RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 MED1Q15648 1581 aaPredicted RBP15.58■□□□□ 0.08
IFT43-212ENST00000556742 STK26Q9P289 416 aa15.57■□□□□ 0.08
IFT43-212ENST00000556742 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
IFT43-212ENST00000556742 C1orf167Q5SNV9 1468 aa15.56■□□□□ 0.08
IFT43-212ENST00000556742 RGPD8O14715 1765 aaPredicted RBP15.55■□□□□ 0.08
IFT43-212ENST00000556742 ADGRB2O60241 1585 aa15.55■□□□□ 0.08
IFT43-212ENST00000556742 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
IFT43-212ENST00000556742 WAPLQ7Z5K2 1190 aa15.54■□□□□ 0.08
IFT43-212ENST00000556742 TRPM1Q7Z4N2 1603 aa15.54■□□□□ 0.08
IFT43-212ENST00000556742 PLEKHH1Q9ULM0 1364 aa15.53■□□□□ 0.08
IFT43-212ENST00000556742 KIF1AQ12756 1690 aa15.52■□□□□ 0.08
IFT43-212ENST00000556742 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
IFT43-212ENST00000556742 JCADQ9P266 1359 aa15.5■□□□□ 0.07
IFT43-212ENST00000556742 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
IFT43-212ENST00000556742 L3MBTL2Q969R5 705 aa15.5■□□□□ 0.07
IFT43-212ENST00000556742 PRAM1Q96QH2 718 aa15.49■□□□□ 0.07
IFT43-212ENST00000556742 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
IFT43-212ENST00000556742 TRAK1Q9UPV9 953 aa15.48■□□□□ 0.07
IFT43-212ENST00000556742 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
IFT43-212ENST00000556742 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
IFT43-212ENST00000556742 POGKQ9P215 609 aa15.47■□□□□ 0.07
IFT43-212ENST00000556742 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
IFT43-212ENST00000556742 ORAI2Q96SN7 254 aa15.45■□□□□ 0.06
IFT43-212ENST00000556742 SPATA31A6Q5VVP1 1343 aa15.44■□□□□ 0.06
IFT43-212ENST00000556742 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
IFT43-212ENST00000556742 LRRC59Q96AG4 307 aaKnown RBP15.44■□□□□ 0.06
IFT43-212ENST00000556742 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
IFT43-212ENST00000556742 TULP4Q9NRJ4 1543 aa15.43■□□□□ 0.06
IFT43-212ENST00000556742 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
IFT43-212ENST00000556742 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
IFT43-212ENST00000556742 NBPF1Q3BBV0 1214 aa15.43■□□□□ 0.06
IFT43-212ENST00000556742 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
IFT43-212ENST00000556742 EIF3AQ14152 1382 aaKnown RBP15.43■□□□□ 0.06
IFT43-212ENST00000556742 NPHP3Q7Z494 1330 aa15.43■□□□□ 0.06
IFT43-212ENST00000556742 PXDNQ92626 1479 aa15.42■□□□□ 0.06
IFT43-212ENST00000556742 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
IFT43-212ENST00000556742 TOPAZ1Q8N9V7 1692 aa15.41■□□□□ 0.06
IFT43-212ENST00000556742 DDX17Q92841 729 aaKnown RBP15.4■□□□□ 0.06
IFT43-212ENST00000556742 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
IFT43-212ENST00000556742 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
IFT43-212ENST00000556742 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
IFT43-212ENST00000556742 LRP6O75581 1613 aa15.39■□□□□ 0.05
IFT43-212ENST00000556742 NUTM2FA1L443 756 aa15.39■□□□□ 0.05
IFT43-212ENST00000556742 WASLO00401 505 aaPredicted RBP15.39■□□□□ 0.05
IFT43-212ENST00000556742 MINK1Q8N4C8 1332 aaPredicted RBP15.39■□□□□ 0.05
IFT43-212ENST00000556742 GPRASP1Q5JY77 1395 aa15.38■□□□□ 0.05
IFT43-212ENST00000556742 PNPLA6Q8IY17 1366 aa15.38■□□□□ 0.05
IFT43-212ENST00000556742 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
IFT43-212ENST00000556742 ROCK2O75116 1388 aaKnown RBP15.37■□□□□ 0.05
IFT43-212ENST00000556742 FOXO3O43524 673 aa15.37■□□□□ 0.05
IFT43-212ENST00000556742 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
IFT43-212ENST00000556742 ATP7BP35670 1465 aa15.37■□□□□ 0.05
IFT43-212ENST00000556742 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
IFT43-212ENST00000556742 PHF8Q9UPP1 1060 aa15.36■□□□□ 0.05
IFT43-212ENST00000556742 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
IFT43-212ENST00000556742 NBPF8Q3BBV2 869 aa15.35■□□□□ 0.05
IFT43-212ENST00000556742 ALS2Q96Q42 1657 aa15.34■□□□□ 0.05
IFT43-212ENST00000556742 ABCA3Q99758 1704 aa15.33■□□□□ 0.04
IFT43-212ENST00000556742 PRR36Q9H6K5 1346 aa15.33■□□□□ 0.04
IFT43-212ENST00000556742 ILDR2Q71H61 639 aa15.32■□□□□ 0.04
IFT43-212ENST00000556742 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
IFT43-212ENST00000556742 PSME1Q06323 249 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 CDK19Q9BWU1 502 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 RGS17Q9UGC6 210 aaPredicted RBP15.31■□□□□ 0.04
IFT43-212ENST00000556742 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
IFT43-212ENST00000556742 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
IFT43-212ENST00000556742 SBNO2Q9Y2G9 1366 aa15.3■□□□□ 0.04
IFT43-212ENST00000556742 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
IFT43-212ENST00000556742 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
IFT43-212ENST00000556742 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
IFT43-212ENST00000556742 CRYBG1Q9Y4K1 1723 aa15.29■□□□□ 0.04
IFT43-212ENST00000556742 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
IFT43-212ENST00000556742 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
IFT43-212ENST00000556742 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
IFT43-212ENST00000556742 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
IFT43-212ENST00000556742 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
IFT43-212ENST00000556742 POLR3AO14802 1390 aaPredicted RBP15.27■□□□□ 0.04
IFT43-212ENST00000556742 ARHGEF10O15013 1369 aa15.27■□□□□ 0.04
IFT43-212ENST00000556742 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
IFT43-212ENST00000556742 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
IFT43-212ENST00000556742 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
IFT43-212ENST00000556742 PLEKHG3A1L390 1219 aa15.25■□□□□ 0.03
IFT43-212ENST00000556742 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
IFT43-212ENST00000556742 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
IFT43-212ENST00000556742 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
IFT43-212ENST00000556742 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
IFT43-212ENST00000556742 NWD2Q9ULI1 1742 aa15.24■□□□□ 0.03
IFT43-212ENST00000556742 POTEAQ6S8J7 498 aa15.23■□□□□ 0.03
IFT43-212ENST00000556742 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
IFT43-212ENST00000556742 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
IFT43-212ENST00000556742 AFF2P51816 1311 aa15.22■□□□□ 0.03
IFT43-212ENST00000556742 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
IFT43-212ENST00000556742 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
IFT43-212ENST00000556742 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
IFT43-212ENST00000556742 BRD4O60885 1362 aaPredicted RBP15.22■□□□□ 0.03
IFT43-212ENST00000556742 ACEP12821 1306 aa15.21■□□□□ 0.03
IFT43-212ENST00000556742 MON2Q7Z3U7 1717 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms