RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
ACTN1-218ENST00000556343 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
ACTN1-218ENST00000556343 WASLO00401 505 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-218ENST00000556343 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
ACTN1-218ENST00000556343 CPS1P31327 1500 aa12.69□□□□□ -0.38
ACTN1-218ENST00000556343 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
ACTN1-218ENST00000556343 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
ACTN1-218ENST00000556343 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
ACTN1-218ENST00000556343 TMC1Q8TDI8 760 aa12.68□□□□□ -0.38
ACTN1-218ENST00000556343 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
ACTN1-218ENST00000556343 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
ACTN1-218ENST00000556343 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
ACTN1-218ENST00000556343 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
ACTN1-218ENST00000556343 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
ACTN1-218ENST00000556343 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
ACTN1-218ENST00000556343 C19orf44Q9H6X5 657 aa12.65□□□□□ -0.38
ACTN1-218ENST00000556343 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
ACTN1-218ENST00000556343 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
ACTN1-218ENST00000556343 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
ACTN1-218ENST00000556343 ATF3P18847 181 aa12.64□□□□□ -0.39
ACTN1-218ENST00000556343 HDGFL2Q7Z4V5 671 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-218ENST00000556343 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
ACTN1-218ENST00000556343 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
ACTN1-218ENST00000556343 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
ACTN1-218ENST00000556343 XRN1Q8IZH2 1706 aaKnown RBP12.63□□□□□ -0.39
ACTN1-218ENST00000556343 ANP32CO43423 234 aa12.63□□□□□ -0.39
ACTN1-218ENST00000556343 PANK3Q9H999 370 aa12.63□□□□□ -0.39
ACTN1-218ENST00000556343 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
ACTN1-218ENST00000556343 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
ACTN1-218ENST00000556343 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-218ENST00000556343 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
ACTN1-218ENST00000556343 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
ACTN1-218ENST00000556343 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-218ENST00000556343 SLC12A5Q9H2X9 1139 aa12.61□□□□□ -0.39
ACTN1-218ENST00000556343 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
ACTN1-218ENST00000556343 MSH6P52701 1360 aa12.6□□□□□ -0.39
ACTN1-218ENST00000556343 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
ACTN1-218ENST00000556343 CABP1Q9NZU7 370 aa12.6□□□□□ -0.39
ACTN1-218ENST00000556343 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
ACTN1-218ENST00000556343 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
ACTN1-218ENST00000556343 ADGRB2O60241 1585 aa12.58□□□□□ -0.4
ACTN1-218ENST00000556343 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
ACTN1-218ENST00000556343 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
ACTN1-218ENST00000556343 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
ACTN1-218ENST00000556343 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
ACTN1-218ENST00000556343 DCCP43146 1447 aa12.56□□□□□ -0.4
ACTN1-218ENST00000556343 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
ACTN1-218ENST00000556343 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-218ENST00000556343 RALBP1Q15311 655 aa12.55□□□□□ -0.4
ACTN1-218ENST00000556343 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
ACTN1-218ENST00000556343 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
ACTN1-218ENST00000556343 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
ACTN1-218ENST00000556343 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-218ENST00000556343 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
ACTN1-218ENST00000556343 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
ACTN1-218ENST00000556343 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
ACTN1-218ENST00000556343 ATP7BP35670 1465 aa12.53□□□□□ -0.4
ACTN1-218ENST00000556343 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
ACTN1-218ENST00000556343 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
ACTN1-218ENST00000556343 ACEP12821 1306 aa12.53□□□□□ -0.4
ACTN1-218ENST00000556343 PSME1Q06323 249 aa12.52□□□□□ -0.41
ACTN1-218ENST00000556343 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
ACTN1-218ENST00000556343 CARD14Q9BXL6 1004 aa12.51□□□□□ -0.41
ACTN1-218ENST00000556343 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
ACTN1-218ENST00000556343 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
ACTN1-218ENST00000556343 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-218ENST00000556343 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
ACTN1-218ENST00000556343 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
ACTN1-218ENST00000556343 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-218ENST00000556343 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
ACTN1-218ENST00000556343 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
ACTN1-218ENST00000556343 NSD2O96028 1365 aa12.49□□□□□ -0.41
ACTN1-218ENST00000556343 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
ACTN1-218ENST00000556343 TOM1O60784 492 aa12.49□□□□□ -0.41
ACTN1-218ENST00000556343 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-218ENST00000556343 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-218ENST00000556343 MIER1Q8N108 512 aa12.49□□□□□ -0.41
ACTN1-218ENST00000556343 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
ACTN1-218ENST00000556343 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-218ENST00000556343 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
ACTN1-218ENST00000556343 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
ACTN1-218ENST00000556343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
ACTN1-218ENST00000556343 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
ACTN1-218ENST00000556343 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
ACTN1-218ENST00000556343 MST1RQ04912 1400 aa12.47□□□□□ -0.41
ACTN1-218ENST00000556343 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
ACTN1-218ENST00000556343 COG3Q96JB2 828 aa12.47□□□□□ -0.41
ACTN1-218ENST00000556343 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
ACTN1-218ENST00000556343 FMN2Q9NZ56 1722 aa12.47□□□□□ -0.41
ACTN1-218ENST00000556343 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.41
ACTN1-218ENST00000556343 FOXO3O43524 673 aa12.46□□□□□ -0.41
ACTN1-218ENST00000556343 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-218ENST00000556343 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
ACTN1-218ENST00000556343 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.42
ACTN1-218ENST00000556343 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
ACTN1-218ENST00000556343 MYBBP1AQ9BQG0 1328 aaKnown RBP12.45□□□□□ -0.42
ACTN1-218ENST00000556343 FYB1O15117 783 aa12.45□□□□□ -0.42
ACTN1-218ENST00000556343 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
ACTN1-218ENST00000556343 USP6P35125 1406 aa12.45□□□□□ -0.42
ACTN1-218ENST00000556343 NLRP13Q86W25 1043 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms