RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 NKTRP30414 1462 aaKnown RBP10.73□□□□□ -0.69
PCNX1-213ENST00000556846 PHF12Q96QT6 1004 aa10.72□□□□□ -0.69
PCNX1-213ENST00000556846 C19orf44Q9H6X5 657 aa10.72□□□□□ -0.69
PCNX1-213ENST00000556846 HFM1A2PYH4 1435 aa10.71□□□□□ -0.69
PCNX1-213ENST00000556846 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-213ENST00000556846 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
PCNX1-213ENST00000556846 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
PCNX1-213ENST00000556846 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
PCNX1-213ENST00000556846 PIK3R4Q99570 1358 aa10.71□□□□□ -0.69
PCNX1-213ENST00000556846 MED1Q15648 1581 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-213ENST00000556846 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-213ENST00000556846 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
PCNX1-213ENST00000556846 NWD1Q149M9 1564 aa10.69□□□□□ -0.7
PCNX1-213ENST00000556846 NCOA3Q9Y6Q9 1424 aa10.68□□□□□ -0.7
PCNX1-213ENST00000556846 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
PCNX1-213ENST00000556846 TRPM2O94759 1503 aa10.68□□□□□ -0.7
PCNX1-213ENST00000556846 MYO5BQ9ULV0 1848 aa10.68□□□□□ -0.7
PCNX1-213ENST00000556846 RPGRIP1LQ68CZ1 1315 aa10.67□□□□□ -0.7
PCNX1-213ENST00000556846 XIRP1Q702N8 1843 aaKnown RBP10.67□□□□□ -0.7
PCNX1-213ENST00000556846 METP08581 1390 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 DIP2AQ14689 1571 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 RGL3Q3MIN7 710 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 SPHKAPQ2M3C7 1700 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
PCNX1-213ENST00000556846 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.71
PCNX1-213ENST00000556846 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
PCNX1-213ENST00000556846 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
PCNX1-213ENST00000556846 ASTLQ6HA08 431 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-213ENST00000556846 JCADQ9P266 1359 aa10.64□□□□□ -0.71
PCNX1-213ENST00000556846 ACIN1Q9UKV3 1341 aaKnown RBP10.63□□□□□ -0.71
PCNX1-213ENST00000556846 CLTCL1P53675 1640 aa10.63□□□□□ -0.71
PCNX1-213ENST00000556846 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
PCNX1-213ENST00000556846 MAMSTRQ6ZN01 415 aa10.63□□□□□ -0.71
PCNX1-213ENST00000556846 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
PCNX1-213ENST00000556846 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
PCNX1-213ENST00000556846 BRINP3Q76B58 766 aa10.62□□□□□ -0.71
PCNX1-213ENST00000556846 RGS17Q9UGC6 210 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-213ENST00000556846 NUTM2BA6NNL0 878 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-213ENST00000556846 NUTM2EB1AL46 878 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-213ENST00000556846 NUTM2AQ8IVF1 878 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-213ENST00000556846 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
PCNX1-213ENST00000556846 SETD5Q9C0A6 1442 aa10.6□□□□□ -0.71
PCNX1-213ENST00000556846 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-213ENST00000556846 STK26Q9P289 416 aa10.6□□□□□ -0.71
PCNX1-213ENST00000556846 METRNQ9UJH8 293 aa10.6□□□□□ -0.71
PCNX1-213ENST00000556846 SPATA31A6Q5VVP1 1343 aa10.59□□□□□ -0.71
PCNX1-213ENST00000556846 C7P10643 843 aa10.59□□□□□ -0.71
PCNX1-213ENST00000556846 POTEAQ6S8J7 498 aa10.59□□□□□ -0.71
PCNX1-213ENST00000556846 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
PCNX1-213ENST00000556846 LRRC59Q96AG4 307 aaKnown RBP10.59□□□□□ -0.71
PCNX1-213ENST00000556846 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
PCNX1-213ENST00000556846 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.71
PCNX1-213ENST00000556846 DCCP43146 1447 aa10.58□□□□□ -0.72
PCNX1-213ENST00000556846 NRXN3Q9Y4C0 1643 aa10.58□□□□□ -0.72
PCNX1-213ENST00000556846 PHLPP1O60346 1717 aa10.58□□□□□ -0.72
PCNX1-213ENST00000556846 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-213ENST00000556846 KIF1BO60333 1816 aa10.58□□□□□ -0.72
PCNX1-213ENST00000556846 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
PCNX1-213ENST00000556846 ROBO2Q9HCK4 1378 aa10.57□□□□□ -0.72
PCNX1-213ENST00000556846 DDX17Q92841 729 aaKnown RBP10.57□□□□□ -0.72
PCNX1-213ENST00000556846 ADGRL3Q9HAR2 1447 aa10.57□□□□□ -0.72
PCNX1-213ENST00000556846 ZNF772Q68DY9 489 aaPredicted RBP10.56□□□□□ -0.72
PCNX1-213ENST00000556846 TMEM132EQ6IEE7 984 aa10.56□□□□□ -0.72
PCNX1-213ENST00000556846 ORAI2Q96SN7 254 aa10.56□□□□□ -0.72
PCNX1-213ENST00000556846 MST1RQ04912 1400 aa10.56□□□□□ -0.72
PCNX1-213ENST00000556846 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
PCNX1-213ENST00000556846 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
PCNX1-213ENST00000556846 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
PCNX1-213ENST00000556846 WAPLQ7Z5K2 1190 aa10.55□□□□□ -0.72
PCNX1-213ENST00000556846 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
PCNX1-213ENST00000556846 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
PCNX1-213ENST00000556846 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
PCNX1-213ENST00000556846 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
PCNX1-213ENST00000556846 SPATA31E1Q6ZUB1 1445 aa10.53□□□□□ -0.72
PCNX1-213ENST00000556846 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-213ENST00000556846 AHDC1Q5TGY3 1603 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-213ENST00000556846 C1orf167Q5SNV9 1468 aa10.53□□□□□ -0.72
PCNX1-213ENST00000556846 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
PCNX1-213ENST00000556846 C14orf93Q9H972 538 aaKnown RBP10.52□□□□□ -0.73
PCNX1-213ENST00000556846 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
PCNX1-213ENST00000556846 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 RXRBP28702 533 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 NGLY1Q96IV0 654 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 LRPPRCP42704 1394 aaKnown RBP10.51□□□□□ -0.73
PCNX1-213ENST00000556846 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
PCNX1-213ENST00000556846 ABCC11Q96J66 1382 aa10.51□□□□□ -0.73
PCNX1-213ENST00000556846 FOXO3O43524 673 aa10.5□□□□□ -0.73
PCNX1-213ENST00000556846 DCAF11Q8TEB1 546 aa10.5□□□□□ -0.73
PCNX1-213ENST00000556846 POGKQ9P215 609 aa10.5□□□□□ -0.73
PCNX1-213ENST00000556846 LRP6O75581 1613 aa10.5□□□□□ -0.73
PCNX1-213ENST00000556846 HRCP23327 699 aa10.49□□□□□ -0.73
PCNX1-213ENST00000556846 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-213ENST00000556846 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
PCNX1-213ENST00000556846 AFF2P51816 1311 aa10.49□□□□□ -0.73
PCNX1-213ENST00000556846 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-213ENST00000556846 NPHP3Q7Z494 1330 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms