RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 USP21Q9UK80 565 aa23.26■■□□□ 1.31
SUPT16H-205ENST00000556217 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
SUPT16H-205ENST00000556217 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
SUPT16H-205ENST00000556217 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
SUPT16H-205ENST00000556217 FNBP4Q8N3X1 1017 aaPredicted RBP23.2■■□□□ 1.3
SUPT16H-205ENST00000556217 EP400Q96L91 3159 aa23.19■■□□□ 1.3
SUPT16H-205ENST00000556217 COL22A1Q8NFW1 1626 aaPredicted RBP23.19■■□□□ 1.3
SUPT16H-205ENST00000556217 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
SUPT16H-205ENST00000556217 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
SUPT16H-205ENST00000556217 ATRNO75882 1429 aa23.16■■□□□ 1.3
SUPT16H-205ENST00000556217 ESCO1Q5FWF5 840 aa23.15■■□□□ 1.3
SUPT16H-205ENST00000556217 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
SUPT16H-205ENST00000556217 LRPPRCP42704 1394 aaKnown RBP23.12■■□□□ 1.29
SUPT16H-205ENST00000556217 ANKRD30BQ9BXX2 1392 aa23.11■■□□□ 1.29
SUPT16H-205ENST00000556217 PXDNQ92626 1479 aa23.11■■□□□ 1.29
SUPT16H-205ENST00000556217 MARF1Q9Y4F3 1742 aaKnown RBP23.11■■□□□ 1.29
SUPT16H-205ENST00000556217 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
SUPT16H-205ENST00000556217 TECPR2O15040 1411 aa23.1■■□□□ 1.29
SUPT16H-205ENST00000556217 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
SUPT16H-205ENST00000556217 MYOM2P54296 1465 aa23.1■■□□□ 1.29
SUPT16H-205ENST00000556217 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
SUPT16H-205ENST00000556217 STK26Q9P289 416 aa23.09■■□□□ 1.29
SUPT16H-205ENST00000556217 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
SUPT16H-205ENST00000556217 FOXO3O43524 673 aa23.08■■□□□ 1.29
SUPT16H-205ENST00000556217 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.28
SUPT16H-205ENST00000556217 WAPLQ7Z5K2 1190 aa23.06■■□□□ 1.28
SUPT16H-205ENST00000556217 GJD4Q96KN9 370 aaPredicted RBP23.06■■□□□ 1.28
SUPT16H-205ENST00000556217 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
SUPT16H-205ENST00000556217 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
SUPT16H-205ENST00000556217 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
SUPT16H-205ENST00000556217 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
SUPT16H-205ENST00000556217 FMN2Q9NZ56 1722 aa23.03■■□□□ 1.28
SUPT16H-205ENST00000556217 NUTM2FA1L443 756 aa23.03■■□□□ 1.28
SUPT16H-205ENST00000556217 MPHOSPH9Q99550 1183 aa23.03■■□□□ 1.28
SUPT16H-205ENST00000556217 PIK3C2GO75747 1445 aa23.02■■□□□ 1.28
SUPT16H-205ENST00000556217 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
SUPT16H-205ENST00000556217 TMEM132EQ6IEE7 984 aa23.01■■□□□ 1.27
SUPT16H-205ENST00000556217 TNKS1BP1Q9C0C2 1729 aaKnown RBP23■■□□□ 1.27
SUPT16H-205ENST00000556217 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
SUPT16H-205ENST00000556217 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
SUPT16H-205ENST00000556217 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
SUPT16H-205ENST00000556217 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
SUPT16H-205ENST00000556217 SIRT1Q96EB6 747 aa22.97■■□□□ 1.27
SUPT16H-205ENST00000556217 SPATA31A3Q5VYP0 1347 aa22.97■■□□□ 1.27
SUPT16H-205ENST00000556217 DEFB132Q7Z7B7 95 aa22.96■■□□□ 1.27
SUPT16H-205ENST00000556217 UNC5CLQ8IV45 518 aa22.95■■□□□ 1.26
SUPT16H-205ENST00000556217 KRT28Q7Z3Y7 464 aa22.94■■□□□ 1.26
SUPT16H-205ENST00000556217 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
SUPT16H-205ENST00000556217 C14orf93Q9H972 538 aaKnown RBP22.93■■□□□ 1.26
SUPT16H-205ENST00000556217 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
SUPT16H-205ENST00000556217 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 HAP1P54257 671 aaPredicted RBP22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 PSME1Q06323 249 aa22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 LRP5O75197 1615 aa22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 SLIT2O94813 1529 aa22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
SUPT16H-205ENST00000556217 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
SUPT16H-205ENST00000556217 NRXN1Q9ULB1 1477 aa22.9■■□□□ 1.26
SUPT16H-205ENST00000556217 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
SUPT16H-205ENST00000556217 GLI3P10071 1580 aa22.89■■□□□ 1.25
SUPT16H-205ENST00000556217 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
SUPT16H-205ENST00000556217 NWD2Q9ULI1 1742 aa22.86■■□□□ 1.25
SUPT16H-205ENST00000556217 CFAP70Q5T0N1 1121 aa22.86■■□□□ 1.25
SUPT16H-205ENST00000556217 BRWD3Q6RI45 1802 aa22.86■■□□□ 1.25
SUPT16H-205ENST00000556217 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
SUPT16H-205ENST00000556217 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
SUPT16H-205ENST00000556217 ARHGEF10O15013 1369 aa22.85■■□□□ 1.25
SUPT16H-205ENST00000556217 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
SUPT16H-205ENST00000556217 DLC1Q96QB1 1528 aa22.83■■□□□ 1.25
SUPT16H-205ENST00000556217 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
SUPT16H-205ENST00000556217 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
SUPT16H-205ENST00000556217 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
SUPT16H-205ENST00000556217 POGKQ9P215 609 aa22.83■■□□□ 1.25
SUPT16H-205ENST00000556217 VPS72Q15906 364 aa22.82■■□□□ 1.24
SUPT16H-205ENST00000556217 KRT27Q7Z3Y8 459 aa22.82■■□□□ 1.24
SUPT16H-205ENST00000556217 CABLES1Q8TDN4 633 aa22.82■■□□□ 1.24
SUPT16H-205ENST00000556217 ANKARQ7Z5J8 1434 aa22.82■■□□□ 1.24
SUPT16H-205ENST00000556217 PSDA5PKW4 1024 aaPredicted RBP22.81■■□□□ 1.24
SUPT16H-205ENST00000556217 HRCP23327 699 aa22.81■■□□□ 1.24
SUPT16H-205ENST00000556217 BAG6P46379 1132 aa22.81■■□□□ 1.24
SUPT16H-205ENST00000556217 ONECUT3O60422 494 aaPredicted RBP22.8■■□□□ 1.24
SUPT16H-205ENST00000556217 PLEKHG5O94827 1062 aa22.8■■□□□ 1.24
SUPT16H-205ENST00000556217 CCDC9Q9Y3X0 531 aaKnown RBP22.8■■□□□ 1.24
SUPT16H-205ENST00000556217 ADGRB2O60241 1585 aa22.8■■□□□ 1.24
SUPT16H-205ENST00000556217 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
SUPT16H-205ENST00000556217 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
SUPT16H-205ENST00000556217 GPRASP1Q5JY77 1395 aa22.75■■□□□ 1.23
SUPT16H-205ENST00000556217 ADGRB1O14514 1584 aa22.74■■□□□ 1.23
SUPT16H-205ENST00000556217 TRPM3Q9HCF6 1732 aaPredicted RBP22.74■■□□□ 1.23
SUPT16H-205ENST00000556217 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
SUPT16H-205ENST00000556217 RAB3GAP2Q9H2M9 1393 aa22.73■■□□□ 1.23
SUPT16H-205ENST00000556217 TRAK1Q9UPV9 953 aa22.72■■□□□ 1.23
SUPT16H-205ENST00000556217 A0A0G2JS52 829 aa22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 MYT1Q01538 1121 aa22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 NRAPQ86VF7 1730 aa22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
SUPT16H-205ENST00000556217 TULP4Q9NRJ4 1543 aa22.7■■□□□ 1.22
SUPT16H-205ENST00000556217 MINK1Q8N4C8 1332 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms