RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 DCCP43146 1447 aa15.86■□□□□ 0.13
FOXN3-212ENST00000556541 LRRC7Q96NW7 1537 aa15.86■□□□□ 0.13
FOXN3-212ENST00000556541 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
FOXN3-212ENST00000556541 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
FOXN3-212ENST00000556541 PUS7Q96PZ0 661 aaKnown RBP15.85■□□□□ 0.13
FOXN3-212ENST00000556541 TESK2Q96S53 571 aa15.85■□□□□ 0.13
FOXN3-212ENST00000556541 STK26Q9P289 416 aa15.85■□□□□ 0.13
FOXN3-212ENST00000556541 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
FOXN3-212ENST00000556541 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
FOXN3-212ENST00000556541 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
FOXN3-212ENST00000556541 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
FOXN3-212ENST00000556541 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
FOXN3-212ENST00000556541 POGKQ9P215 609 aa15.83■□□□□ 0.12
FOXN3-212ENST00000556541 PLEKHH1Q9ULM0 1364 aa15.82■□□□□ 0.12
FOXN3-212ENST00000556541 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
FOXN3-212ENST00000556541 TULP4Q9NRJ4 1543 aa15.81■□□□□ 0.12
FOXN3-212ENST00000556541 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
FOXN3-212ENST00000556541 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
FOXN3-212ENST00000556541 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
FOXN3-212ENST00000556541 WAPLQ7Z5K2 1190 aa15.79■□□□□ 0.12
FOXN3-212ENST00000556541 ITSN1Q15811 1721 aa15.79■□□□□ 0.12
FOXN3-212ENST00000556541 ANKARQ7Z5J8 1434 aa15.78■□□□□ 0.12
FOXN3-212ENST00000556541 EVC2Q86UK5 1308 aa15.78■□□□□ 0.12
FOXN3-212ENST00000556541 TOPAZ1Q8N9V7 1692 aa15.77■□□□□ 0.12
FOXN3-212ENST00000556541 TMF1P82094 1093 aa15.77■□□□□ 0.12
FOXN3-212ENST00000556541 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.12
FOXN3-212ENST00000556541 MSH6P52701 1360 aa15.75■□□□□ 0.11
FOXN3-212ENST00000556541 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
FOXN3-212ENST00000556541 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
FOXN3-212ENST00000556541 USP32Q8NFA0 1604 aa15.75■□□□□ 0.11
FOXN3-212ENST00000556541 ATAD2Q6PL18 1390 aa15.75■□□□□ 0.11
FOXN3-212ENST00000556541 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
FOXN3-212ENST00000556541 ATP7BP35670 1465 aa15.73■□□□□ 0.11
FOXN3-212ENST00000556541 MYOM1P52179 1685 aa15.73■□□□□ 0.11
FOXN3-212ENST00000556541 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
FOXN3-212ENST00000556541 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
FOXN3-212ENST00000556541 CCDC7Q96M83 1385 aa15.71■□□□□ 0.11
FOXN3-212ENST00000556541 MST1RQ04912 1400 aa15.7■□□□□ 0.1
FOXN3-212ENST00000556541 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
FOXN3-212ENST00000556541 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
FOXN3-212ENST00000556541 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
FOXN3-212ENST00000556541 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
FOXN3-212ENST00000556541 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
FOXN3-212ENST00000556541 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 C1orf167Q5SNV9 1468 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 ATF3P18847 181 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 C14orf37Q86TY3 774 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
FOXN3-212ENST00000556541 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
FOXN3-212ENST00000556541 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
FOXN3-212ENST00000556541 PRR36Q9H6K5 1346 aa15.66■□□□□ 0.1
FOXN3-212ENST00000556541 PLEKHG3A1L390 1219 aa15.65■□□□□ 0.1
FOXN3-212ENST00000556541 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
FOXN3-212ENST00000556541 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
FOXN3-212ENST00000556541 MON2Q7Z3U7 1717 aa15.65■□□□□ 0.1
FOXN3-212ENST00000556541 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
FOXN3-212ENST00000556541 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
FOXN3-212ENST00000556541 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
FOXN3-212ENST00000556541 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
FOXN3-212ENST00000556541 RBM33Q96EV2 1170 aaKnown RBP15.63■□□□□ 0.09
FOXN3-212ENST00000556541 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
FOXN3-212ENST00000556541 NHSL1Q5SYE7 1610 aa15.62■□□□□ 0.09
FOXN3-212ENST00000556541 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
FOXN3-212ENST00000556541 CD163L1Q9NR16 1453 aa15.61■□□□□ 0.09
FOXN3-212ENST00000556541 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
FOXN3-212ENST00000556541 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
FOXN3-212ENST00000556541 AHDC1Q5TGY3 1603 aaPredicted RBP15.59■□□□□ 0.09
FOXN3-212ENST00000556541 TOM1O60784 492 aa15.59■□□□□ 0.09
FOXN3-212ENST00000556541 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
FOXN3-212ENST00000556541 ROBO1Q9Y6N7 1651 aa15.58■□□□□ 0.08
FOXN3-212ENST00000556541 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
FOXN3-212ENST00000556541 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
FOXN3-212ENST00000556541 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
FOXN3-212ENST00000556541 SSH2Q76I76 1423 aa15.57■□□□□ 0.08
FOXN3-212ENST00000556541 TRPM3Q9HCF6 1732 aaPredicted RBP15.57■□□□□ 0.08
FOXN3-212ENST00000556541 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
FOXN3-212ENST00000556541 A0A1W2PP64 1363 aa15.56■□□□□ 0.08
FOXN3-212ENST00000556541 USP6P35125 1406 aa15.56■□□□□ 0.08
FOXN3-212ENST00000556541 EDC4Q6P2E9 1401 aaKnown RBP15.56■□□□□ 0.08
FOXN3-212ENST00000556541 NPC1L1Q9UHC9 1359 aa15.55■□□□□ 0.08
FOXN3-212ENST00000556541 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
FOXN3-212ENST00000556541 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
FOXN3-212ENST00000556541 ACEP12821 1306 aa15.54■□□□□ 0.08
FOXN3-212ENST00000556541 NPHP3Q7Z494 1330 aa15.54■□□□□ 0.08
FOXN3-212ENST00000556541 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
FOXN3-212ENST00000556541 BRINP3Q76B58 766 aa15.54■□□□□ 0.08
FOXN3-212ENST00000556541 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
FOXN3-212ENST00000556541 PXDNQ92626 1479 aa15.53■□□□□ 0.08
FOXN3-212ENST00000556541 KIF20BQ96Q89 1820 aa15.53■□□□□ 0.08
FOXN3-212ENST00000556541 ORAI2Q96SN7 254 aa15.53■□□□□ 0.08
FOXN3-212ENST00000556541 ALS2Q96Q42 1657 aa15.53■□□□□ 0.08
FOXN3-212ENST00000556541 SBNO1A3KN83 1393 aa15.52■□□□□ 0.08
FOXN3-212ENST00000556541 TTC21AQ8NDW8 1320 aa15.52■□□□□ 0.08
FOXN3-212ENST00000556541 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
FOXN3-212ENST00000556541 NSD2O96028 1365 aa15.51■□□□□ 0.07
FOXN3-212ENST00000556541 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
FOXN3-212ENST00000556541 NUTM2FA1L443 756 aa15.51■□□□□ 0.07
FOXN3-212ENST00000556541 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
FOXN3-212ENST00000556541 NGDNQ8NEJ9 315 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms