RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
PSEN1-221ENST00000557293 FOXD1Q16676 465 aa19.24■□□□□ 0.67
PSEN1-221ENST00000557293 PXDNQ92626 1479 aa19.22■□□□□ 0.67
PSEN1-221ENST00000557293 FOXO3O43524 673 aa19.22■□□□□ 0.67
PSEN1-221ENST00000557293 ESCO1Q5FWF5 840 aa19.22■□□□□ 0.67
PSEN1-221ENST00000557293 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
PSEN1-221ENST00000557293 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
PSEN1-221ENST00000557293 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-221ENST00000557293 EP400Q96L91 3159 aa19.18■□□□□ 0.66
PSEN1-221ENST00000557293 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
PSEN1-221ENST00000557293 KIF1BO60333 1816 aa19.18■□□□□ 0.66
PSEN1-221ENST00000557293 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
PSEN1-221ENST00000557293 DEFB132Q7Z7B7 95 aa19.17■□□□□ 0.66
PSEN1-221ENST00000557293 UNC5CLQ8IV45 518 aa19.17■□□□□ 0.66
PSEN1-221ENST00000557293 GLI3P10071 1580 aa19.17■□□□□ 0.66
PSEN1-221ENST00000557293 SLIT2O94813 1529 aa19.16■□□□□ 0.66
PSEN1-221ENST00000557293 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
PSEN1-221ENST00000557293 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
PSEN1-221ENST00000557293 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
PSEN1-221ENST00000557293 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
PSEN1-221ENST00000557293 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
PSEN1-221ENST00000557293 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
PSEN1-221ENST00000557293 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
PSEN1-221ENST00000557293 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.12■□□□□ 0.65
PSEN1-221ENST00000557293 NAIPQ13075 1403 aa19.12■□□□□ 0.65
PSEN1-221ENST00000557293 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
PSEN1-221ENST00000557293 SEPT12Q8IYM1 358 aa19.11■□□□□ 0.65
PSEN1-221ENST00000557293 BRWD3Q6RI45 1802 aa19.11■□□□□ 0.65
PSEN1-221ENST00000557293 ADGRF5Q8IZF2 1346 aa19.1■□□□□ 0.65
PSEN1-221ENST00000557293 PPLO60437 1756 aa19.09■□□□□ 0.65
PSEN1-221ENST00000557293 LRPPRCP42704 1394 aaKnown RBP19.09■□□□□ 0.65
PSEN1-221ENST00000557293 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
PSEN1-221ENST00000557293 KRT28Q7Z3Y7 464 aa19.08■□□□□ 0.64
PSEN1-221ENST00000557293 STK26Q9P289 416 aa19.08■□□□□ 0.64
PSEN1-221ENST00000557293 TECPR2O15040 1411 aa19.08■□□□□ 0.64
PSEN1-221ENST00000557293 VPS72Q15906 364 aa19.07■□□□□ 0.64
PSEN1-221ENST00000557293 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
PSEN1-221ENST00000557293 CABLES1Q8TDN4 633 aa19.06■□□□□ 0.64
PSEN1-221ENST00000557293 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
PSEN1-221ENST00000557293 KRT27Q7Z3Y8 459 aa19.03■□□□□ 0.64
PSEN1-221ENST00000557293 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
PSEN1-221ENST00000557293 LRP5O75197 1615 aa19.03■□□□□ 0.64
PSEN1-221ENST00000557293 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
PSEN1-221ENST00000557293 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
PSEN1-221ENST00000557293 FMN2Q9NZ56 1722 aa19.01■□□□□ 0.63
PSEN1-221ENST00000557293 PSDA5PKW4 1024 aaPredicted RBP19.01■□□□□ 0.63
PSEN1-221ENST00000557293 FAM83GA6ND36 823 aa19.01■□□□□ 0.63
PSEN1-221ENST00000557293 HRCP23327 699 aa19.01■□□□□ 0.63
PSEN1-221ENST00000557293 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
PSEN1-221ENST00000557293 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
PSEN1-221ENST00000557293 SIRT1Q96EB6 747 aa19■□□□□ 0.63
PSEN1-221ENST00000557293 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
PSEN1-221ENST00000557293 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
PSEN1-221ENST00000557293 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
PSEN1-221ENST00000557293 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
PSEN1-221ENST00000557293 KIF1AQ12756 1690 aa18.96■□□□□ 0.63
PSEN1-221ENST00000557293 PLEKHG5O94827 1062 aa18.96■□□□□ 0.63
PSEN1-221ENST00000557293 PSME1Q06323 249 aa18.96■□□□□ 0.63
PSEN1-221ENST00000557293 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
PSEN1-221ENST00000557293 YTHDC2Q9H6S0 1430 aaKnown RBP18.96■□□□□ 0.63
PSEN1-221ENST00000557293 SBNO1A3KN83 1393 aa18.95■□□□□ 0.62
PSEN1-221ENST00000557293 BAG6P46379 1132 aa18.95■□□□□ 0.62
PSEN1-221ENST00000557293 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
PSEN1-221ENST00000557293 PLCH1Q4KWH8 1693 aa18.95■□□□□ 0.62
PSEN1-221ENST00000557293 ANKRD30BQ9BXX2 1392 aa18.94■□□□□ 0.62
PSEN1-221ENST00000557293 KNDC1Q76NI1 1749 aa18.94■□□□□ 0.62
PSEN1-221ENST00000557293 NWD2Q9ULI1 1742 aa18.94■□□□□ 0.62
PSEN1-221ENST00000557293 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-221ENST00000557293 EN1Q05925 392 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-221ENST00000557293 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
PSEN1-221ENST00000557293 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
PSEN1-221ENST00000557293 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
PSEN1-221ENST00000557293 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
PSEN1-221ENST00000557293 C14orf93Q9H972 538 aaKnown RBP18.92■□□□□ 0.62
PSEN1-221ENST00000557293 IFT172Q9UG01 1749 aa18.91■□□□□ 0.62
PSEN1-221ENST00000557293 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
PSEN1-221ENST00000557293 ABCA3Q99758 1704 aa18.91■□□□□ 0.62
PSEN1-221ENST00000557293 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
PSEN1-221ENST00000557293 PMFBP1Q8TBY8 1022 aa18.89■□□□□ 0.61
PSEN1-221ENST00000557293 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
PSEN1-221ENST00000557293 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
PSEN1-221ENST00000557293 CFAP70Q5T0N1 1121 aa18.88■□□□□ 0.61
PSEN1-221ENST00000557293 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
PSEN1-221ENST00000557293 SPATA31A5Q5VU36 1347 aa18.86■□□□□ 0.61
PSEN1-221ENST00000557293 SPATA31A7Q8IWB4 1347 aa18.86■□□□□ 0.61
PSEN1-221ENST00000557293 A0A0G2JS52 829 aa18.86■□□□□ 0.61
PSEN1-221ENST00000557293 MYT1Q01538 1121 aa18.86■□□□□ 0.61
PSEN1-221ENST00000557293 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
PSEN1-221ENST00000557293 EZH2Q15910 746 aaKnown RBP18.85■□□□□ 0.61
PSEN1-221ENST00000557293 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
PSEN1-221ENST00000557293 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
PSEN1-221ENST00000557293 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
PSEN1-221ENST00000557293 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
PSEN1-221ENST00000557293 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
PSEN1-221ENST00000557293 TRPM3Q9HCF6 1732 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-221ENST00000557293 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
PSEN1-221ENST00000557293 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
PSEN1-221ENST00000557293 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
PSEN1-221ENST00000557293 THSD7AQ9UPZ6 1657 aa18.8■□□□□ 0.6
PSEN1-221ENST00000557293 COL14A1Q05707 1796 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms