RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 ATP6V1AP38606 617 aa7.71□□□□□ -1.18
EFCAB11-210ENST00000556078 METTL3Q86U44 580 aaKnown RBP7.71□□□□□ -1.18
EFCAB11-210ENST00000556078 HPS1Q92902 700 aa7.71□□□□□ -1.18
EFCAB11-210ENST00000556078 BRICD5Q6PL45 260 aa7.7□□□□□ -1.18
EFCAB11-210ENST00000556078 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
EFCAB11-210ENST00000556078 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
EFCAB11-210ENST00000556078 FUT2Q10981 343 aa7.69□□□□□ -1.18
EFCAB11-210ENST00000556078 MSS51Q4VC12 460 aa7.69□□□□□ -1.18
EFCAB11-210ENST00000556078 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
EFCAB11-210ENST00000556078 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
EFCAB11-210ENST00000556078 ERBB4Q15303 1308 aa7.68□□□□□ -1.18
EFCAB11-210ENST00000556078 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
EFCAB11-210ENST00000556078 PRDM9Q9NQV7 894 aa7.67□□□□□ -1.18
EFCAB11-210ENST00000556078 KCNMA1Q12791 1236 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 TRIM32Q13049 653 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 HIC1Q14526 733 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 RDH13Q8NBN7 331 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 MRGPRX2Q96LB1 330 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 NISCHQ9Y2I1 1504 aa7.66□□□□□ -1.18
EFCAB11-210ENST00000556078 H3BM21 787 aa7.65□□□□□ -1.18
EFCAB11-210ENST00000556078 GCGRP47871 477 aa7.65□□□□□ -1.18
EFCAB11-210ENST00000556078 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
EFCAB11-210ENST00000556078 MMP16P51512 607 aa7.63□□□□□ -1.19
EFCAB11-210ENST00000556078 TMEM151AQ8N4L1 468 aa7.63□□□□□ -1.19
EFCAB11-210ENST00000556078 DDX11L8A8MPP1 907 aa7.62□□□□□ -1.19
EFCAB11-210ENST00000556078 FECHP22830 423 aa7.61□□□□□ -1.19
EFCAB11-210ENST00000556078 GSK3AP49840 483 aa7.61□□□□□ -1.19
EFCAB11-210ENST00000556078 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
EFCAB11-210ENST00000556078 SULF1Q8IWU6 871 aa7.61□□□□□ -1.19
EFCAB11-210ENST00000556078 GDF11O95390 407 aa7.6□□□□□ -1.19
EFCAB11-210ENST00000556078 BMP1P13497 986 aa7.6□□□□□ -1.19
EFCAB11-210ENST00000556078 Q3C1V9 767 aa7.6□□□□□ -1.19
EFCAB11-210ENST00000556078 GRIPAP1Q4V328 841 aa7.6□□□□□ -1.19
EFCAB11-210ENST00000556078 WNT7BP56706 349 aa7.58□□□□□ -1.2
EFCAB11-210ENST00000556078 GNPATO15228 680 aa7.57□□□□□ -1.2
EFCAB11-210ENST00000556078 DXOO77932 396 aaKnown RBP7.57□□□□□ -1.2
EFCAB11-210ENST00000556078 RASSF7Q02833 373 aa7.57□□□□□ -1.2
EFCAB11-210ENST00000556078 RC3H1Q5TC82 1133 aaKnown RBP7.57□□□□□ -1.2
EFCAB11-210ENST00000556078 TRIM46Q7Z4K8 759 aa7.57□□□□□ -1.2
EFCAB11-210ENST00000556078 XP32Q5T750 250 aa7.56□□□□□ -1.2
EFCAB11-210ENST00000556078 SEMA3EO15041 775 aa7.55□□□□□ -1.2
EFCAB11-210ENST00000556078 ALDH1A1P00352 501 aa7.55□□□□□ -1.2
EFCAB11-210ENST00000556078 SKOR1P84550 965 aa7.55□□□□□ -1.2
EFCAB11-210ENST00000556078 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
EFCAB11-210ENST00000556078 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-210ENST00000556078 P3H3Q8IVL6 736 aa7.53□□□□□ -1.2
EFCAB11-210ENST00000556078 NLRP7Q8WX94 980 aa7.53□□□□□ -1.2
EFCAB11-210ENST00000556078 GPR37O15354 613 aa7.52□□□□□ -1.21
EFCAB11-210ENST00000556078 GPAT2Q6NUI2 795 aa7.52□□□□□ -1.21
EFCAB11-210ENST00000556078 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
EFCAB11-210ENST00000556078 SIAH2O43255 324 aa7.5□□□□□ -1.21
EFCAB11-210ENST00000556078 RBM26Q5T8P6 1007 aaKnown RBP7.5□□□□□ -1.21
EFCAB11-210ENST00000556078 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
EFCAB11-210ENST00000556078 TSHZ2Q9NRE2 1034 aa7.5□□□□□ -1.21
EFCAB11-210ENST00000556078 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
EFCAB11-210ENST00000556078 CCDC24Q8N4L8 307 aa7.49□□□□□ -1.21
EFCAB11-210ENST00000556078 TESPA1A2RU30 521 aaPredicted RBP7.48□□□□□ -1.21
EFCAB11-210ENST00000556078 CD46P15529 392 aa7.48□□□□□ -1.21
EFCAB11-210ENST00000556078 KDM4AO75164 1064 aa7.47□□□□□ -1.21
EFCAB11-210ENST00000556078 VSIG8P0DPA2 414 aa7.47□□□□□ -1.21
EFCAB11-210ENST00000556078 USP46P62068 366 aa7.47□□□□□ -1.21
EFCAB11-210ENST00000556078 SMYD5Q6GMV2 418 aa7.47□□□□□ -1.21
EFCAB11-210ENST00000556078 WASF2Q9Y6W5 498 aa7.47□□□□□ -1.21
EFCAB11-210ENST00000556078 SOBPA7XYQ1 873 aa7.46□□□□□ -1.22
EFCAB11-210ENST00000556078 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
EFCAB11-210ENST00000556078 ADAMTS8Q9UP79 889 aa7.45□□□□□ -1.22
EFCAB11-210ENST00000556078 JUNDP17535 347 aa7.44□□□□□ -1.22
EFCAB11-210ENST00000556078 EHBP1Q8NDI1 1231 aa7.44□□□□□ -1.22
EFCAB11-210ENST00000556078 IGHA1P01876 353 aa7.43□□□□□ -1.22
EFCAB11-210ENST00000556078 HOXA2O43364 376 aa7.41□□□□□ -1.22
EFCAB11-210ENST00000556078 DNMT3AQ9Y6K1 912 aaPredicted RBP7.41□□□□□ -1.22
EFCAB11-210ENST00000556078 IRS1P35568 1242 aa7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 SH3BP2P78314 561 aa7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 SCARF1Q14162 830 aa7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 PTCRAQ6ISU1 281 aaPredicted RBP7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 HLA-CQ95604 372 aa7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
EFCAB11-210ENST00000556078 AMER1Q5JTC6 1135 aaPredicted RBP7.39□□□□□ -1.23
EFCAB11-210ENST00000556078 MPNDQ8N594 471 aa7.39□□□□□ -1.23
EFCAB11-210ENST00000556078 MRPL14Q6P1L8 145 aaKnown RBP7.38□□□□□ -1.23
EFCAB11-210ENST00000556078 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
EFCAB11-210ENST00000556078 CNTNAP3BQ96NU0 1288 aa7.37□□□□□ -1.23
EFCAB11-210ENST00000556078 CNTNAP3Q9BZ76 1288 aa7.37□□□□□ -1.23
EFCAB11-210ENST00000556078 PLEKHG3A1L390 1219 aa7.36□□□□□ -1.23
EFCAB11-210ENST00000556078 PPFIA3O75145 1194 aa7.36□□□□□ -1.23
EFCAB11-210ENST00000556078 FOXK2Q01167 660 aa7.35□□□□□ -1.23
EFCAB11-210ENST00000556078 PSMG3-AS1Q96PY0 264 aa7.35□□□□□ -1.23
EFCAB11-210ENST00000556078 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 MAN1A2O60476 641 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 CCNYL3P0C7X3 344 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 VARSP26640 1264 aaKnown RBP7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 GUCA2AQ02747 115 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 NNTQ13423 1086 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 GPIHBP1Q8IV16 184 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
EFCAB11-210ENST00000556078 ADAM23O75077 832 aa7.33□□□□□ -1.24
EFCAB11-210ENST00000556078 ADH1CP00326 375 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms