RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 C6orf132Q5T0Z8 1188 aa8.18□□□□□ -1.1
ATXN3-244ENST00000556898 MTUS2Q5JR59 1369 aa8.18□□□□□ -1.1
ATXN3-244ENST00000556898 TROQ12816 1431 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-244ENST00000556898 EHBP1L1Q8N3D4 1523 aa8.17□□□□□ -1.1
ATXN3-244ENST00000556898 KIF14Q15058 1648 aa8.17□□□□□ -1.1
ATXN3-244ENST00000556898 RGS20O76081 388 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 ANKK1Q8NFD2 765 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
ATXN3-244ENST00000556898 SEPT9Q9UHD8 586 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-244ENST00000556898 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-244ENST00000556898 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-244ENST00000556898 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
ATXN3-244ENST00000556898 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-244ENST00000556898 HAP1P54257 671 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-244ENST00000556898 DDX12PQ92771 950 aa8.15□□□□□ -1.1
ATXN3-244ENST00000556898 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
ATXN3-244ENST00000556898 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
ATXN3-244ENST00000556898 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-244ENST00000556898 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-244ENST00000556898 LAPTM4BQ86VI4 370 aa8.14□□□□□ -1.11
ATXN3-244ENST00000556898 EPAS1Q99814 870 aa8.14□□□□□ -1.11
ATXN3-244ENST00000556898 WBP1LQ9NX94 342 aa8.14□□□□□ -1.11
ATXN3-244ENST00000556898 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-244ENST00000556898 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-244ENST00000556898 SUPT6HQ7KZ85 1726 aaKnown RBP8.12□□□□□ -1.11
ATXN3-244ENST00000556898 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
ATXN3-244ENST00000556898 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-244ENST00000556898 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-244ENST00000556898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATXN3-244ENST00000556898 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-244ENST00000556898 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
ATXN3-244ENST00000556898 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
ATXN3-244ENST00000556898 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-244ENST00000556898 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-244ENST00000556898 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-244ENST00000556898 CCNB3Q8WWL7 1395 aa8.1□□□□□ -1.11
ATXN3-244ENST00000556898 ZNF644Q9H582 1327 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-244ENST00000556898 GPATCH8Q9UKJ3 1502 aaKnown RBP8.1□□□□□ -1.11
ATXN3-244ENST00000556898 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-244ENST00000556898 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-244ENST00000556898 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 PRIM1P49642 420 aaKnown RBP8.09□□□□□ -1.11
ATXN3-244ENST00000556898 TRIM26Q12899 539 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-244ENST00000556898 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
ATXN3-244ENST00000556898 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-244ENST00000556898 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 MYOM3Q5VTT5 1437 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-244ENST00000556898 ITGAEP38570 1179 aa8.08□□□□□ -1.12
ATXN3-244ENST00000556898 FAM50AQ14320 339 aaKnown RBP8.08□□□□□ -1.12
ATXN3-244ENST00000556898 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
ATXN3-244ENST00000556898 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-244ENST00000556898 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
ATXN3-244ENST00000556898 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
ATXN3-244ENST00000556898 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-244ENST00000556898 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-244ENST00000556898 C3orf80F5H4A9 247 aa8.07□□□□□ -1.12
ATXN3-244ENST00000556898 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
ATXN3-244ENST00000556898 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-244ENST00000556898 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
ATXN3-244ENST00000556898 EN1Q05925 392 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-244ENST00000556898 NBR1Q14596 966 aa8.06□□□□□ -1.12
ATXN3-244ENST00000556898 PDIA6Q15084 440 aa8.06□□□□□ -1.12
ATXN3-244ENST00000556898 CFDP1Q9UEE9 299 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-244ENST00000556898 KDM2AQ9Y2K7 1162 aa8.06□□□□□ -1.12
ATXN3-244ENST00000556898 PTPN23Q9H3S7 1636 aa8.05□□□□□ -1.12
ATXN3-244ENST00000556898 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
ATXN3-244ENST00000556898 MAP3K7O43318 606 aa8.05□□□□□ -1.12
ATXN3-244ENST00000556898 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-244ENST00000556898 TSR3Q9UJK0 312 aaKnown RBP8.05□□□□□ -1.12
ATXN3-244ENST00000556898 HPS5Q9UPZ3 1129 aa8.05□□□□□ -1.12
ATXN3-244ENST00000556898 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
ATXN3-244ENST00000556898 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 ARHGAP5Q13017 1502 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 PREX2Q70Z35 1606 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 SMAPO00193 183 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 HNRNPMP52272 730 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATXN3-244ENST00000556898 KCNC4Q03721 635 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 CAMSAP2Q08AD1 1489 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 TCOF1Q13428 1488 aaKnown RBP8.04□□□□□ -1.12
ATXN3-244ENST00000556898 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
ATXN3-244ENST00000556898 PTPRKQ15262 1439 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 MIA2Q96PC5 1412 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 MYO5CQ9NQX4 1742 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 ITSN2Q9NZM3 1697 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
ATXN3-244ENST00000556898 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
ATXN3-244ENST00000556898 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
ATXN3-244ENST00000556898 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms