RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 ATP6V1AP38606 617 aa8.6□□□□□ -1.03
RDH11-208ENST00000556692 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
RDH11-208ENST00000556692 ERBB4Q15303 1308 aa8.59□□□□□ -1.03
RDH11-208ENST00000556692 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
RDH11-208ENST00000556692 OATP04181 439 aa8.58□□□□□ -1.04
RDH11-208ENST00000556692 PXYLP1Q8TE99 480 aa8.58□□□□□ -1.04
RDH11-208ENST00000556692 BMP1P13497 986 aa8.57□□□□□ -1.04
RDH11-208ENST00000556692 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
RDH11-208ENST00000556692 KCNMA1Q12791 1236 aa8.56□□□□□ -1.04
RDH11-208ENST00000556692 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
RDH11-208ENST00000556692 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
RDH11-208ENST00000556692 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
RDH11-208ENST00000556692 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
RDH11-208ENST00000556692 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
RDH11-208ENST00000556692 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
RDH11-208ENST00000556692 SPRYD3Q8NCJ5 442 aa8.54□□□□□ -1.04
RDH11-208ENST00000556692 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
RDH11-208ENST00000556692 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
RDH11-208ENST00000556692 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
RDH11-208ENST00000556692 CAPN5O15484 640 aaPredicted RBP8.52□□□□□ -1.05
RDH11-208ENST00000556692 FCHSD2O94868 740 aa8.52□□□□□ -1.05
RDH11-208ENST00000556692 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
RDH11-208ENST00000556692 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
RDH11-208ENST00000556692 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
RDH11-208ENST00000556692 GDF11O95390 407 aa8.49□□□□□ -1.05
RDH11-208ENST00000556692 GCGRP47871 477 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 MMP16P51512 607 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 WNT7BP56706 349 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 SKOR1P84550 965 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 WASF2Q9Y6W5 498 aa8.48□□□□□ -1.05
RDH11-208ENST00000556692 GSK3AP49840 483 aa8.47□□□□□ -1.05
RDH11-208ENST00000556692 RASSF7Q02833 373 aa8.46□□□□□ -1.06
RDH11-208ENST00000556692 Q3C1V9 767 aa8.46□□□□□ -1.06
RDH11-208ENST00000556692 ZFP42Q96MM3 310 aa8.46□□□□□ -1.06
RDH11-208ENST00000556692 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
RDH11-208ENST00000556692 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
RDH11-208ENST00000556692 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
RDH11-208ENST00000556692 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
RDH11-208ENST00000556692 DXOO77932 396 aaKnown RBP8.42□□□□□ -1.06
RDH11-208ENST00000556692 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
RDH11-208ENST00000556692 RNF225M0QZC1 329 aaPredicted RBP8.41□□□□□ -1.06
RDH11-208ENST00000556692 VSIG8P0DPA2 414 aa8.41□□□□□ -1.06
RDH11-208ENST00000556692 NLRP7Q8WX94 980 aa8.41□□□□□ -1.06
RDH11-208ENST00000556692 SCARF1Q14162 830 aa8.4□□□□□ -1.06
RDH11-208ENST00000556692 SIAH2O43255 324 aa8.39□□□□□ -1.07
RDH11-208ENST00000556692 HIC1Q14526 733 aa8.39□□□□□ -1.07
RDH11-208ENST00000556692 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
RDH11-208ENST00000556692 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
RDH11-208ENST00000556692 GPAT2Q6NUI2 795 aa8.37□□□□□ -1.07
RDH11-208ENST00000556692 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
RDH11-208ENST00000556692 PURBQ96QR8 312 aaKnown RBP8.37□□□□□ -1.07
RDH11-208ENST00000556692 XP32Q5T750 250 aa8.35□□□□□ -1.07
RDH11-208ENST00000556692 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
RDH11-208ENST00000556692 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
RDH11-208ENST00000556692 IGHA1P01876 353 aa8.32□□□□□ -1.08
RDH11-208ENST00000556692 MAN1A2O60476 641 aa8.31□□□□□ -1.08
RDH11-208ENST00000556692 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
RDH11-208ENST00000556692 GNPATO15228 680 aa8.3□□□□□ -1.08
RDH11-208ENST00000556692 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
RDH11-208ENST00000556692 JUNDP17535 347 aa8.29□□□□□ -1.08
RDH11-208ENST00000556692 NNTQ13423 1086 aa8.29□□□□□ -1.08
RDH11-208ENST00000556692 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
RDH11-208ENST00000556692 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
RDH11-208ENST00000556692 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 KDM4AO75164 1064 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 IRS1P35568 1242 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 SH3BP2P78314 561 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 CNTNAP3Q9BZ76 1288 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
RDH11-208ENST00000556692 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
RDH11-208ENST00000556692 RTN4Q9NQC3 1192 aaKnown RBP8.27□□□□□ -1.09
RDH11-208ENST00000556692 ADH1CP00326 375 aa8.26□□□□□ -1.09
RDH11-208ENST00000556692 AMER1Q5JTC6 1135 aaPredicted RBP8.26□□□□□ -1.09
RDH11-208ENST00000556692 HLA-CQ95604 372 aa8.26□□□□□ -1.09
RDH11-208ENST00000556692 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
RDH11-208ENST00000556692 TIMP2P16035 220 aa8.25□□□□□ -1.09
RDH11-208ENST00000556692 FOXK2Q01167 660 aa8.25□□□□□ -1.09
RDH11-208ENST00000556692 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
RDH11-208ENST00000556692 SVOPQ8N4V2 548 aa8.25□□□□□ -1.09
RDH11-208ENST00000556692 SEMA3EO15041 775 aa8.24□□□□□ -1.09
RDH11-208ENST00000556692 CD46P15529 392 aa8.23□□□□□ -1.09
RDH11-208ENST00000556692 KRT76Q01546 638 aa8.23□□□□□ -1.09
RDH11-208ENST00000556692 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
RDH11-208ENST00000556692 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
RDH11-208ENST00000556692 USP46P62068 366 aa8.22□□□□□ -1.09
RDH11-208ENST00000556692 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
RDH11-208ENST00000556692 SYMPKQ92797 1274 aaKnown RBP8.22□□□□□ -1.09
RDH11-208ENST00000556692 ZNF385CQ66K41 422 aaPredicted RBP8.21□□□□□ -1.1
RDH11-208ENST00000556692 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
RDH11-208ENST00000556692 GPR161Q8N6U8 529 aaKnown RBP8.21□□□□□ -1.1
RDH11-208ENST00000556692 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
RDH11-208ENST00000556692 BAP1Q92560 729 aa8.2□□□□□ -1.1
RDH11-208ENST00000556692 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
RDH11-208ENST00000556692 UPP2O95045 317 aa8.19□□□□□ -1.1
RDH11-208ENST00000556692 BMP2P12643 396 aa8.19□□□□□ -1.1
RDH11-208ENST00000556692 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
RDH11-208ENST00000556692 HOXA2O43364 376 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms