RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
LINC00640-204ENST00000557295 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
LINC00640-204ENST00000557295 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
LINC00640-204ENST00000557295 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
LINC00640-204ENST00000557295 HOXB3P14651 431 aaPredicted RBP11.13□□□□□ -0.63
LINC00640-204ENST00000557295 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
LINC00640-204ENST00000557295 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
LINC00640-204ENST00000557295 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
LINC00640-204ENST00000557295 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
LINC00640-204ENST00000557295 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
LINC00640-204ENST00000557295 MYO3AQ8NEV4 1616 aa11.11□□□□□ -0.63
LINC00640-204ENST00000557295 PREX2Q70Z35 1606 aa11.1□□□□□ -0.63
LINC00640-204ENST00000557295 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
LINC00640-204ENST00000557295 GGT6Q6P531 493 aa11.1□□□□□ -0.63
LINC00640-204ENST00000557295 A2MP01023 1474 aa11.1□□□□□ -0.63
LINC00640-204ENST00000557295 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
LINC00640-204ENST00000557295 PLXNC1O60486 1568 aa11.09□□□□□ -0.63
LINC00640-204ENST00000557295 HNRNPMP52272 730 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00640-204ENST00000557295 EMP3P54852 163 aa11.09□□□□□ -0.63
LINC00640-204ENST00000557295 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
LINC00640-204ENST00000557295 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
LINC00640-204ENST00000557295 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
LINC00640-204ENST00000557295 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
LINC00640-204ENST00000557295 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
LINC00640-204ENST00000557295 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
LINC00640-204ENST00000557295 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
LINC00640-204ENST00000557295 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
LINC00640-204ENST00000557295 ANKLE2Q86XL3 938 aa11.07□□□□□ -0.64
LINC00640-204ENST00000557295 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
LINC00640-204ENST00000557295 ZNF777Q9ULD5 760 aaPredicted RBP11.07□□□□□ -0.64
LINC00640-204ENST00000557295 ZMYND10O75800 440 aa11.06□□□□□ -0.64
LINC00640-204ENST00000557295 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
LINC00640-204ENST00000557295 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
LINC00640-204ENST00000557295 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
LINC00640-204ENST00000557295 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
LINC00640-204ENST00000557295 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
LINC00640-204ENST00000557295 TNRQ92752 1358 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 ATP7AQ04656 1500 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 SYCP2Q9BX26 1530 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 GPATCH8Q9UKJ3 1502 aaKnown RBP11.05□□□□□ -0.64
LINC00640-204ENST00000557295 EVI5O60447 810 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
LINC00640-204ENST00000557295 VWDEQ8N2E2 1590 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 DDX12PQ92771 950 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 MED14O60244 1454 aa11.05□□□□□ -0.64
LINC00640-204ENST00000557295 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
LINC00640-204ENST00000557295 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
LINC00640-204ENST00000557295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 CFDP1Q9UEE9 299 aaPredicted RBP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 CLTCQ00610 1675 aaKnown RBP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 INO80Q9ULG1 1556 aaPredicted RBP11.03□□□□□ -0.64
LINC00640-204ENST00000557295 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
LINC00640-204ENST00000557295 DHX29Q7Z478 1369 aaKnown RBP11.02□□□□□ -0.65
LINC00640-204ENST00000557295 PZPP20742 1482 aa11.01□□□□□ -0.65
LINC00640-204ENST00000557295 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
LINC00640-204ENST00000557295 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
LINC00640-204ENST00000557295 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
LINC00640-204ENST00000557295 NLRP1Q9C000 1473 aa11□□□□□ -0.65
LINC00640-204ENST00000557295 LRRC7Q96NW7 1537 aa11□□□□□ -0.65
LINC00640-204ENST00000557295 AK7Q96M32 723 aa11□□□□□ -0.65
LINC00640-204ENST00000557295 RTEL1-TNFRSF6BF6WH68 1400 aa11□□□□□ -0.65
LINC00640-204ENST00000557295 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
LINC00640-204ENST00000557295 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
LINC00640-204ENST00000557295 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
LINC00640-204ENST00000557295 FAM135AQ9P2D6 1515 aa10.99□□□□□ -0.65
LINC00640-204ENST00000557295 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
LINC00640-204ENST00000557295 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
LINC00640-204ENST00000557295 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
LINC00640-204ENST00000557295 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
LINC00640-204ENST00000557295 KIF3BO15066 747 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 SLC34A2O95436 690 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 PTGER2P43116 358 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 WASHC2CQ9Y4E1 1318 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 MBD5Q9P267 1494 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
LINC00640-204ENST00000557295 LRRIQ1Q96JM4 1722 aa10.96□□□□□ -0.65
LINC00640-204ENST00000557295 UGGT1Q9NYU2 1555 aa10.96□□□□□ -0.65
LINC00640-204ENST00000557295 KDM5DQ9BY66 1539 aa10.96□□□□□ -0.65
LINC00640-204ENST00000557295 FAM135BQ49AJ0 1406 aa10.95□□□□□ -0.66
LINC00640-204ENST00000557295 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
LINC00640-204ENST00000557295 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
LINC00640-204ENST00000557295 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
LINC00640-204ENST00000557295 POLR1AO95602 1720 aaPredicted RBP10.95□□□□□ -0.66
LINC00640-204ENST00000557295 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
LINC00640-204ENST00000557295 OSBPP22059 807 aa10.94□□□□□ -0.66
LINC00640-204ENST00000557295 ERBB3P21860 1342 aa10.93□□□□□ -0.66
LINC00640-204ENST00000557295 FCHSD2O94868 740 aa10.93□□□□□ -0.66
LINC00640-204ENST00000557295 SYNMO15061 1565 aa10.93□□□□□ -0.66
LINC00640-204ENST00000557295 ADGBQ8N7X0 1667 aa10.92□□□□□ -0.66
LINC00640-204ENST00000557295 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
LINC00640-204ENST00000557295 EPAS1Q99814 870 aa10.91□□□□□ -0.66
LINC00640-204ENST00000557295 MAP3K7O43318 606 aa10.9□□□□□ -0.66
LINC00640-204ENST00000557295 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
LINC00640-204ENST00000557295 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms