RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
SUPT16H-206ENST00000556309 SLC10A3P09131 477 aa8.37□□□□□ -1.07
SUPT16H-206ENST00000556309 PLA2G2CQ5R387 149 aa8.37□□□□□ -1.07
SUPT16H-206ENST00000556309 METTL3Q86U44 580 aaKnown RBP8.36□□□□□ -1.07
SUPT16H-206ENST00000556309 PXYLP1Q8TE99 480 aa8.36□□□□□ -1.07
SUPT16H-206ENST00000556309 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
SUPT16H-206ENST00000556309 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
SUPT16H-206ENST00000556309 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
SUPT16H-206ENST00000556309 AK7Q96M32 723 aa8.34□□□□□ -1.07
SUPT16H-206ENST00000556309 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
SUPT16H-206ENST00000556309 TTC24A2A3L6 582 aaPredicted RBP8.33□□□□□ -1.08
SUPT16H-206ENST00000556309 TRIM66O15016 1216 aa8.33□□□□□ -1.08
SUPT16H-206ENST00000556309 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-206ENST00000556309 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
SUPT16H-206ENST00000556309 GRIPAP1Q4V328 841 aa8.32□□□□□ -1.08
SUPT16H-206ENST00000556309 FCF1Q9Y324 198 aaKnown RBP8.32□□□□□ -1.08
SUPT16H-206ENST00000556309 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-206ENST00000556309 MORN1Q5T089 497 aa8.31□□□□□ -1.08
SUPT16H-206ENST00000556309 SULF1Q8IWU6 871 aa8.31□□□□□ -1.08
SUPT16H-206ENST00000556309 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-206ENST00000556309 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-206ENST00000556309 WNT7AO00755 349 aa8.3□□□□□ -1.08
SUPT16H-206ENST00000556309 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
SUPT16H-206ENST00000556309 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
SUPT16H-206ENST00000556309 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
SUPT16H-206ENST00000556309 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
SUPT16H-206ENST00000556309 TERTO14746 1132 aaKnown RBP8.28□□□□□ -1.08
SUPT16H-206ENST00000556309 PDE4DQ08499 809 aa8.28□□□□□ -1.08
SUPT16H-206ENST00000556309 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
SUPT16H-206ENST00000556309 TTLL12Q14166 644 aaPredicted RBP8.27□□□□□ -1.09
SUPT16H-206ENST00000556309 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
SUPT16H-206ENST00000556309 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
SUPT16H-206ENST00000556309 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
SUPT16H-206ENST00000556309 AMHR2Q16671 573 aa8.26□□□□□ -1.09
SUPT16H-206ENST00000556309 Q3C1V9 767 aa8.26□□□□□ -1.09
SUPT16H-206ENST00000556309 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
SUPT16H-206ENST00000556309 RDH13Q8NBN7 331 aa8.26□□□□□ -1.09
SUPT16H-206ENST00000556309 PARP9Q8IXQ6 854 aa8.25□□□□□ -1.09
SUPT16H-206ENST00000556309 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
SUPT16H-206ENST00000556309 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
SUPT16H-206ENST00000556309 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 GCGRP47871 477 aa8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 FUT2Q10981 343 aa8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
SUPT16H-206ENST00000556309 SMPD1P17405 629 aa8.22□□□□□ -1.09
SUPT16H-206ENST00000556309 CLCN1P35523 988 aa8.22□□□□□ -1.09
SUPT16H-206ENST00000556309 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
SUPT16H-206ENST00000556309 SLC27A5Q9Y2P5 690 aa8.22□□□□□ -1.09
SUPT16H-206ENST00000556309 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
SUPT16H-206ENST00000556309 TRIM32Q13049 653 aa8.21□□□□□ -1.1
SUPT16H-206ENST00000556309 SSTR3P32745 418 aaPredicted RBP8.2□□□□□ -1.1
SUPT16H-206ENST00000556309 MMP16P51512 607 aa8.2□□□□□ -1.1
SUPT16H-206ENST00000556309 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
SUPT16H-206ENST00000556309 MS4A1P11836 297 aa8.19□□□□□ -1.1
SUPT16H-206ENST00000556309 WNT7BP56706 349 aa8.19□□□□□ -1.1
SUPT16H-206ENST00000556309 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
SUPT16H-206ENST00000556309 IRF7Q92985 503 aa8.18□□□□□ -1.1
SUPT16H-206ENST00000556309 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
SUPT16H-206ENST00000556309 MRGPRX2Q96LB1 330 aa8.17□□□□□ -1.1
SUPT16H-206ENST00000556309 CD46P15529 392 aa8.16□□□□□ -1.1
SUPT16H-206ENST00000556309 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
SUPT16H-206ENST00000556309 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
SUPT16H-206ENST00000556309 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
SUPT16H-206ENST00000556309 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
SUPT16H-206ENST00000556309 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
SUPT16H-206ENST00000556309 DXOO77932 396 aaKnown RBP8.13□□□□□ -1.11
SUPT16H-206ENST00000556309 USP46P62068 366 aa8.13□□□□□ -1.11
SUPT16H-206ENST00000556309 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
SUPT16H-206ENST00000556309 J3QL48 77 aa8.12□□□□□ -1.11
SUPT16H-206ENST00000556309 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
SUPT16H-206ENST00000556309 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
SUPT16H-206ENST00000556309 HPS1Q92902 700 aa8.11□□□□□ -1.11
SUPT16H-206ENST00000556309 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
SUPT16H-206ENST00000556309 NUTM1Q86Y26 1132 aa8.09□□□□□ -1.11
SUPT16H-206ENST00000556309 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
SUPT16H-206ENST00000556309 KDM4AO75164 1064 aa8.08□□□□□ -1.12
SUPT16H-206ENST00000556309 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
SUPT16H-206ENST00000556309 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
SUPT16H-206ENST00000556309 HLA-CQ95604 372 aa8.08□□□□□ -1.12
SUPT16H-206ENST00000556309 TBC1D2Q9BYX2 928 aa8.07□□□□□ -1.12
SUPT16H-206ENST00000556309 H3BM21 787 aa8.06□□□□□ -1.12
SUPT16H-206ENST00000556309 NDUFV2P19404 249 aa8.06□□□□□ -1.12
SUPT16H-206ENST00000556309 GUCA2AQ02747 115 aa8.06□□□□□ -1.12
SUPT16H-206ENST00000556309 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 ALDH1A1P00352 501 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 GMPRP36959 345 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 WASF2Q9Y6W5 498 aa8.05□□□□□ -1.12
SUPT16H-206ENST00000556309 MOXD2PA6NHM9 499 aa8.04□□□□□ -1.12
SUPT16H-206ENST00000556309 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
SUPT16H-206ENST00000556309 HOXA2O43364 376 aa8.04□□□□□ -1.12
SUPT16H-206ENST00000556309 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
SUPT16H-206ENST00000556309 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
SUPT16H-206ENST00000556309 JUNDP17535 347 aa8.02□□□□□ -1.13
SUPT16H-206ENST00000556309 SKOR1P84550 965 aa8.02□□□□□ -1.13
SUPT16H-206ENST00000556309 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
SUPT16H-206ENST00000556309 EHBP1Q8NDI1 1231 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms