RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
CHGA-205ENST00000556098 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
CHGA-205ENST00000556098 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
CHGA-205ENST00000556098 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
CHGA-205ENST00000556098 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CHGA-205ENST00000556098 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
CHGA-205ENST00000556098 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
CHGA-205ENST00000556098 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
CHGA-205ENST00000556098 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
CHGA-205ENST00000556098 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
CHGA-205ENST00000556098 ATRNO75882 1429 aa16.28■□□□□ 0.2
CHGA-205ENST00000556098 IFT172Q9UG01 1749 aa16.28■□□□□ 0.2
CHGA-205ENST00000556098 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.2
CHGA-205ENST00000556098 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
CHGA-205ENST00000556098 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
CHGA-205ENST00000556098 PLCH1Q4KWH8 1693 aa16.26■□□□□ 0.19
CHGA-205ENST00000556098 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
CHGA-205ENST00000556098 FMN2Q9NZ56 1722 aa16.24■□□□□ 0.19
CHGA-205ENST00000556098 MYOM2P54296 1465 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 PXDNQ92626 1479 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 GLI3P10071 1580 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
CHGA-205ENST00000556098 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
CHGA-205ENST00000556098 STK26Q9P289 416 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 KIF1AQ12756 1690 aa16.23■□□□□ 0.19
CHGA-205ENST00000556098 EP400Q96L91 3159 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 FOXO3O43524 673 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
CHGA-205ENST00000556098 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 BCL9LQ86UU0 1499 aa16.22■□□□□ 0.19
CHGA-205ENST00000556098 NAIPQ13075 1403 aa16.2■□□□□ 0.18
CHGA-205ENST00000556098 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
CHGA-205ENST00000556098 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
CHGA-205ENST00000556098 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
CHGA-205ENST00000556098 RALGAPBQ86X10 1494 aa16.18■□□□□ 0.18
CHGA-205ENST00000556098 A0A0G2JS52 829 aa16.18■□□□□ 0.18
CHGA-205ENST00000556098 MYT1Q01538 1121 aa16.18■□□□□ 0.18
CHGA-205ENST00000556098 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
CHGA-205ENST00000556098 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
CHGA-205ENST00000556098 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
CHGA-205ENST00000556098 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
CHGA-205ENST00000556098 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
CHGA-205ENST00000556098 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
CHGA-205ENST00000556098 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
CHGA-205ENST00000556098 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
CHGA-205ENST00000556098 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
CHGA-205ENST00000556098 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
CHGA-205ENST00000556098 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
CHGA-205ENST00000556098 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
CHGA-205ENST00000556098 LRP5O75197 1615 aa16.14■□□□□ 0.17
CHGA-205ENST00000556098 RGPD1P0DJD0 1748 aa16.13■□□□□ 0.17
CHGA-205ENST00000556098 RPGRIP1LQ68CZ1 1315 aa16.13■□□□□ 0.17
CHGA-205ENST00000556098 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
CHGA-205ENST00000556098 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
CHGA-205ENST00000556098 TMEM132EQ6IEE7 984 aa16.12■□□□□ 0.17
CHGA-205ENST00000556098 CABLES1Q8TDN4 633 aa16.12■□□□□ 0.17
CHGA-205ENST00000556098 ADGRF5Q8IZF2 1346 aa16.12■□□□□ 0.17
CHGA-205ENST00000556098 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
CHGA-205ENST00000556098 SLIT2O94813 1529 aa16.11■□□□□ 0.17
CHGA-205ENST00000556098 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
CHGA-205ENST00000556098 SRCAPQ6ZRS2 3230 aa16.11■□□□□ 0.17
CHGA-205ENST00000556098 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
CHGA-205ENST00000556098 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
CHGA-205ENST00000556098 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
CHGA-205ENST00000556098 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
CHGA-205ENST00000556098 SAFB2Q14151 953 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHGA-205ENST00000556098 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
CHGA-205ENST00000556098 KRT27Q7Z3Y8 459 aa16.06■□□□□ 0.16
CHGA-205ENST00000556098 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
CHGA-205ENST00000556098 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
CHGA-205ENST00000556098 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
CHGA-205ENST00000556098 PSME1Q06323 249 aa16.04■□□□□ 0.16
CHGA-205ENST00000556098 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
CHGA-205ENST00000556098 TECPR2O15040 1411 aa16.03■□□□□ 0.16
CHGA-205ENST00000556098 TRPM3Q9HCF6 1732 aaPredicted RBP16.03■□□□□ 0.16
CHGA-205ENST00000556098 BAG6P46379 1132 aa16.03■□□□□ 0.16
CHGA-205ENST00000556098 VPS72Q15906 364 aa16.03■□□□□ 0.16
CHGA-205ENST00000556098 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
CHGA-205ENST00000556098 FAM182BQ5T319 152 aa16.02■□□□□ 0.16
CHGA-205ENST00000556098 PMFBP1Q8TBY8 1022 aa16.02■□□□□ 0.16
CHGA-205ENST00000556098 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
CHGA-205ENST00000556098 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
CHGA-205ENST00000556098 ALS2Q96Q42 1657 aa16■□□□□ 0.15
CHGA-205ENST00000556098 NRXN1Q9ULB1 1477 aa16■□□□□ 0.15
CHGA-205ENST00000556098 ADGRB2O60241 1585 aa16■□□□□ 0.15
CHGA-205ENST00000556098 ABCC11Q96J66 1382 aa16■□□□□ 0.15
CHGA-205ENST00000556098 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
CHGA-205ENST00000556098 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
CHGA-205ENST00000556098 ARHGEF10O15013 1369 aa15.99■□□□□ 0.15
CHGA-205ENST00000556098 ITSN1Q15811 1721 aa15.98■□□□□ 0.15
CHGA-205ENST00000556098 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
CHGA-205ENST00000556098 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
CHGA-205ENST00000556098 POGKQ9P215 609 aa15.98■□□□□ 0.15
CHGA-205ENST00000556098 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
CHGA-205ENST00000556098 FAM83GA6ND36 823 aa15.97■□□□□ 0.15
CHGA-205ENST00000556098 R3HDM1Q15032 1099 aaKnown RBP15.97■□□□□ 0.15
CHGA-205ENST00000556098 PRAM1Q96QH2 718 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms