RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 CADPS2Q86UW7 1296 aa20.88■□□□□ 0.93
LGMN-215ENST00000557315 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
LGMN-215ENST00000557315 NHSL1Q5SYE7 1610 aa20.88■□□□□ 0.93
LGMN-215ENST00000557315 AHDC1Q5TGY3 1603 aaPredicted RBP20.88■□□□□ 0.93
LGMN-215ENST00000557315 PHLPP1O60346 1717 aa20.87■□□□□ 0.93
LGMN-215ENST00000557315 FMN2Q9NZ56 1722 aa20.87■□□□□ 0.93
LGMN-215ENST00000557315 TRPM1Q7Z4N2 1603 aa20.86■□□□□ 0.93
LGMN-215ENST00000557315 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
LGMN-215ENST00000557315 ATF3P18847 181 aa20.85■□□□□ 0.93
LGMN-215ENST00000557315 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
LGMN-215ENST00000557315 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
LGMN-215ENST00000557315 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
LGMN-215ENST00000557315 BRINP3Q76B58 766 aa20.84■□□□□ 0.93
LGMN-215ENST00000557315 ADGRB2O60241 1585 aa20.84■□□□□ 0.93
LGMN-215ENST00000557315 RGPD8O14715 1765 aaPredicted RBP20.82■□□□□ 0.92
LGMN-215ENST00000557315 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
LGMN-215ENST00000557315 USP32Q8NFA0 1604 aa20.81■□□□□ 0.92
LGMN-215ENST00000557315 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
LGMN-215ENST00000557315 TRAK1Q9UPV9 953 aa20.79■□□□□ 0.92
LGMN-215ENST00000557315 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
LGMN-215ENST00000557315 DDX17Q92841 729 aaKnown RBP20.76■□□□□ 0.91
LGMN-215ENST00000557315 ORAI2Q96SN7 254 aa20.76■□□□□ 0.91
LGMN-215ENST00000557315 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
LGMN-215ENST00000557315 SHPRHQ149N8 1683 aa20.74■□□□□ 0.91
LGMN-215ENST00000557315 NUTM2FA1L443 756 aa20.7■□□□□ 0.9
LGMN-215ENST00000557315 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.9
LGMN-215ENST00000557315 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
LGMN-215ENST00000557315 PXDNQ92626 1479 aa20.69■□□□□ 0.9
LGMN-215ENST00000557315 KIF1AQ12756 1690 aa20.69■□□□□ 0.9
LGMN-215ENST00000557315 PRR36Q9H6K5 1346 aa20.69■□□□□ 0.9
LGMN-215ENST00000557315 LRP6O75581 1613 aa20.68■□□□□ 0.9
LGMN-215ENST00000557315 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
LGMN-215ENST00000557315 POGKQ9P215 609 aa20.68■□□□□ 0.9
LGMN-215ENST00000557315 MINK1Q8N4C8 1332 aaPredicted RBP20.68■□□□□ 0.9
LGMN-215ENST00000557315 TONSLQ96HA7 1378 aa20.68■□□□□ 0.9
LGMN-215ENST00000557315 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
LGMN-215ENST00000557315 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
LGMN-215ENST00000557315 RGS17Q9UGC6 210 aaPredicted RBP20.67■□□□□ 0.9
LGMN-215ENST00000557315 JCADQ9P266 1359 aa20.67■□□□□ 0.9
LGMN-215ENST00000557315 SOS2Q07890 1332 aaPredicted RBP20.66■□□□□ 0.9
LGMN-215ENST00000557315 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
LGMN-215ENST00000557315 ATP7BP35670 1465 aa20.65■□□□□ 0.9
LGMN-215ENST00000557315 ANKARQ7Z5J8 1434 aa20.65■□□□□ 0.9
LGMN-215ENST00000557315 ROCK2O75116 1388 aaKnown RBP20.63■□□□□ 0.89
LGMN-215ENST00000557315 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
LGMN-215ENST00000557315 ESCO1Q5FWF5 840 aa20.63■□□□□ 0.89
LGMN-215ENST00000557315 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
LGMN-215ENST00000557315 COL22A1Q8NFW1 1626 aaPredicted RBP20.62■□□□□ 0.89
LGMN-215ENST00000557315 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
LGMN-215ENST00000557315 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
LGMN-215ENST00000557315 ITSN1Q15811 1721 aa20.6■□□□□ 0.89
LGMN-215ENST00000557315 FOXO3O43524 673 aa20.59■□□□□ 0.89
LGMN-215ENST00000557315 CENPJQ9HC77 1338 aaPredicted RBP20.58■□□□□ 0.89
LGMN-215ENST00000557315 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
LGMN-215ENST00000557315 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
LGMN-215ENST00000557315 PHF8Q9UPP1 1060 aa20.56■□□□□ 0.88
LGMN-215ENST00000557315 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
LGMN-215ENST00000557315 LRRC59Q96AG4 307 aaKnown RBP20.55■□□□□ 0.88
LGMN-215ENST00000557315 SPATA31A6Q5VVP1 1343 aa20.54■□□□□ 0.88
LGMN-215ENST00000557315 CDK19Q9BWU1 502 aa20.54■□□□□ 0.88
LGMN-215ENST00000557315 ALS2Q96Q42 1657 aa20.54■□□□□ 0.88
LGMN-215ENST00000557315 ABCA3Q99758 1704 aa20.53■□□□□ 0.88
LGMN-215ENST00000557315 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
LGMN-215ENST00000557315 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
LGMN-215ENST00000557315 NUDT16Q96DE0 195 aaKnown RBP20.51■□□□□ 0.87
LGMN-215ENST00000557315 CRYBG1Q9Y4K1 1723 aa20.5■□□□□ 0.87
LGMN-215ENST00000557315 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
LGMN-215ENST00000557315 MARF1Q9Y4F3 1742 aaKnown RBP20.5■□□□□ 0.87
LGMN-215ENST00000557315 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
LGMN-215ENST00000557315 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
LGMN-215ENST00000557315 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
LGMN-215ENST00000557315 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
LGMN-215ENST00000557315 SBNO1A3KN83 1393 aa20.47■□□□□ 0.87
LGMN-215ENST00000557315 POLR3AO14802 1390 aaPredicted RBP20.47■□□□□ 0.87
LGMN-215ENST00000557315 CABP2Q9NPB3 220 aa20.47■□□□□ 0.87
LGMN-215ENST00000557315 CCER1Q8TC90 406 aaPredicted RBP20.46■□□□□ 0.87
LGMN-215ENST00000557315 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
LGMN-215ENST00000557315 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
LGMN-215ENST00000557315 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
LGMN-215ENST00000557315 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
LGMN-215ENST00000557315 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
LGMN-215ENST00000557315 PLEKHG3A1L390 1219 aa20.44■□□□□ 0.86
LGMN-215ENST00000557315 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
LGMN-215ENST00000557315 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
LGMN-215ENST00000557315 TESK2Q96S53 571 aa20.43■□□□□ 0.86
LGMN-215ENST00000557315 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
LGMN-215ENST00000557315 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
LGMN-215ENST00000557315 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
LGMN-215ENST00000557315 ACEP12821 1306 aa20.41■□□□□ 0.86
LGMN-215ENST00000557315 NRKQ7Z2Y5 1582 aa20.4■□□□□ 0.86
LGMN-215ENST00000557315 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
LGMN-215ENST00000557315 USP47Q96K76 1375 aa20.39■□□□□ 0.85
LGMN-215ENST00000557315 PSME1Q06323 249 aa20.39■□□□□ 0.85
LGMN-215ENST00000557315 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
LGMN-215ENST00000557315 SSH2Q76I76 1423 aa20.38■□□□□ 0.85
LGMN-215ENST00000557315 ST20-MTHFSA0A0A6YYL1 179 aa20.38■□□□□ 0.85
LGMN-215ENST00000557315 NGDNQ8NEJ9 315 aaKnown RBP20.38■□□□□ 0.85
LGMN-215ENST00000557315 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
LGMN-215ENST00000557315 MON2Q7Z3U7 1717 aa20.37■□□□□ 0.85
LGMN-215ENST00000557315 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms