RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
PCNX1-215ENST00000557428 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
PCNX1-215ENST00000557428 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
PCNX1-215ENST00000557428 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
PCNX1-215ENST00000557428 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
PCNX1-215ENST00000557428 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
PCNX1-215ENST00000557428 MYOM2P54296 1465 aa12.35□□□□□ -0.43
PCNX1-215ENST00000557428 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
PCNX1-215ENST00000557428 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
PCNX1-215ENST00000557428 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
PCNX1-215ENST00000557428 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
PCNX1-215ENST00000557428 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
PCNX1-215ENST00000557428 NPHP3Q7Z494 1330 aa12.34□□□□□ -0.43
PCNX1-215ENST00000557428 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
PCNX1-215ENST00000557428 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
PCNX1-215ENST00000557428 DEFB132Q7Z7B7 95 aa12.33□□□□□ -0.44
PCNX1-215ENST00000557428 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-215ENST00000557428 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-215ENST00000557428 GLI3P10071 1580 aa12.33□□□□□ -0.44
PCNX1-215ENST00000557428 NUTM2FA1L443 756 aa12.32□□□□□ -0.44
PCNX1-215ENST00000557428 LRP5O75197 1615 aa12.32□□□□□ -0.44
PCNX1-215ENST00000557428 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
PCNX1-215ENST00000557428 PXDNQ92626 1479 aa12.32□□□□□ -0.44
PCNX1-215ENST00000557428 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
PCNX1-215ENST00000557428 HFM1A2PYH4 1435 aa12.3□□□□□ -0.44
PCNX1-215ENST00000557428 FOXO3O43524 673 aa12.3□□□□□ -0.44
PCNX1-215ENST00000557428 HAP1P54257 671 aaPredicted RBP12.3□□□□□ -0.44
PCNX1-215ENST00000557428 CCDC9Q9Y3X0 531 aaKnown RBP12.3□□□□□ -0.44
PCNX1-215ENST00000557428 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
PCNX1-215ENST00000557428 PPLO60437 1756 aa12.29□□□□□ -0.44
PCNX1-215ENST00000557428 A0A0G2JS52 829 aa12.29□□□□□ -0.44
PCNX1-215ENST00000557428 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
PCNX1-215ENST00000557428 MYT1Q01538 1121 aa12.29□□□□□ -0.44
PCNX1-215ENST00000557428 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
PCNX1-215ENST00000557428 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
PCNX1-215ENST00000557428 NAIPQ13075 1403 aa12.28□□□□□ -0.44
PCNX1-215ENST00000557428 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
PCNX1-215ENST00000557428 LRPPRCP42704 1394 aaKnown RBP12.27□□□□□ -0.45
PCNX1-215ENST00000557428 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
PCNX1-215ENST00000557428 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
PCNX1-215ENST00000557428 STK26Q9P289 416 aa12.26□□□□□ -0.45
PCNX1-215ENST00000557428 SLIT2O94813 1529 aa12.26□□□□□ -0.45
PCNX1-215ENST00000557428 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
PCNX1-215ENST00000557428 FMN2Q9NZ56 1722 aa12.25□□□□□ -0.45
PCNX1-215ENST00000557428 RGPD8O14715 1765 aaPredicted RBP12.24□□□□□ -0.45
PCNX1-215ENST00000557428 ABCA3Q99758 1704 aa12.24□□□□□ -0.45
PCNX1-215ENST00000557428 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
PCNX1-215ENST00000557428 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
PCNX1-215ENST00000557428 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
PCNX1-215ENST00000557428 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
PCNX1-215ENST00000557428 BAG6P46379 1132 aa12.23□□□□□ -0.45
PCNX1-215ENST00000557428 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
PCNX1-215ENST00000557428 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
PCNX1-215ENST00000557428 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
PCNX1-215ENST00000557428 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
PCNX1-215ENST00000557428 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
PCNX1-215ENST00000557428 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
PCNX1-215ENST00000557428 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
PCNX1-215ENST00000557428 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
PCNX1-215ENST00000557428 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
PCNX1-215ENST00000557428 HRCP23327 699 aa12.2□□□□□ -0.46
PCNX1-215ENST00000557428 VPS72Q15906 364 aa12.2□□□□□ -0.46
PCNX1-215ENST00000557428 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
PCNX1-215ENST00000557428 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
PCNX1-215ENST00000557428 NRAPQ86VF7 1730 aa12.18□□□□□ -0.46
PCNX1-215ENST00000557428 R3HDM1Q15032 1099 aaKnown RBP12.18□□□□□ -0.46
PCNX1-215ENST00000557428 FAM98CQ17RN3 349 aaKnown RBP12.18□□□□□ -0.46
PCNX1-215ENST00000557428 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
PCNX1-215ENST00000557428 ADGRF5Q8IZF2 1346 aa12.17□□□□□ -0.46
PCNX1-215ENST00000557428 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
PCNX1-215ENST00000557428 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
PCNX1-215ENST00000557428 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
PCNX1-215ENST00000557428 PSME1Q06323 249 aa12.16□□□□□ -0.46
PCNX1-215ENST00000557428 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
PCNX1-215ENST00000557428 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
PCNX1-215ENST00000557428 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
PCNX1-215ENST00000557428 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
PCNX1-215ENST00000557428 TECPR2O15040 1411 aa12.15□□□□□ -0.46
PCNX1-215ENST00000557428 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
PCNX1-215ENST00000557428 ARHGEF10O15013 1369 aa12.14□□□□□ -0.47
PCNX1-215ENST00000557428 ADGRB2O60241 1585 aa12.13□□□□□ -0.47
PCNX1-215ENST00000557428 COL14A1Q05707 1796 aaKnown RBP12.13□□□□□ -0.47
PCNX1-215ENST00000557428 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCNX1-215ENST00000557428 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
PCNX1-215ENST00000557428 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
PCNX1-215ENST00000557428 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
PCNX1-215ENST00000557428 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
PCNX1-215ENST00000557428 YY1P25490 414 aa12.12□□□□□ -0.47
PCNX1-215ENST00000557428 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
PCNX1-215ENST00000557428 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
PCNX1-215ENST00000557428 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
PCNX1-215ENST00000557428 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
PCNX1-215ENST00000557428 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
PCNX1-215ENST00000557428 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
PCNX1-215ENST00000557428 TRPM3Q9HCF6 1732 aaPredicted RBP12.1□□□□□ -0.47
PCNX1-215ENST00000557428 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
PCNX1-215ENST00000557428 ANKRD30BQ9BXX2 1392 aa12.09□□□□□ -0.47
PCNX1-215ENST00000557428 PIK3C2GO75747 1445 aa12.09□□□□□ -0.47
PCNX1-215ENST00000557428 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
PCNX1-215ENST00000557428 TRIM37O94972 964 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms