RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 FNBP4Q8N3X1 1017 aaPredicted RBP9.78□□□□□ -0.84
PCNX1-211ENST00000556272 PARD3Q8TEW0 1356 aa9.78□□□□□ -0.84
PCNX1-211ENST00000556272 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
PCNX1-211ENST00000556272 PSMD1Q99460 953 aa9.78□□□□□ -0.84
PCNX1-211ENST00000556272 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
PCNX1-211ENST00000556272 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
PCNX1-211ENST00000556272 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
PCNX1-211ENST00000556272 AMOTL2Q9Y2J4 779 aa9.78□□□□□ -0.84
PCNX1-211ENST00000556272 A2MP01023 1474 aa9.77□□□□□ -0.84
PCNX1-211ENST00000556272 PLA2R1Q13018 1463 aa9.77□□□□□ -0.85
PCNX1-211ENST00000556272 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
PCNX1-211ENST00000556272 ABCC1P33527 1531 aa9.77□□□□□ -0.85
PCNX1-211ENST00000556272 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
PCNX1-211ENST00000556272 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 PRDM16Q9HAZ2 1276 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 DEPDC5O75140 1603 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 MYT1LQ9UL68 1186 aa9.76□□□□□ -0.85
PCNX1-211ENST00000556272 RTEL1-TNFRSF6BF6WH68 1400 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 PLCH2O75038 1416 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 CEP152O94986 1710 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 CC2D2BQ6DHV5 1058 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 PROSER2Q86WR7 435 aaPredicted RBP9.75□□□□□ -0.85
PCNX1-211ENST00000556272 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
PCNX1-211ENST00000556272 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 MCM6Q14566 821 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
PCNX1-211ENST00000556272 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 SPHKAPQ2M3C7 1700 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
PCNX1-211ENST00000556272 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
PCNX1-211ENST00000556272 ZNF526Q8TF50 670 aaPredicted RBP9.74□□□□□ -0.85
PCNX1-211ENST00000556272 TRPM2O94759 1503 aa9.74□□□□□ -0.85
PCNX1-211ENST00000556272 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
PCNX1-211ENST00000556272 MADDQ8WXG6 1647 aa9.73□□□□□ -0.85
PCNX1-211ENST00000556272 BLMP54132 1417 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-211ENST00000556272 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
PCNX1-211ENST00000556272 TET3O43151 1660 aa9.72□□□□□ -0.85
PCNX1-211ENST00000556272 SCAPERQ9BY12 1400 aa9.71□□□□□ -0.85
PCNX1-211ENST00000556272 SYNMO15061 1565 aa9.71□□□□□ -0.85
PCNX1-211ENST00000556272 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 ZFYVE16Q7Z3T8 1539 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 MSH5O43196 834 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 CLSTN1O94985 981 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
PCNX1-211ENST00000556272 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 PTPRTO14522 1441 aa9.7□□□□□ -0.86
PCNX1-211ENST00000556272 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-211ENST00000556272 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
PCNX1-211ENST00000556272 INO80Q9ULG1 1556 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-211ENST00000556272 EFCAB2Q5VUJ9 269 aa9.69□□□□□ -0.86
PCNX1-211ENST00000556272 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
PCNX1-211ENST00000556272 TESK2Q96S53 571 aa9.68□□□□□ -0.86
PCNX1-211ENST00000556272 TMF1P82094 1093 aa9.68□□□□□ -0.86
PCNX1-211ENST00000556272 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
PCNX1-211ENST00000556272 A0A0U1RQG5 324 aaPredicted RBP9.67□□□□□ -0.86
PCNX1-211ENST00000556272 CARNS1A5YM72 827 aa9.67□□□□□ -0.86
PCNX1-211ENST00000556272 FGD1P98174 961 aa9.67□□□□□ -0.86
PCNX1-211ENST00000556272 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
PCNX1-211ENST00000556272 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
PCNX1-211ENST00000556272 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
PCNX1-211ENST00000556272 KIAA1522Q9P206 1035 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-211ENST00000556272 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
PCNX1-211ENST00000556272 E2F4Q16254 413 aa9.66□□□□□ -0.86
PCNX1-211ENST00000556272 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
PCNX1-211ENST00000556272 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
PCNX1-211ENST00000556272 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
PCNX1-211ENST00000556272 MYOM2P54296 1465 aa9.65□□□□□ -0.86
PCNX1-211ENST00000556272 MYOM1P52179 1685 aa9.65□□□□□ -0.87
PCNX1-211ENST00000556272 ATP7AQ04656 1500 aa9.64□□□□□ -0.87
PCNX1-211ENST00000556272 IFT172Q9UG01 1749 aa9.64□□□□□ -0.87
PCNX1-211ENST00000556272 KDM5AP29375 1690 aaKnown RBP9.64□□□□□ -0.87
PCNX1-211ENST00000556272 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
PCNX1-211ENST00000556272 EIF3AQ14152 1382 aaKnown RBP9.64□□□□□ -0.87
PCNX1-211ENST00000556272 PIK3C2GO75747 1445 aa9.64□□□□□ -0.87
PCNX1-211ENST00000556272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-211ENST00000556272 RCAN3Q9UKA8 241 aa9.63□□□□□ -0.87
PCNX1-211ENST00000556272 TRAPPC8Q9Y2L5 1435 aa9.63□□□□□ -0.87
PCNX1-211ENST00000556272 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
PCNX1-211ENST00000556272 LMTK2Q8IWU2 1503 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 ASXL1Q8IXJ9 1541 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
PCNX1-211ENST00000556272 MAP3K4Q9Y6R4 1608 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 TCERG1O14776 1098 aaKnown RBP9.62□□□□□ -0.87
PCNX1-211ENST00000556272 KANK1Q14678 1352 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 FANCAO15360 1455 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 KIF1BO60333 1816 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 MS4A1P11836 297 aa9.62□□□□□ -0.87
PCNX1-211ENST00000556272 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 PKNOX2Q96KN3 472 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 MROH1Q8NDA8 1641 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms