RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.73
TMEM55B-207ENST00000557041 NPATQ14207 1427 aa19.63■□□□□ 0.73
TMEM55B-207ENST00000557041 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
TMEM55B-207ENST00000557041 SLKQ9H2G2 1235 aaPredicted RBP19.63■□□□□ 0.73
TMEM55B-207ENST00000557041 UHRF1BP1LA0JNW5 1464 aa19.63■□□□□ 0.73
TMEM55B-207ENST00000557041 ZFYVE16Q7Z3T8 1539 aa19.62■□□□□ 0.73
TMEM55B-207ENST00000557041 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
TMEM55B-207ENST00000557041 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
TMEM55B-207ENST00000557041 MS4A1P11836 297 aa19.61■□□□□ 0.73
TMEM55B-207ENST00000557041 IGHDP01880 384 aa19.61■□□□□ 0.73
TMEM55B-207ENST00000557041 PRDM15P57071 1507 aaPredicted RBP19.61■□□□□ 0.73
TMEM55B-207ENST00000557041 IQGAP3Q86VI3 1631 aa19.61■□□□□ 0.73
TMEM55B-207ENST00000557041 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
TMEM55B-207ENST00000557041 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
TMEM55B-207ENST00000557041 APBB1O00213 710 aa19.59■□□□□ 0.73
TMEM55B-207ENST00000557041 UNC13BO14795 1591 aa19.59■□□□□ 0.73
TMEM55B-207ENST00000557041 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
TMEM55B-207ENST00000557041 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
TMEM55B-207ENST00000557041 PRKAR2BP31323 418 aa19.58■□□□□ 0.73
TMEM55B-207ENST00000557041 PTPRTO14522 1441 aa19.58■□□□□ 0.72
TMEM55B-207ENST00000557041 RTN4Q9NQC3 1192 aaKnown RBP19.58■□□□□ 0.72
TMEM55B-207ENST00000557041 PLXNC1O60486 1568 aa19.58■□□□□ 0.72
TMEM55B-207ENST00000557041 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
TMEM55B-207ENST00000557041 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
TMEM55B-207ENST00000557041 ZKSCAN2Q63HK3 967 aa19.56■□□□□ 0.72
TMEM55B-207ENST00000557041 SLC26A8Q96RN1 970 aa19.56■□□□□ 0.72
TMEM55B-207ENST00000557041 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
TMEM55B-207ENST00000557041 YEATS2Q9ULM3 1422 aa19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 FYB1O15117 783 aa19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 RLBP1P12271 317 aa19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 TRPM2O94759 1503 aa19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 ERVK-7P63135 1459 aa19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 BLMP54132 1417 aaPredicted RBP19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 DZIP1LQ8IYY4 767 aaKnown RBP19.55■□□□□ 0.72
TMEM55B-207ENST00000557041 E9PCH4 1651 aa19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 RWDD1Q9H446 243 aaPredicted RBP19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 EMILIN1Q9Y6C2 1016 aa19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
TMEM55B-207ENST00000557041 NME9Q86XW9 330 aa19.53■□□□□ 0.72
TMEM55B-207ENST00000557041 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
TMEM55B-207ENST00000557041 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
TMEM55B-207ENST00000557041 MFAP1P55081 439 aaKnown RBP19.52■□□□□ 0.72
TMEM55B-207ENST00000557041 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.72
TMEM55B-207ENST00000557041 COG3Q96JB2 828 aa19.52■□□□□ 0.71
TMEM55B-207ENST00000557041 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
TMEM55B-207ENST00000557041 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
TMEM55B-207ENST00000557041 LTV1Q96GA3 475 aaPredicted RBP19.51■□□□□ 0.71
TMEM55B-207ENST00000557041 DCTN1Q14203 1278 aa19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 C1orf115Q9H7X2 142 aa19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 PIK3C2GO75747 1445 aa19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 PDE3AQ14432 1141 aa19.5■□□□□ 0.71
TMEM55B-207ENST00000557041 PDZRN3Q9UPQ7 1066 aa19.49■□□□□ 0.71
TMEM55B-207ENST00000557041 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
TMEM55B-207ENST00000557041 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
TMEM55B-207ENST00000557041 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
TMEM55B-207ENST00000557041 A0A1W2PP64 1363 aa19.48■□□□□ 0.71
TMEM55B-207ENST00000557041 POLR1AO95602 1720 aaPredicted RBP19.48■□□□□ 0.71
TMEM55B-207ENST00000557041 ZNF521Q96K83 1311 aa19.47■□□□□ 0.71
TMEM55B-207ENST00000557041 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
TMEM55B-207ENST00000557041 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
TMEM55B-207ENST00000557041 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
TMEM55B-207ENST00000557041 LNPKQ9C0E8 428 aa19.47■□□□□ 0.71
TMEM55B-207ENST00000557041 HDGFP51858 240 aaKnown RBP19.46■□□□□ 0.71
TMEM55B-207ENST00000557041 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
TMEM55B-207ENST00000557041 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
TMEM55B-207ENST00000557041 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
TMEM55B-207ENST00000557041 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
TMEM55B-207ENST00000557041 BECN1Q14457 450 aa19.45■□□□□ 0.7
TMEM55B-207ENST00000557041 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
TMEM55B-207ENST00000557041 MADDQ8WXG6 1647 aa19.44■□□□□ 0.7
TMEM55B-207ENST00000557041 NUDT16Q96DE0 195 aaKnown RBP19.44■□□□□ 0.7
TMEM55B-207ENST00000557041 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
TMEM55B-207ENST00000557041 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
TMEM55B-207ENST00000557041 FAM83GA6ND36 823 aa19.43■□□□□ 0.7
TMEM55B-207ENST00000557041 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 SEC24BO95487 1268 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 TRIM27P14373 513 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 SLC4A10Q6U841 1118 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
TMEM55B-207ENST00000557041 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
TMEM55B-207ENST00000557041 MVPQ14764 893 aaKnown RBP19.4■□□□□ 0.7
TMEM55B-207ENST00000557041 NPC1L1Q9UHC9 1359 aa19.4■□□□□ 0.7
TMEM55B-207ENST00000557041 C8orf34Q49A92 452 aa19.4■□□□□ 0.7
TMEM55B-207ENST00000557041 SULT6B1Q6IMI4 303 aa19.4■□□□□ 0.7
TMEM55B-207ENST00000557041 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.7
TMEM55B-207ENST00000557041 TET3O43151 1660 aa19.39■□□□□ 0.69
TMEM55B-207ENST00000557041 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
TMEM55B-207ENST00000557041 MIS18AQ9NYP9 233 aa19.39■□□□□ 0.69
TMEM55B-207ENST00000557041 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
TMEM55B-207ENST00000557041 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
TMEM55B-207ENST00000557041 NFKBIBQ15653 356 aa19.38■□□□□ 0.69
TMEM55B-207ENST00000557041 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
TMEM55B-207ENST00000557041 DDX19BQ9UMR2 479 aa19.38■□□□□ 0.69
TMEM55B-207ENST00000557041 AMPHP49418 695 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms