RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 BAG6P46379 1132 aa19.65■□□□□ 0.74
PSEN1-220ENST00000557037 ANKRD50Q9ULJ7 1429 aa19.65■□□□□ 0.74
PSEN1-220ENST00000557037 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.73
PSEN1-220ENST00000557037 E9PCH4 1651 aa19.63■□□□□ 0.73
PSEN1-220ENST00000557037 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
PSEN1-220ENST00000557037 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
PSEN1-220ENST00000557037 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
PSEN1-220ENST00000557037 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
PSEN1-220ENST00000557037 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
PSEN1-220ENST00000557037 SLIT2O94813 1529 aa19.61■□□□□ 0.73
PSEN1-220ENST00000557037 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
PSEN1-220ENST00000557037 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
PSEN1-220ENST00000557037 ADGRL2O95490 1459 aa19.6■□□□□ 0.73
PSEN1-220ENST00000557037 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
PSEN1-220ENST00000557037 PXDNQ92626 1479 aa19.59■□□□□ 0.73
PSEN1-220ENST00000557037 FOXO3O43524 673 aa19.58■□□□□ 0.72
PSEN1-220ENST00000557037 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
PSEN1-220ENST00000557037 A0A0G2JS52 829 aa19.57■□□□□ 0.72
PSEN1-220ENST00000557037 MYT1Q01538 1121 aa19.57■□□□□ 0.72
PSEN1-220ENST00000557037 VPS72Q15906 364 aa19.55■□□□□ 0.72
PSEN1-220ENST00000557037 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
PSEN1-220ENST00000557037 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
PSEN1-220ENST00000557037 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
PSEN1-220ENST00000557037 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
PSEN1-220ENST00000557037 FAM182BQ5T319 152 aa19.51■□□□□ 0.71
PSEN1-220ENST00000557037 IFFO2Q5TF58 517 aa19.51■□□□□ 0.71
PSEN1-220ENST00000557037 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
PSEN1-220ENST00000557037 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
PSEN1-220ENST00000557037 USP32Q8NFA0 1604 aa19.48■□□□□ 0.71
PSEN1-220ENST00000557037 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
PSEN1-220ENST00000557037 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
PSEN1-220ENST00000557037 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
PSEN1-220ENST00000557037 SPATA31A3Q5VYP0 1347 aa19.46■□□□□ 0.71
PSEN1-220ENST00000557037 NUP155O75694 1391 aa19.45■□□□□ 0.7
PSEN1-220ENST00000557037 LRPPRCP42704 1394 aaKnown RBP19.45■□□□□ 0.7
PSEN1-220ENST00000557037 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
PSEN1-220ENST00000557037 NEXMIFQ5QGS0 1516 aa19.45■□□□□ 0.7
PSEN1-220ENST00000557037 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
PSEN1-220ENST00000557037 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
PSEN1-220ENST00000557037 PLCH1Q4KWH8 1693 aa19.43■□□□□ 0.7
PSEN1-220ENST00000557037 APLP2Q06481 763 aa19.43■□□□□ 0.7
PSEN1-220ENST00000557037 HFM1A2PYH4 1435 aa19.42■□□□□ 0.7
PSEN1-220ENST00000557037 PPP1R1BQ9UD71 204 aaPredicted RBP19.42■□□□□ 0.7
PSEN1-220ENST00000557037 CDC42BPGQ6DT37 1551 aa19.4■□□□□ 0.7
PSEN1-220ENST00000557037 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
PSEN1-220ENST00000557037 CAMKK2Q96RR4 588 aa19.4■□□□□ 0.7
PSEN1-220ENST00000557037 NWD2Q9ULI1 1742 aa19.39■□□□□ 0.7
PSEN1-220ENST00000557037 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
PSEN1-220ENST00000557037 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
PSEN1-220ENST00000557037 NAIPQ13075 1403 aa19.38■□□□□ 0.69
PSEN1-220ENST00000557037 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
PSEN1-220ENST00000557037 LMOD2Q6P5Q4 547 aa19.37■□□□□ 0.69
PSEN1-220ENST00000557037 ZNF784Q8NCA9 323 aaPredicted RBP19.37■□□□□ 0.69
PSEN1-220ENST00000557037 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
PSEN1-220ENST00000557037 CCDC144AA2RUR9 1427 aa19.35■□□□□ 0.69
PSEN1-220ENST00000557037 TRIM37O94972 964 aa19.35■□□□□ 0.69
PSEN1-220ENST00000557037 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
PSEN1-220ENST00000557037 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
PSEN1-220ENST00000557037 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
PSEN1-220ENST00000557037 APBA3O96018 575 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 SPON1Q9HCB6 807 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 BTG4Q9NY30 223 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.68
PSEN1-220ENST00000557037 STK26Q9P289 416 aa19.32■□□□□ 0.68
PSEN1-220ENST00000557037 NINLQ9Y2I6 1382 aa19.32■□□□□ 0.68
PSEN1-220ENST00000557037 KCNQ2O43526 872 aa19.3■□□□□ 0.68
PSEN1-220ENST00000557037 NRAPQ86VF7 1730 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 ADGRB2O60241 1585 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 C1QTNF8P60827 252 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 PSME1Q06323 249 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 NBPF14Q5TI25 921 aa19.29■□□□□ 0.68
PSEN1-220ENST00000557037 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
PSEN1-220ENST00000557037 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
PSEN1-220ENST00000557037 KIF1BO60333 1816 aa19.28■□□□□ 0.68
PSEN1-220ENST00000557037 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
PSEN1-220ENST00000557037 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
PSEN1-220ENST00000557037 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
PSEN1-220ENST00000557037 FAM196AQ6ZSG2 479 aa19.26■□□□□ 0.67
PSEN1-220ENST00000557037 PHF8Q9UPP1 1060 aa19.26■□□□□ 0.67
PSEN1-220ENST00000557037 ROCK1Q13464 1354 aa19.26■□□□□ 0.67
PSEN1-220ENST00000557037 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
PSEN1-220ENST00000557037 ARHGEF10O15013 1369 aa19.24■□□□□ 0.67
PSEN1-220ENST00000557037 NUP188Q5SRE5 1749 aa19.24■□□□□ 0.67
PSEN1-220ENST00000557037 FMN2Q9NZ56 1722 aa19.24■□□□□ 0.67
PSEN1-220ENST00000557037 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
PSEN1-220ENST00000557037 SBNO1A3KN83 1393 aa19.23■□□□□ 0.67
PSEN1-220ENST00000557037 RREB1Q92766 1687 aa19.23■□□□□ 0.67
PSEN1-220ENST00000557037 ITGAEP38570 1179 aa19.22■□□□□ 0.67
PSEN1-220ENST00000557037 RGPD8O14715 1765 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-220ENST00000557037 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
PSEN1-220ENST00000557037 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
PSEN1-220ENST00000557037 TMEM132EQ6IEE7 984 aa19.18■□□□□ 0.66
PSEN1-220ENST00000557037 TECPR2O15040 1411 aa19.17■□□□□ 0.66
PSEN1-220ENST00000557037 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
PSEN1-220ENST00000557037 PPLO60437 1756 aa19.16■□□□□ 0.66
PSEN1-220ENST00000557037 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
PSEN1-220ENST00000557037 ADGRF5Q8IZF2 1346 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms