RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PPP1R15BQ5SWA1 713 aa11.78□□□□□ -0.52
ATXN3-235ENST00000556082 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
ATXN3-235ENST00000556082 FANCAO15360 1455 aa11.77□□□□□ -0.52
ATXN3-235ENST00000556082 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
ATXN3-235ENST00000556082 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
ATXN3-235ENST00000556082 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
ATXN3-235ENST00000556082 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
ATXN3-235ENST00000556082 UNC13BO14795 1591 aa11.75□□□□□ -0.53
ATXN3-235ENST00000556082 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
ATXN3-235ENST00000556082 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
ATXN3-235ENST00000556082 AFAP1Q8N556 730 aa11.73□□□□□ -0.53
ATXN3-235ENST00000556082 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
ATXN3-235ENST00000556082 FAM135AQ9P2D6 1515 aa11.73□□□□□ -0.53
ATXN3-235ENST00000556082 ADGRL1O94910 1474 aa11.72□□□□□ -0.53
ATXN3-235ENST00000556082 CD109Q6YHK3 1445 aa11.72□□□□□ -0.53
ATXN3-235ENST00000556082 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
ATXN3-235ENST00000556082 ATP10AO60312 1499 aa11.71□□□□□ -0.53
ATXN3-235ENST00000556082 TK2O00142 265 aa11.71□□□□□ -0.53
ATXN3-235ENST00000556082 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.53
ATXN3-235ENST00000556082 ZFYVE16Q7Z3T8 1539 aa11.7□□□□□ -0.54
ATXN3-235ENST00000556082 MFSD10Q14728 455 aa11.7□□□□□ -0.54
ATXN3-235ENST00000556082 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
ATXN3-235ENST00000556082 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
ATXN3-235ENST00000556082 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
ATXN3-235ENST00000556082 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATXN3-235ENST00000556082 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
ATXN3-235ENST00000556082 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
ATXN3-235ENST00000556082 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
ATXN3-235ENST00000556082 NEO1Q92859 1461 aa11.69□□□□□ -0.54
ATXN3-235ENST00000556082 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
ATXN3-235ENST00000556082 CFAP74Q9C0B2 1584 aa11.68□□□□□ -0.54
ATXN3-235ENST00000556082 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-235ENST00000556082 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-235ENST00000556082 ATP7AQ04656 1500 aa11.68□□□□□ -0.54
ATXN3-235ENST00000556082 ZNF518AQ6AHZ1 1483 aa11.68□□□□□ -0.54
ATXN3-235ENST00000556082 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
ATXN3-235ENST00000556082 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
ATXN3-235ENST00000556082 MLH3Q9UHC1 1453 aa11.66□□□□□ -0.54
ATXN3-235ENST00000556082 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
ATXN3-235ENST00000556082 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATXN3-235ENST00000556082 GLI2P10070 1586 aa11.66□□□□□ -0.54
ATXN3-235ENST00000556082 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
ATXN3-235ENST00000556082 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
ATXN3-235ENST00000556082 SPATA31E1Q6ZUB1 1445 aa11.65□□□□□ -0.54
ATXN3-235ENST00000556082 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
ATXN3-235ENST00000556082 POGZQ7Z3K3 1410 aa11.64□□□□□ -0.55
ATXN3-235ENST00000556082 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
ATXN3-235ENST00000556082 KDM5CP41229 1560 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
ATXN3-235ENST00000556082 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 DEPDC5O75140 1603 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 KANK1Q14678 1352 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 EIF2AK4Q9P2K8 1649 aaKnown RBP11.63□□□□□ -0.55
ATXN3-235ENST00000556082 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
ATXN3-235ENST00000556082 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
ATXN3-235ENST00000556082 PTPRTO14522 1441 aa11.62□□□□□ -0.55
ATXN3-235ENST00000556082 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
ATXN3-235ENST00000556082 EVI5O60447 810 aa11.61□□□□□ -0.55
ATXN3-235ENST00000556082 FOSBP53539 338 aa11.61□□□□□ -0.55
ATXN3-235ENST00000556082 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-235ENST00000556082 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
ATXN3-235ENST00000556082 A2MP01023 1474 aa11.6□□□□□ -0.55
ATXN3-235ENST00000556082 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
ATXN3-235ENST00000556082 KIF3BO15066 747 aa11.6□□□□□ -0.55
ATXN3-235ENST00000556082 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
ATXN3-235ENST00000556082 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-235ENST00000556082 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
ATXN3-235ENST00000556082 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 HRO43593 1189 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 PSEN2P49810 448 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-235ENST00000556082 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
ATXN3-235ENST00000556082 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
ATXN3-235ENST00000556082 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
ATXN3-235ENST00000556082 TET3O43151 1660 aa11.57□□□□□ -0.56
ATXN3-235ENST00000556082 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
ATXN3-235ENST00000556082 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
ATXN3-235ENST00000556082 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 TRPM2O94759 1503 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 NEURL4Q96JN8 1562 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
ATXN3-235ENST00000556082 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
ATXN3-235ENST00000556082 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 USP47Q96K76 1375 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 ANP32CO43423 234 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 PTPREP23469 700 aa11.55□□□□□ -0.56
ATXN3-235ENST00000556082 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
ATXN3-235ENST00000556082 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-235ENST00000556082 FAM69CQ0P6D2 419 aa11.54□□□□□ -0.56
ATXN3-235ENST00000556082 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
ATXN3-235ENST00000556082 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
ATXN3-235ENST00000556082 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms