RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
SLIRP-210ENST00000557431 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
SLIRP-210ENST00000557431 NUTM2FA1L443 756 aa21.22■□□□□ 0.99
SLIRP-210ENST00000557431 ADGRF5Q8IZF2 1346 aa21.22■□□□□ 0.99
SLIRP-210ENST00000557431 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
SLIRP-210ENST00000557431 XPCQ01831 940 aaPredicted RBP21.21■□□□□ 0.99
SLIRP-210ENST00000557431 RPGRIP1LQ68CZ1 1315 aa21.21■□□□□ 0.99
SLIRP-210ENST00000557431 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
SLIRP-210ENST00000557431 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
SLIRP-210ENST00000557431 STK26Q9P289 416 aa21.2■□□□□ 0.98
SLIRP-210ENST00000557431 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
SLIRP-210ENST00000557431 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
SLIRP-210ENST00000557431 PXDNQ92626 1479 aa21.18■□□□□ 0.98
SLIRP-210ENST00000557431 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
SLIRP-210ENST00000557431 USP21Q9UK80 565 aa21.17■□□□□ 0.98
SLIRP-210ENST00000557431 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
SLIRP-210ENST00000557431 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
SLIRP-210ENST00000557431 MYOM2P54296 1465 aa21.15■□□□□ 0.98
SLIRP-210ENST00000557431 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
SLIRP-210ENST00000557431 BRWD3Q6RI45 1802 aa21.13■□□□□ 0.97
SLIRP-210ENST00000557431 FOXO3O43524 673 aa21.13■□□□□ 0.97
SLIRP-210ENST00000557431 ATRNO75882 1429 aa21.12■□□□□ 0.97
SLIRP-210ENST00000557431 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.11■□□□□ 0.97
SLIRP-210ENST00000557431 KIF1AQ12756 1690 aa21.11■□□□□ 0.97
SLIRP-210ENST00000557431 TECPR2O15040 1411 aa21.11■□□□□ 0.97
SLIRP-210ENST00000557431 LRPPRCP42704 1394 aaKnown RBP21.1■□□□□ 0.97
SLIRP-210ENST00000557431 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
SLIRP-210ENST00000557431 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
SLIRP-210ENST00000557431 PIK3C2GO75747 1445 aa21.1■□□□□ 0.97
SLIRP-210ENST00000557431 TRPC5Q9UL62 973 aaPredicted RBP21.09■□□□□ 0.97
SLIRP-210ENST00000557431 ABCA3Q99758 1704 aa21.09■□□□□ 0.97
SLIRP-210ENST00000557431 FNBP4Q8N3X1 1017 aaPredicted RBP21.08■□□□□ 0.97
SLIRP-210ENST00000557431 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
SLIRP-210ENST00000557431 YTHDC2Q9H6S0 1430 aaKnown RBP21.07■□□□□ 0.96
SLIRP-210ENST00000557431 PLCH1Q4KWH8 1693 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 PLEKHG5O94827 1062 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 ATAD2Q6PL18 1390 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 GLI3P10071 1580 aa21.06■□□□□ 0.96
SLIRP-210ENST00000557431 ABCC11Q96J66 1382 aa21.04■□□□□ 0.96
SLIRP-210ENST00000557431 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
SLIRP-210ENST00000557431 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
SLIRP-210ENST00000557431 SPATA31A3Q5VYP0 1347 aa21■□□□□ 0.95
SLIRP-210ENST00000557431 KRT28Q7Z3Y7 464 aa20.98■□□□□ 0.95
SLIRP-210ENST00000557431 CABLES1Q8TDN4 633 aa20.98■□□□□ 0.95
SLIRP-210ENST00000557431 RALGAPBQ86X10 1494 aa20.98■□□□□ 0.95
SLIRP-210ENST00000557431 EP400Q96L91 3159 aa20.98■□□□□ 0.95
SLIRP-210ENST00000557431 SLIT2O94813 1529 aa20.98■□□□□ 0.95
SLIRP-210ENST00000557431 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
SLIRP-210ENST00000557431 GJD4Q96KN9 370 aaPredicted RBP20.97■□□□□ 0.95
SLIRP-210ENST00000557431 NWD2Q9ULI1 1742 aa20.96■□□□□ 0.95
SLIRP-210ENST00000557431 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
SLIRP-210ENST00000557431 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.94
SLIRP-210ENST00000557431 TRPM3Q9HCF6 1732 aaPredicted RBP20.95■□□□□ 0.94
SLIRP-210ENST00000557431 PHF8Q9UPP1 1060 aa20.94■□□□□ 0.94
SLIRP-210ENST00000557431 NRAPQ86VF7 1730 aa20.93■□□□□ 0.94
SLIRP-210ENST00000557431 UNC5CLQ8IV45 518 aa20.93■□□□□ 0.94
SLIRP-210ENST00000557431 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
SLIRP-210ENST00000557431 LMOD2Q6P5Q4 547 aa20.92■□□□□ 0.94
SLIRP-210ENST00000557431 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
SLIRP-210ENST00000557431 HAP1P54257 671 aaPredicted RBP20.91■□□□□ 0.94
SLIRP-210ENST00000557431 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
SLIRP-210ENST00000557431 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
SLIRP-210ENST00000557431 ADGRB2O60241 1585 aa20.9■□□□□ 0.94
SLIRP-210ENST00000557431 ADGRB1O14514 1584 aa20.89■□□□□ 0.94
SLIRP-210ENST00000557431 DLC1Q96QB1 1528 aa20.89■□□□□ 0.94
SLIRP-210ENST00000557431 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
SLIRP-210ENST00000557431 CRYBG1Q9Y4K1 1723 aa20.89■□□□□ 0.93
SLIRP-210ENST00000557431 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
SLIRP-210ENST00000557431 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
SLIRP-210ENST00000557431 SIRT1Q96EB6 747 aa20.87■□□□□ 0.93
SLIRP-210ENST00000557431 POGKQ9P215 609 aa20.86■□□□□ 0.93
SLIRP-210ENST00000557431 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
SLIRP-210ENST00000557431 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
SLIRP-210ENST00000557431 CCDC9Q9Y3X0 531 aaKnown RBP20.86■□□□□ 0.93
SLIRP-210ENST00000557431 PSME1Q06323 249 aa20.85■□□□□ 0.93
SLIRP-210ENST00000557431 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
SLIRP-210ENST00000557431 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
SLIRP-210ENST00000557431 SEPT12Q8IYM1 358 aa20.84■□□□□ 0.93
SLIRP-210ENST00000557431 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
SLIRP-210ENST00000557431 SBNO1A3KN83 1393 aa20.84■□□□□ 0.93
SLIRP-210ENST00000557431 PRR36Q9H6K5 1346 aa20.83■□□□□ 0.93
SLIRP-210ENST00000557431 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
SLIRP-210ENST00000557431 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
SLIRP-210ENST00000557431 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
SLIRP-210ENST00000557431 COL14A1Q05707 1796 aaKnown RBP20.82■□□□□ 0.92
SLIRP-210ENST00000557431 VPS72Q15906 364 aa20.81■□□□□ 0.92
SLIRP-210ENST00000557431 TULP4Q9NRJ4 1543 aa20.8■□□□□ 0.92
SLIRP-210ENST00000557431 FAM83GA6ND36 823 aa20.8■□□□□ 0.92
SLIRP-210ENST00000557431 ARHGEF10O15013 1369 aa20.8■□□□□ 0.92
SLIRP-210ENST00000557431 CCDC125Q86Z20 511 aa20.79■□□□□ 0.92
SLIRP-210ENST00000557431 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
SLIRP-210ENST00000557431 A0A0G2JS52 829 aa20.78■□□□□ 0.92
SLIRP-210ENST00000557431 MYT1Q01538 1121 aa20.78■□□□□ 0.92
SLIRP-210ENST00000557431 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
SLIRP-210ENST00000557431 SRCAPQ6ZRS2 3230 aa20.77■□□□□ 0.92
SLIRP-210ENST00000557431 RGPD1P0DJD0 1748 aa20.75■□□□□ 0.91
SLIRP-210ENST00000557431 FAM98CQ17RN3 349 aaKnown RBP20.75■□□□□ 0.91
SLIRP-210ENST00000557431 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 349.1 ms