RNA–Protein interactions for RNA: ENST00000556125.5

SLC39A9-208, Transcript of solute carrier family 39 member 9, human

TSL 3

Gene SLC39A9, Length 944 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC39A9-208	ENST00000556125	NUTM2A	Q8IVF1	878 aa	Predicted RBP	29.45	■■■□□ 2.31
SLC39A9-208	ENST00000556125	TMEM132E	Q6IEE7	984 aa		29.44	■■■□□ 2.3
SLC39A9-208	ENST00000556125	NRXN1	Q9ULB1	1477 aa		29.43	■■■□□ 2.3
SLC39A9-208	ENST00000556125	PNPLA6	Q8IY17	1366 aa		29.43	■■■□□ 2.3
SLC39A9-208	ENST00000556125	KNDC1	Q76NI1	1749 aa		29.42	■■■□□ 2.3
SLC39A9-208	ENST00000556125	MYOM2	P54296	1465 aa		29.42	■■■□□ 2.3
SLC39A9-208	ENST00000556125	WAPL	Q7Z5K2	1190 aa		29.41	■■■□□ 2.3
SLC39A9-208	ENST00000556125	C14orf93	Q9H972	538 aa	Known RBP	29.41	■■■□□ 2.3
SLC39A9-208	ENST00000556125	SOS2	Q07890	1332 aa	Predicted RBP	29.41	■■■□□ 2.3
SLC39A9-208	ENST00000556125	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.4	■■■□□ 2.3
SLC39A9-208	ENST00000556125	HRC	P23327	699 aa		29.39	■■■□□ 2.3
SLC39A9-208	ENST00000556125	PLEKHH1	Q9ULM0	1364 aa		29.37	■■■□□ 2.29
SLC39A9-208	ENST00000556125	SIRT1	Q96EB6	747 aa		29.36	■■■□□ 2.29
SLC39A9-208	ENST00000556125	ESCO1	Q5FWF5	840 aa		29.35	■■■□□ 2.29
SLC39A9-208	ENST00000556125	CFAP70	Q5T0N1	1121 aa		29.35	■■■□□ 2.29
SLC39A9-208	ENST00000556125	DHX57	Q6P158	1386 aa	Known RBP	29.33	■■■□□ 2.29
SLC39A9-208	ENST00000556125	AFF2	P51816	1311 aa		29.32	■■■□□ 2.28
SLC39A9-208	ENST00000556125	NPHP3	Q7Z494	1330 aa		29.32	■■■□□ 2.28
SLC39A9-208	ENST00000556125	C8orf37	Q96NL8	207 aa		29.29	■■■□□ 2.28
SLC39A9-208	ENST00000556125	NUTM2F	A1L443	756 aa		29.27	■■■□□ 2.28
SLC39A9-208	ENST00000556125	RXRB	P28702	533 aa		29.27	■■■□□ 2.28
SLC39A9-208	ENST00000556125	FMN2	Q9NZ56	1722 aa		29.26	■■■□□ 2.27
SLC39A9-208	ENST00000556125	PXDN	Q92626	1479 aa		29.26	■■■□□ 2.27
SLC39A9-208	ENST00000556125	FOXO3	O43524	673 aa		29.26	■■■□□ 2.27
SLC39A9-208	ENST00000556125	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.24	■■■□□ 2.27
SLC39A9-208	ENST00000556125	ADAMTS2	O95450	1211 aa		29.24	■■■□□ 2.27
SLC39A9-208	ENST00000556125	STAC3	Q96MF2	364 aa		29.23	■■■□□ 2.27
SLC39A9-208	ENST00000556125	DLC1	Q96QB1	1528 aa		29.22	■■■□□ 2.27
SLC39A9-208	ENST00000556125	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.22	■■■□□ 2.27
SLC39A9-208	ENST00000556125	DCAF11	Q8TEB1	546 aa		29.21	■■■□□ 2.27
SLC39A9-208	ENST00000556125	NGLY1	Q96IV0	654 aa		29.21	■■■□□ 2.27
SLC39A9-208	ENST00000556125	PRAM1	Q96QH2	718 aa		29.21	■■■□□ 2.27
SLC39A9-208	ENST00000556125	ADGRB1	O14514	1584 aa		29.21	■■■□□ 2.27
SLC39A9-208	ENST00000556125	XPC	Q01831	940 aa	Predicted RBP	29.2	■■■□□ 2.26
SLC39A9-208	ENST00000556125	QTRT2	Q9H974	415 aa	Known RBP	29.19	■■■□□ 2.26
SLC39A9-208	ENST00000556125	KDM2A	Q9Y2K7	1162 aa		29.19	■■■□□ 2.26
SLC39A9-208	ENST00000556125	KIF1A	Q12756	1690 aa		29.18	■■■□□ 2.26
SLC39A9-208	ENST00000556125	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
SLC39A9-208	ENST00000556125	POGK	Q9P215	609 aa		29.16	■■■□□ 2.26
SLC39A9-208	ENST00000556125	RBM6	P78332	1123 aa	Known RBP	29.15	■■■□□ 2.26
SLC39A9-208	ENST00000556125	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.13	■■■□□ 2.25
SLC39A9-208	ENST00000556125	TRAK1	Q9UPV9	953 aa		29.13	■■■□□ 2.25
SLC39A9-208	ENST00000556125	PHF8	Q9UPP1	1060 aa		29.12	■■■□□ 2.25
SLC39A9-208	ENST00000556125	ADGRB2	O60241	1585 aa		29.11	■■■□□ 2.25
SLC39A9-208	ENST00000556125	KRT28	Q7Z3Y7	464 aa		29.11	■■■□□ 2.25
SLC39A9-208	ENST00000556125	USP21	Q9UK80	565 aa		29.11	■■■□□ 2.25
SLC39A9-208	ENST00000556125	SPATA31A3	Q5VYP0	1347 aa		29.11	■■■□□ 2.25
SLC39A9-208	ENST00000556125	RGPD8	O14715	1765 aa	Predicted RBP	29.11	■■■□□ 2.25
SLC39A9-208	ENST00000556125	ANKAR	Q7Z5J8	1434 aa		29.09	■■■□□ 2.25
SLC39A9-208	ENST00000556125	UPF1	Q92900	1129 aa	Known RBP eCLIP	29.08	■■■□□ 2.25
SLC39A9-208	ENST00000556125	RGS12	O14924	1447 aa		29.08	■■■□□ 2.25
SLC39A9-208	ENST00000556125	TRPC5	Q9UL62	973 aa	Predicted RBP	29.07	■■■□□ 2.24
SLC39A9-208	ENST00000556125	PSME1	Q06323	249 aa		29.06	■■■□□ 2.24
SLC39A9-208	ENST00000556125	MARF1	Q9Y4F3	1742 aa	Known RBP	29.05	■■■□□ 2.24
SLC39A9-208	ENST00000556125	USP32	Q8NFA0	1604 aa		29.04	■■■□□ 2.24
SLC39A9-208	ENST00000556125	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.03	■■■□□ 2.24
SLC39A9-208	ENST00000556125	ATRN	O75882	1429 aa		29.03	■■■□□ 2.24
SLC39A9-208	ENST00000556125	TNS3	Q68CZ2	1445 aa		29.03	■■■□□ 2.24
SLC39A9-208	ENST00000556125	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.02	■■■□□ 2.24
SLC39A9-208	ENST00000556125	SBNO1	A3KN83	1393 aa		29.01	■■■□□ 2.24
SLC39A9-208	ENST00000556125	EIF3A	Q14152	1382 aa	Known RBP	29.01	■■■□□ 2.24
SLC39A9-208	ENST00000556125	BCL9L	Q86UU0	1499 aa		29.01	■■■□□ 2.23
SLC39A9-208	ENST00000556125	PMFBP1	Q8TBY8	1022 aa		28.99	■■■□□ 2.23
SLC39A9-208	ENST00000556125	WASL	O00401	505 aa	Predicted RBP	28.98	■■■□□ 2.23
SLC39A9-208	ENST00000556125	TULP4	Q9NRJ4	1543 aa		28.98	■■■□□ 2.23
SLC39A9-208	ENST00000556125	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.96	■■■□□ 2.23
SLC39A9-208	ENST00000556125	ARHGEF10	O15013	1369 aa		28.96	■■■□□ 2.23
SLC39A9-208	ENST00000556125	PRR36	Q9H6K5	1346 aa		28.95	■■■□□ 2.23
SLC39A9-208	ENST00000556125	KIAA1210	Q9ULL0	1709 aa		28.94	■■■□□ 2.22
SLC39A9-208	ENST00000556125	SLIT2	O94813	1529 aa		28.94	■■■□□ 2.22
SLC39A9-208	ENST00000556125	HAP1	P54257	671 aa	Predicted RBP	28.92	■■■□□ 2.22
SLC39A9-208	ENST00000556125	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.91	■■■□□ 2.22
SLC39A9-208	ENST00000556125	LMOD2	Q6P5Q4	547 aa		28.91	■■■□□ 2.22
SLC39A9-208	ENST00000556125	CABLES1	Q8TDN4	633 aa		28.91	■■■□□ 2.22
SLC39A9-208	ENST00000556125	GPRASP1	Q5JY77	1395 aa		28.9	■■■□□ 2.22
SLC39A9-208	ENST00000556125	UNC5CL	Q8IV45	518 aa		28.9	■■■□□ 2.22
SLC39A9-208	ENST00000556125	GJD4	Q96KN9	370 aa	Predicted RBP	28.9	■■■□□ 2.22
SLC39A9-208	ENST00000556125	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.89	■■■□□ 2.21
SLC39A9-208	ENST00000556125	ATAD2	Q6PL18	1390 aa		28.87	■■■□□ 2.21
SLC39A9-208	ENST00000556125	ABCA3	Q99758	1704 aa		28.86	■■■□□ 2.21
SLC39A9-208	ENST00000556125	ATP7B	P35670	1465 aa		28.85	■■■□□ 2.21
SLC39A9-208	ENST00000556125	NBPF1	Q3BBV0	1214 aa		28.85	■■■□□ 2.21
SLC39A9-208	ENST00000556125	PLEKHG5	O94827	1062 aa		28.84	■■■□□ 2.21
SLC39A9-208	ENST00000556125	NGDN	Q8NEJ9	315 aa	Known RBP	28.84	■■■□□ 2.21
SLC39A9-208	ENST00000556125	NUDT16	Q96DE0	195 aa	Known RBP	28.84	■■■□□ 2.21
SLC39A9-208	ENST00000556125	ALS2	Q96Q42	1657 aa		28.83	■■■□□ 2.21
SLC39A9-208	ENST00000556125	ITSN1	Q15811	1721 aa		28.83	■■■□□ 2.21
SLC39A9-208	ENST00000556125	CDK19	Q9BWU1	502 aa		28.82	■■■□□ 2.2
SLC39A9-208	ENST00000556125	RALGAPB	Q86X10	1494 aa		28.82	■■■□□ 2.2
SLC39A9-208	ENST00000556125	GLI3	P10071	1580 aa		28.8	■■■□□ 2.2
SLC39A9-208	ENST00000556125	NWD2	Q9ULI1	1742 aa		28.8	■■■□□ 2.2
SLC39A9-208	ENST00000556125	PLCH1	Q4KWH8	1693 aa		28.79	■■■□□ 2.2
SLC39A9-208	ENST00000556125	FAM83G	A6ND36	823 aa		28.78	■■■□□ 2.2
SLC39A9-208	ENST00000556125	VPS72	Q15906	364 aa		28.78	■■■□□ 2.2
SLC39A9-208	ENST00000556125	L3MBTL2	Q969R5	705 aa		28.78	■■■□□ 2.2
SLC39A9-208	ENST00000556125	PAK3	O75914	559 aa	Predicted RBP	28.76	■■■□□ 2.19
SLC39A9-208	ENST00000556125	CCDC61	Q9Y6R9	512 aa		28.75	■■■□□ 2.19
SLC39A9-208	ENST00000556125	EP400	Q96L91	3159 aa		28.75	■■■□□ 2.19
SLC39A9-208	ENST00000556125	SIN3A	Q96ST3	1273 aa		28.74	■■■□□ 2.19
SLC39A9-208	ENST00000556125	POLR3A	O14802	1390 aa	Predicted RBP	28.74	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms