RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
SCFD1-223ENST00000557076 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
SCFD1-223ENST00000557076 OATP04181 439 aa8.56□□□□□ -1.04
SCFD1-223ENST00000557076 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
SCFD1-223ENST00000557076 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
SCFD1-223ENST00000557076 CFHP08603 1231 aa8.55□□□□□ -1.04
SCFD1-223ENST00000557076 HIC1Q14526 733 aa8.55□□□□□ -1.04
SCFD1-223ENST00000557076 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
SCFD1-223ENST00000557076 TRAF7Q6Q0C0 670 aa8.55□□□□□ -1.04
SCFD1-223ENST00000557076 COL17A1Q9UMD9 1497 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-223ENST00000557076 ADAMTS12P58397 1594 aa8.55□□□□□ -1.04
SCFD1-223ENST00000557076 PTPRGP23470 1445 aa8.54□□□□□ -1.04
SCFD1-223ENST00000557076 ERICH3Q5RHP9 1530 aa8.54□□□□□ -1.04
SCFD1-223ENST00000557076 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
SCFD1-223ENST00000557076 PLB1Q6P1J6 1458 aa8.53□□□□□ -1.04
SCFD1-223ENST00000557076 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-223ENST00000557076 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
SCFD1-223ENST00000557076 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
SCFD1-223ENST00000557076 ADCY10Q96PN6 1610 aa8.53□□□□□ -1.04
SCFD1-223ENST00000557076 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
SCFD1-223ENST00000557076 SOCS7O14512 581 aa8.52□□□□□ -1.05
SCFD1-223ENST00000557076 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
SCFD1-223ENST00000557076 KIAA0586Q9BVV6 1533 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 TLL1O43897 1013 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 NR1I2O75469 434 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 ASXL2Q76L83 1435 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 LMTK3Q96Q04 1460 aa8.51□□□□□ -1.05
SCFD1-223ENST00000557076 SLC10A3P09131 477 aa8.5□□□□□ -1.05
SCFD1-223ENST00000557076 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
SCFD1-223ENST00000557076 TSPOAP1O95153 1857 aa8.49□□□□□ -1.05
SCFD1-223ENST00000557076 LCE2BO14633 110 aa8.49□□□□□ -1.05
SCFD1-223ENST00000557076 ADH1BP00325 375 aa8.49□□□□□ -1.05
SCFD1-223ENST00000557076 SLC19A1P41440 591 aa8.49□□□□□ -1.05
SCFD1-223ENST00000557076 GLI2P10070 1586 aa8.48□□□□□ -1.05
SCFD1-223ENST00000557076 GNPATO15228 680 aa8.48□□□□□ -1.05
SCFD1-223ENST00000557076 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
SCFD1-223ENST00000557076 ABCC2Q92887 1545 aa8.48□□□□□ -1.05
SCFD1-223ENST00000557076 IGF1RP08069 1367 aa8.48□□□□□ -1.05
SCFD1-223ENST00000557076 TNIKQ9UKE5 1360 aa8.48□□□□□ -1.05
SCFD1-223ENST00000557076 S1PR4O95977 384 aa8.47□□□□□ -1.05
SCFD1-223ENST00000557076 ILDR2Q71H61 639 aa8.47□□□□□ -1.05
SCFD1-223ENST00000557076 TTBK1Q5TCY1 1321 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-223ENST00000557076 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
SCFD1-223ENST00000557076 SPRYD7Q5W111 196 aa8.45□□□□□ -1.06
SCFD1-223ENST00000557076 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
SCFD1-223ENST00000557076 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
SCFD1-223ENST00000557076 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-223ENST00000557076 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
SCFD1-223ENST00000557076 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
SCFD1-223ENST00000557076 GPR37O15354 613 aa8.44□□□□□ -1.06
SCFD1-223ENST00000557076 SCUBE3Q8IX30 993 aa8.44□□□□□ -1.06
SCFD1-223ENST00000557076 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
SCFD1-223ENST00000557076 TOP2BQ02880 1626 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PRR20EP86478 221 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PRR20CP86479 221 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PRR20DP86480 221 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PRR20BP86481 221 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PRR20AP86496 221 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-223ENST00000557076 UACAQ9BZF9 1416 aa8.43□□□□□ -1.06
SCFD1-223ENST00000557076 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-223ENST00000557076 FECHP22830 423 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 SULF1Q8IWU6 871 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 SPSB2Q99619 263 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
SCFD1-223ENST00000557076 PPRC1Q5VV67 1664 aaKnown RBP8.41□□□□□ -1.06
SCFD1-223ENST00000557076 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
SCFD1-223ENST00000557076 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
SCFD1-223ENST00000557076 DISP3Q9P2K9 1392 aa8.4□□□□□ -1.06
SCFD1-223ENST00000557076 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
SCFD1-223ENST00000557076 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
SCFD1-223ENST00000557076 KDM5BQ9UGL1 1544 aa8.39□□□□□ -1.07
SCFD1-223ENST00000557076 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
SCFD1-223ENST00000557076 DGAT1O75907 488 aa8.39□□□□□ -1.07
SCFD1-223ENST00000557076 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
SCFD1-223ENST00000557076 CD109Q6YHK3 1445 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-223ENST00000557076 MORN1Q5T089 497 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 PTPRMP28827 1452 aa8.38□□□□□ -1.07
SCFD1-223ENST00000557076 FUT2Q10981 343 aa8.37□□□□□ -1.07
SCFD1-223ENST00000557076 BIVM-ERCC5R4GMW8 1640 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 MAGI3Q5TCQ9 1506 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 GDF9O60383 454 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-223ENST00000557076 GCGRP47871 477 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 LMOD2Q6P5Q4 547 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 KIF27Q86VH2 1401 aa8.36□□□□□ -1.07
SCFD1-223ENST00000557076 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
SCFD1-223ENST00000557076 PLA2G2CQ5R387 149 aa8.35□□□□□ -1.07
SCFD1-223ENST00000557076 THAP11Q96EK4 314 aa8.35□□□□□ -1.07
SCFD1-223ENST00000557076 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-223ENST00000557076 MAP3K4Q9Y6R4 1608 aa8.35□□□□□ -1.07
SCFD1-223ENST00000557076 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-223ENST00000557076 RPIAP49247 311 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms