557559 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-225ENST00000557559 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
PRKCH-225ENST00000557559 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-225ENST00000557559 DDX17Q92841 729 aaKnown RBP11.27□□□□□ -0.61
PRKCH-225ENST00000557559 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
PRKCH-225ENST00000557559 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
PRKCH-225ENST00000557559 MYOM2P54296 1465 aa11.25□□□□□ -0.61
PRKCH-225ENST00000557559 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
PRKCH-225ENST00000557559 KIF1BO60333 1816 aa11.25□□□□□ -0.61
PRKCH-225ENST00000557559 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
PRKCH-225ENST00000557559 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
PRKCH-225ENST00000557559 NPHP3Q7Z494 1330 aa11.24□□□□□ -0.61
PRKCH-225ENST00000557559 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-225ENST00000557559 LRP5O75197 1615 aa11.22□□□□□ -0.61
PRKCH-225ENST00000557559 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
PRKCH-225ENST00000557559 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.61
PRKCH-225ENST00000557559 PXDNQ92626 1479 aa11.21□□□□□ -0.61
PRKCH-225ENST00000557559 ROBO2Q9HCK4 1378 aa11.21□□□□□ -0.61
PRKCH-225ENST00000557559 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
PRKCH-225ENST00000557559 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-225ENST00000557559 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
PRKCH-225ENST00000557559 KIF1AQ12756 1690 aa11.18□□□□□ -0.62
PRKCH-225ENST00000557559 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
PRKCH-225ENST00000557559 RALGAPBQ86X10 1494 aa11.18□□□□□ -0.62
PRKCH-225ENST00000557559 USP32Q8NFA0 1604 aa11.17□□□□□ -0.62
PRKCH-225ENST00000557559 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
PRKCH-225ENST00000557559 GLI3P10071 1580 aa11.17□□□□□ -0.62
PRKCH-225ENST00000557559 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
PRKCH-225ENST00000557559 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
PRKCH-225ENST00000557559 SLIT2O94813 1529 aa11.17□□□□□ -0.62
PRKCH-225ENST00000557559 PPLO60437 1756 aa11.16□□□□□ -0.62
PRKCH-225ENST00000557559 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
PRKCH-225ENST00000557559 UNC5CLQ8IV45 518 aa11.16□□□□□ -0.62
PRKCH-225ENST00000557559 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
PRKCH-225ENST00000557559 NAIPQ13075 1403 aa11.15□□□□□ -0.62
PRKCH-225ENST00000557559 TECPR2O15040 1411 aa11.14□□□□□ -0.63
PRKCH-225ENST00000557559 NWD2Q9ULI1 1742 aa11.14□□□□□ -0.63
PRKCH-225ENST00000557559 KNDC1Q76NI1 1749 aa11.13□□□□□ -0.63
PRKCH-225ENST00000557559 FOXO3O43524 673 aa11.13□□□□□ -0.63
PRKCH-225ENST00000557559 ITGAEP38570 1179 aa11.13□□□□□ -0.63
PRKCH-225ENST00000557559 BRWD3Q6RI45 1802 aa11.13□□□□□ -0.63
PRKCH-225ENST00000557559 FMN2Q9NZ56 1722 aa11.12□□□□□ -0.63
PRKCH-225ENST00000557559 PLCH1Q4KWH8 1693 aa11.12□□□□□ -0.63
PRKCH-225ENST00000557559 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
PRKCH-225ENST00000557559 SPATA31A3Q5VYP0 1347 aa11.1□□□□□ -0.63
PRKCH-225ENST00000557559 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
PRKCH-225ENST00000557559 BAG6P46379 1132 aa11.1□□□□□ -0.63
PRKCH-225ENST00000557559 XPCQ01831 940 aaPredicted RBP11.1□□□□□ -0.63
PRKCH-225ENST00000557559 VPS72Q15906 364 aa11.1□□□□□ -0.63
PRKCH-225ENST00000557559 RRBP1Q9P2E9 1410 aaKnown RBP11.09□□□□□ -0.63
PRKCH-225ENST00000557559 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
PRKCH-225ENST00000557559 KRT27Q7Z3Y8 459 aa11.09□□□□□ -0.63
PRKCH-225ENST00000557559 DEFB132Q7Z7B7 95 aa11.09□□□□□ -0.63
PRKCH-225ENST00000557559 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
PRKCH-225ENST00000557559 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
PRKCH-225ENST00000557559 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
PRKCH-225ENST00000557559 IFT172Q9UG01 1749 aa11.08□□□□□ -0.64
PRKCH-225ENST00000557559 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
PRKCH-225ENST00000557559 ANKRD30BQ9BXX2 1392 aa11.07□□□□□ -0.64
PRKCH-225ENST00000557559 PSME1Q06323 249 aa11.07□□□□□ -0.64
PRKCH-225ENST00000557559 CCDC9Q9Y3X0 531 aaKnown RBP11.07□□□□□ -0.64
PRKCH-225ENST00000557559 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
PRKCH-225ENST00000557559 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
PRKCH-225ENST00000557559 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-225ENST00000557559 A0A0G2JS52 829 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 HRCP23327 699 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 MYT1Q01538 1121 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 NRAPQ86VF7 1730 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
PRKCH-225ENST00000557559 DISP2A7MBM2 1401 aa11.04□□□□□ -0.64
PRKCH-225ENST00000557559 PIK3C2GO75747 1445 aa11.04□□□□□ -0.64
PRKCH-225ENST00000557559 COL14A1Q05707 1796 aaKnown RBP11.03□□□□□ -0.64
PRKCH-225ENST00000557559 YTHDC2Q9H6S0 1430 aaKnown RBP11.03□□□□□ -0.64
PRKCH-225ENST00000557559 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-225ENST00000557559 WAPLQ7Z5K2 1190 aa11.03□□□□□ -0.64
PRKCH-225ENST00000557559 STK26Q9P289 416 aa11.03□□□□□ -0.64
PRKCH-225ENST00000557559 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
PRKCH-225ENST00000557559 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
PRKCH-225ENST00000557559 PLEKHH1Q9ULM0 1364 aa11.02□□□□□ -0.65
PRKCH-225ENST00000557559 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
PRKCH-225ENST00000557559 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
PRKCH-225ENST00000557559 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
PRKCH-225ENST00000557559 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
PRKCH-225ENST00000557559 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
PRKCH-225ENST00000557559 RGPD8O14715 1765 aaPredicted RBP11□□□□□ -0.65
PRKCH-225ENST00000557559 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
PRKCH-225ENST00000557559 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
PRKCH-225ENST00000557559 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
PRKCH-225ENST00000557559 EIF3AQ14152 1382 aaKnown RBP11□□□□□ -0.65
PRKCH-225ENST00000557559 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
PRKCH-225ENST00000557559 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
PRKCH-225ENST00000557559 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
PRKCH-225ENST00000557559 TRPM3Q9HCF6 1732 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-225ENST00000557559 BTG4Q9NY30 223 aa10.98□□□□□ -0.65
PRKCH-225ENST00000557559 DHX57Q6P158 1386 aaKnown RBP10.98□□□□□ -0.65
PRKCH-225ENST00000557559 FAM83GA6ND36 823 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms