RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 USP47Q96K76 1375 aa24.61■■□□□ 1.53
TUBB3-211ENST00000556536 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
TUBB3-211ENST00000556536 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
TUBB3-211ENST00000556536 SAFB2Q14151 953 aaKnown RBP eCLIP24.59■■□□□ 1.53
TUBB3-211ENST00000556536 POGKQ9P215 609 aa24.59■■□□□ 1.53
TUBB3-211ENST00000556536 CENPJQ9HC77 1338 aaPredicted RBP24.57■■□□□ 1.52
TUBB3-211ENST00000556536 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
TUBB3-211ENST00000556536 EIF3AQ14152 1382 aaKnown RBP24.56■■□□□ 1.52
TUBB3-211ENST00000556536 ARHGEF28Q8N1W1 1705 aaKnown RBP24.56■■□□□ 1.52
TUBB3-211ENST00000556536 ST20-MTHFSA0A0A6YYL1 179 aa24.56■■□□□ 1.52
TUBB3-211ENST00000556536 HSPA5P11021 654 aaKnown RBP24.56■■□□□ 1.52
TUBB3-211ENST00000556536 EIF4G2P78344 907 aaKnown RBP eCLIP24.55■■□□□ 1.52
TUBB3-211ENST00000556536 HIRIP3Q9BW71 556 aaPredicted RBP24.52■■□□□ 1.52
TUBB3-211ENST00000556536 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
TUBB3-211ENST00000556536 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
TUBB3-211ENST00000556536 TESK2Q96S53 571 aa24.49■■□□□ 1.51
TUBB3-211ENST00000556536 XIRP1Q702N8 1843 aaKnown RBP24.49■■□□□ 1.51
TUBB3-211ENST00000556536 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
TUBB3-211ENST00000556536 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
TUBB3-211ENST00000556536 NCOA3Q9Y6Q9 1424 aa24.47■■□□□ 1.51
TUBB3-211ENST00000556536 ADGRL3Q9HAR2 1447 aa24.46■■□□□ 1.51
TUBB3-211ENST00000556536 QRICH2Q9H0J4 1663 aa24.45■■□□□ 1.5
TUBB3-211ENST00000556536 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
TUBB3-211ENST00000556536 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
TUBB3-211ENST00000556536 NALCNQ8IZF0 1738 aa24.42■■□□□ 1.5
TUBB3-211ENST00000556536 MSH6P52701 1360 aa24.41■■□□□ 1.5
TUBB3-211ENST00000556536 WASLO00401 505 aaPredicted RBP24.4■■□□□ 1.5
TUBB3-211ENST00000556536 TULP4Q9NRJ4 1543 aa24.4■■□□□ 1.5
TUBB3-211ENST00000556536 ADGRB2O60241 1585 aa24.39■■□□□ 1.5
TUBB3-211ENST00000556536 CDK19Q9BWU1 502 aa24.39■■□□□ 1.49
TUBB3-211ENST00000556536 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
TUBB3-211ENST00000556536 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
TUBB3-211ENST00000556536 TMF1P82094 1093 aa24.36■■□□□ 1.49
TUBB3-211ENST00000556536 POTEAQ6S8J7 498 aa24.36■■□□□ 1.49
TUBB3-211ENST00000556536 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
TUBB3-211ENST00000556536 ROBO1Q9Y6N7 1651 aa24.36■■□□□ 1.49
TUBB3-211ENST00000556536 NUTM2FA1L443 756 aa24.35■■□□□ 1.49
TUBB3-211ENST00000556536 ATF3P18847 181 aa24.35■■□□□ 1.49
TUBB3-211ENST00000556536 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
TUBB3-211ENST00000556536 DCCP43146 1447 aa24.35■■□□□ 1.49
TUBB3-211ENST00000556536 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
TUBB3-211ENST00000556536 SRPK2P78362 688 aaKnown RBP24.33■■□□□ 1.49
TUBB3-211ENST00000556536 CADPS2Q86UW7 1296 aa24.33■■□□□ 1.49
TUBB3-211ENST00000556536 PRR36Q9H6K5 1346 aa24.32■■□□□ 1.48
TUBB3-211ENST00000556536 MST1RQ04912 1400 aa24.29■■□□□ 1.48
TUBB3-211ENST00000556536 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
TUBB3-211ENST00000556536 FMN2Q9NZ56 1722 aa24.28■■□□□ 1.48
TUBB3-211ENST00000556536 ATP7BP35670 1465 aa24.26■■□□□ 1.47
TUBB3-211ENST00000556536 C1orf167Q5SNV9 1468 aa24.26■■□□□ 1.47
TUBB3-211ENST00000556536 PUS7Q96PZ0 661 aaKnown RBP24.26■■□□□ 1.47
TUBB3-211ENST00000556536 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
TUBB3-211ENST00000556536 KIF7Q2M1P5 1343 aa24.26■■□□□ 1.47
TUBB3-211ENST00000556536 ANKARQ7Z5J8 1434 aa24.26■■□□□ 1.47
TUBB3-211ENST00000556536 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
TUBB3-211ENST00000556536 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
TUBB3-211ENST00000556536 USP32Q8NFA0 1604 aa24.24■■□□□ 1.47
TUBB3-211ENST00000556536 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
TUBB3-211ENST00000556536 ORAI2Q96SN7 254 aa24.23■■□□□ 1.47
TUBB3-211ENST00000556536 ATAD2Q6PL18 1390 aa24.22■■□□□ 1.47
TUBB3-211ENST00000556536 CCDC7Q96M83 1385 aa24.22■■□□□ 1.47
TUBB3-211ENST00000556536 CCDC61Q9Y6R9 512 aa24.22■■□□□ 1.47
TUBB3-211ENST00000556536 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
TUBB3-211ENST00000556536 JCADQ9P266 1359 aa24.21■■□□□ 1.47
TUBB3-211ENST00000556536 ESCO1Q5FWF5 840 aa24.21■■□□□ 1.47
TUBB3-211ENST00000556536 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
TUBB3-211ENST00000556536 CABP1Q9NZU7 370 aa24.2■■□□□ 1.46
TUBB3-211ENST00000556536 PPIP5K1Q6PFW1 1433 aa24.18■■□□□ 1.46
TUBB3-211ENST00000556536 BRINP3Q76B58 766 aa24.18■■□□□ 1.46
TUBB3-211ENST00000556536 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
TUBB3-211ENST00000556536 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
TUBB3-211ENST00000556536 SLC12A5Q9H2X9 1139 aa24.18■■□□□ 1.46
TUBB3-211ENST00000556536 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
TUBB3-211ENST00000556536 PLEKHG3A1L390 1219 aa24.16■■□□□ 1.46
TUBB3-211ENST00000556536 TOPAZ1Q8N9V7 1692 aa24.15■■□□□ 1.46
TUBB3-211ENST00000556536 RGPD8O14715 1765 aaPredicted RBP24.14■■□□□ 1.45
TUBB3-211ENST00000556536 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
TUBB3-211ENST00000556536 ACEP12821 1306 aa24.11■■□□□ 1.45
TUBB3-211ENST00000556536 NGDNQ8NEJ9 315 aaKnown RBP24.11■■□□□ 1.45
TUBB3-211ENST00000556536 DDX17Q92841 729 aaKnown RBP24.11■■□□□ 1.45
TUBB3-211ENST00000556536 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
TUBB3-211ENST00000556536 SPATA31A6Q5VVP1 1343 aa24.1■■□□□ 1.45
TUBB3-211ENST00000556536 FOXO3O43524 673 aa24.1■■□□□ 1.45
TUBB3-211ENST00000556536 CD163L1Q9NR16 1453 aa24.1■■□□□ 1.45
TUBB3-211ENST00000556536 MYOM1P52179 1685 aa24.09■■□□□ 1.45
TUBB3-211ENST00000556536 POLR3AO14802 1390 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-211ENST00000556536 ITSN1Q15811 1721 aa24.08■■□□□ 1.45
TUBB3-211ENST00000556536 ZNF772Q68DY9 489 aaPredicted RBP24.07■■□□□ 1.44
TUBB3-211ENST00000556536 CPSF1Q10570 1443 aaKnown RBP24.07■■□□□ 1.44
TUBB3-211ENST00000556536 LRP6O75581 1613 aa24.06■■□□□ 1.44
TUBB3-211ENST00000556536 A0A1W2PP64 1363 aa24.06■■□□□ 1.44
TUBB3-211ENST00000556536 XPCQ01831 940 aaPredicted RBP24.06■■□□□ 1.44
TUBB3-211ENST00000556536 TERF2IPQ9NYB0 399 aa24.06■■□□□ 1.44
TUBB3-211ENST00000556536 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
TUBB3-211ENST00000556536 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
TUBB3-211ENST00000556536 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
TUBB3-211ENST00000556536 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
TUBB3-211ENST00000556536 PANK3Q9H999 370 aa24.05■■□□□ 1.44
TUBB3-211ENST00000556536 PSME1Q06323 249 aa24.04■■□□□ 1.44
TUBB3-211ENST00000556536 AHDC1Q5TGY3 1603 aaPredicted RBP24.03■■□□□ 1.44
TUBB3-211ENST00000556536 KRT28Q7Z3Y7 464 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms