RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
XRCC3-216ENST00000556682 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
XRCC3-216ENST00000556682 RGS17Q9UGC6 210 aaPredicted RBP15.72■□□□□ 0.11
XRCC3-216ENST00000556682 NALCNQ8IZF0 1738 aa15.71■□□□□ 0.11
XRCC3-216ENST00000556682 IFT172Q9UG01 1749 aa15.71■□□□□ 0.11
XRCC3-216ENST00000556682 ESCO1Q5FWF5 840 aa15.71■□□□□ 0.11
XRCC3-216ENST00000556682 NUTM2BA6NNL0 878 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-216ENST00000556682 NUTM2EB1AL46 878 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-216ENST00000556682 NUTM2AQ8IVF1 878 aaPredicted RBP15.69■□□□□ 0.1
XRCC3-216ENST00000556682 DDX17Q92841 729 aaKnown RBP15.69■□□□□ 0.1
XRCC3-216ENST00000556682 POGKQ9P215 609 aa15.69■□□□□ 0.1
XRCC3-216ENST00000556682 PLEKHH1Q9ULM0 1364 aa15.68■□□□□ 0.1
XRCC3-216ENST00000556682 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
XRCC3-216ENST00000556682 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
XRCC3-216ENST00000556682 ZNF772Q68DY9 489 aaPredicted RBP15.67■□□□□ 0.1
XRCC3-216ENST00000556682 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
XRCC3-216ENST00000556682 LAMC1P11047 1609 aa15.66■□□□□ 0.1
XRCC3-216ENST00000556682 NUTM2FA1L443 756 aa15.66■□□□□ 0.1
XRCC3-216ENST00000556682 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
XRCC3-216ENST00000556682 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
XRCC3-216ENST00000556682 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
XRCC3-216ENST00000556682 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
XRCC3-216ENST00000556682 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
XRCC3-216ENST00000556682 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
XRCC3-216ENST00000556682 SHPRHQ149N8 1683 aa15.64■□□□□ 0.09
XRCC3-216ENST00000556682 FOXO3O43524 673 aa15.64■□□□□ 0.09
XRCC3-216ENST00000556682 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
XRCC3-216ENST00000556682 LRP6O75581 1613 aa15.63■□□□□ 0.09
XRCC3-216ENST00000556682 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
XRCC3-216ENST00000556682 C8orf37Q96NL8 207 aa15.6■□□□□ 0.09
XRCC3-216ENST00000556682 ADGRB1O14514 1584 aa15.59■□□□□ 0.09
XRCC3-216ENST00000556682 PSME1Q06323 249 aa15.59■□□□□ 0.09
XRCC3-216ENST00000556682 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
XRCC3-216ENST00000556682 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
XRCC3-216ENST00000556682 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
XRCC3-216ENST00000556682 NGLY1Q96IV0 654 aa15.58■□□□□ 0.08
XRCC3-216ENST00000556682 AFF2P51816 1311 aa15.58■□□□□ 0.08
XRCC3-216ENST00000556682 EIF3AQ14152 1382 aaKnown RBP15.58■□□□□ 0.08
XRCC3-216ENST00000556682 RXRBP28702 533 aa15.57■□□□□ 0.08
XRCC3-216ENST00000556682 KRT28Q7Z3Y7 464 aa15.57■□□□□ 0.08
XRCC3-216ENST00000556682 HIRIP3Q9BW71 556 aaPredicted RBP15.57■□□□□ 0.08
XRCC3-216ENST00000556682 MINK1Q8N4C8 1332 aaPredicted RBP15.56■□□□□ 0.08
XRCC3-216ENST00000556682 WASLO00401 505 aaPredicted RBP15.55■□□□□ 0.08
XRCC3-216ENST00000556682 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
XRCC3-216ENST00000556682 PXDNQ92626 1479 aa15.54■□□□□ 0.08
XRCC3-216ENST00000556682 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
XRCC3-216ENST00000556682 QTRT2Q9H974 415 aaKnown RBP15.54■□□□□ 0.08
XRCC3-216ENST00000556682 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
XRCC3-216ENST00000556682 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
XRCC3-216ENST00000556682 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
XRCC3-216ENST00000556682 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
XRCC3-216ENST00000556682 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
XRCC3-216ENST00000556682 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
XRCC3-216ENST00000556682 KIF1AQ12756 1690 aa15.51■□□□□ 0.07
XRCC3-216ENST00000556682 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
XRCC3-216ENST00000556682 NBPF1Q3BBV0 1214 aa15.51■□□□□ 0.07
XRCC3-216ENST00000556682 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
XRCC3-216ENST00000556682 USP21Q9UK80 565 aa15.51■□□□□ 0.07
XRCC3-216ENST00000556682 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
XRCC3-216ENST00000556682 RBM6P78332 1123 aaKnown RBP15.5■□□□□ 0.07
XRCC3-216ENST00000556682 FNBP4Q8N3X1 1017 aaPredicted RBP15.5■□□□□ 0.07
XRCC3-216ENST00000556682 SBNO1A3KN83 1393 aa15.49■□□□□ 0.07
XRCC3-216ENST00000556682 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
XRCC3-216ENST00000556682 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
XRCC3-216ENST00000556682 TRPC5Q9UL62 973 aaPredicted RBP15.49■□□□□ 0.07
XRCC3-216ENST00000556682 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
XRCC3-216ENST00000556682 CDK19Q9BWU1 502 aa15.48■□□□□ 0.07
XRCC3-216ENST00000556682 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
XRCC3-216ENST00000556682 PRR36Q9H6K5 1346 aa15.47■□□□□ 0.07
XRCC3-216ENST00000556682 COL22A1Q8NFW1 1626 aaPredicted RBP15.47■□□□□ 0.07
XRCC3-216ENST00000556682 NUDT16Q96DE0 195 aaKnown RBP15.47■□□□□ 0.07
XRCC3-216ENST00000556682 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
XRCC3-216ENST00000556682 KIAA1210Q9ULL0 1709 aa15.46■□□□□ 0.07
XRCC3-216ENST00000556682 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.06
XRCC3-216ENST00000556682 CENPJQ9HC77 1338 aaPredicted RBP15.45■□□□□ 0.06
XRCC3-216ENST00000556682 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
XRCC3-216ENST00000556682 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
XRCC3-216ENST00000556682 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
XRCC3-216ENST00000556682 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
XRCC3-216ENST00000556682 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
XRCC3-216ENST00000556682 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
XRCC3-216ENST00000556682 CABLES1Q8TDN4 633 aa15.42■□□□□ 0.06
XRCC3-216ENST00000556682 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
XRCC3-216ENST00000556682 USP32Q8NFA0 1604 aa15.42■□□□□ 0.06
XRCC3-216ENST00000556682 RGPD8O14715 1765 aaPredicted RBP15.41■□□□□ 0.06
XRCC3-216ENST00000556682 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 MSH5O43196 834 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 ATRNO75882 1429 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 ATP7BP35670 1465 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
XRCC3-216ENST00000556682 NBPF8Q3BBV2 869 aa15.39■□□□□ 0.05
XRCC3-216ENST00000556682 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
XRCC3-216ENST00000556682 ACEP12821 1306 aa15.39■□□□□ 0.05
XRCC3-216ENST00000556682 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
XRCC3-216ENST00000556682 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
XRCC3-216ENST00000556682 RGS12O14924 1447 aa15.37■□□□□ 0.05
XRCC3-216ENST00000556682 CABP2Q9NPB3 220 aa15.37■□□□□ 0.05
XRCC3-216ENST00000556682 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
XRCC3-216ENST00000556682 SLIT2O94813 1529 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms