RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 CDK12Q9NYV4 1490 aaPredicted RBP26.37■■□□□ 1.81
NPC2-208ENST00000556009 COL22A1Q8NFW1 1626 aaPredicted RBP26.36■■□□□ 1.81
NPC2-208ENST00000556009 TECPR2O15040 1411 aa26.35■■□□□ 1.81
NPC2-208ENST00000556009 LRPPRCP42704 1394 aaKnown RBP26.34■■□□□ 1.81
NPC2-208ENST00000556009 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
NPC2-208ENST00000556009 C8orf37Q96NL8 207 aa26.34■■□□□ 1.81
NPC2-208ENST00000556009 UPF1Q92900 1129 aaKnown RBP eCLIP26.33■■□□□ 1.81
NPC2-208ENST00000556009 MARF1Q9Y4F3 1742 aaKnown RBP26.33■■□□□ 1.81
NPC2-208ENST00000556009 RGS12O14924 1447 aa26.31■■□□□ 1.8
NPC2-208ENST00000556009 STK26Q9P289 416 aa26.31■■□□□ 1.8
NPC2-208ENST00000556009 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
NPC2-208ENST00000556009 ESCO1Q5FWF5 840 aa26.3■■□□□ 1.8
NPC2-208ENST00000556009 WAPLQ7Z5K2 1190 aa26.3■■□□□ 1.8
NPC2-208ENST00000556009 QTRT2Q9H974 415 aaKnown RBP26.3■■□□□ 1.8
NPC2-208ENST00000556009 PIK3C2GO75747 1445 aa26.3■■□□□ 1.8
NPC2-208ENST00000556009 RGPD8O14715 1765 aaPredicted RBP26.29■■□□□ 1.8
NPC2-208ENST00000556009 SIRT1Q96EB6 747 aa26.29■■□□□ 1.8
NPC2-208ENST00000556009 NGLY1Q96IV0 654 aa26.29■■□□□ 1.8
NPC2-208ENST00000556009 NPHP3Q7Z494 1330 aa26.29■■□□□ 1.8
NPC2-208ENST00000556009 PXDNQ92626 1479 aa26.29■■□□□ 1.8
NPC2-208ENST00000556009 ADAMTS2O95450 1211 aa26.28■■□□□ 1.8
NPC2-208ENST00000556009 RBM6P78332 1123 aaKnown RBP26.28■■□□□ 1.8
NPC2-208ENST00000556009 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
NPC2-208ENST00000556009 PLEKHH1Q9ULM0 1364 aa26.26■■□□□ 1.79
NPC2-208ENST00000556009 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
NPC2-208ENST00000556009 MYOM2P54296 1465 aa26.23■■□□□ 1.79
NPC2-208ENST00000556009 YTHDC2Q9H6S0 1430 aaKnown RBP26.23■■□□□ 1.79
NPC2-208ENST00000556009 FOXO3O43524 673 aa26.23■■□□□ 1.79
NPC2-208ENST00000556009 FNBP4Q8N3X1 1017 aaPredicted RBP26.22■■□□□ 1.79
NPC2-208ENST00000556009 NRXN1Q9ULB1 1477 aa26.21■■□□□ 1.79
NPC2-208ENST00000556009 KIF1AQ12756 1690 aa26.21■■□□□ 1.79
NPC2-208ENST00000556009 NUTM2FA1L443 756 aa26.2■■□□□ 1.78
NPC2-208ENST00000556009 XPCQ01831 940 aaPredicted RBP26.19■■□□□ 1.78
NPC2-208ENST00000556009 USP21Q9UK80 565 aa26.19■■□□□ 1.78
NPC2-208ENST00000556009 DHX57Q6P158 1386 aaKnown RBP26.18■■□□□ 1.78
NPC2-208ENST00000556009 RAB3GAP2Q9H2M9 1393 aa26.18■■□□□ 1.78
NPC2-208ENST00000556009 CFAP70Q5T0N1 1121 aa26.17■■□□□ 1.78
NPC2-208ENST00000556009 TRPC5Q9UL62 973 aaPredicted RBP26.17■■□□□ 1.78
NPC2-208ENST00000556009 ATRNO75882 1429 aa26.14■■□□□ 1.78
NPC2-208ENST00000556009 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.14■■□□□ 1.78
NPC2-208ENST00000556009 BCL9LQ86UU0 1499 aa26.11■■□□□ 1.77
NPC2-208ENST00000556009 SPATA31A3Q5VYP0 1347 aa26.11■■□□□ 1.77
NPC2-208ENST00000556009 ABCA3Q99758 1704 aa26.11■■□□□ 1.77
NPC2-208ENST00000556009 USP32Q8NFA0 1604 aa26.1■■□□□ 1.77
NPC2-208ENST00000556009 HRCP23327 699 aa26.09■■□□□ 1.77
NPC2-208ENST00000556009 KRT28Q7Z3Y7 464 aa26.09■■□□□ 1.77
NPC2-208ENST00000556009 PRAM1Q96QH2 718 aa26.08■■□□□ 1.77
NPC2-208ENST00000556009 STAC3Q96MF2 364 aa26.07■■□□□ 1.76
NPC2-208ENST00000556009 PHF8Q9UPP1 1060 aa26.07■■□□□ 1.76
NPC2-208ENST00000556009 ADGRB1O14514 1584 aa26.06■■□□□ 1.76
NPC2-208ENST00000556009 DLC1Q96QB1 1528 aa26.05■■□□□ 1.76
NPC2-208ENST00000556009 PSME1Q06323 249 aa26.05■■□□□ 1.76
NPC2-208ENST00000556009 ADGRB2O60241 1585 aa26.04■■□□□ 1.76
NPC2-208ENST00000556009 PLCH1Q4KWH8 1693 aa26.04■■□□□ 1.76
NPC2-208ENST00000556009 EP400Q96L91 3159 aa26.04■■□□□ 1.76
NPC2-208ENST00000556009 GLI3P10071 1580 aa26.03■■□□□ 1.76
NPC2-208ENST00000556009 BRWD3Q6RI45 1802 aa26.03■■□□□ 1.76
NPC2-208ENST00000556009 POGKQ9P215 609 aa26.03■■□□□ 1.76
NPC2-208ENST00000556009 ATAD2Q6PL18 1390 aa26.03■■□□□ 1.76
NPC2-208ENST00000556009 SLIT2O94813 1529 aa26.02■■□□□ 1.76
NPC2-208ENST00000556009 SAFB2Q14151 953 aaKnown RBP eCLIP26.01■■□□□ 1.75
NPC2-208ENST00000556009 GJD4Q96KN9 370 aaPredicted RBP26.01■■□□□ 1.75
NPC2-208ENST00000556009 TNS3Q68CZ2 1445 aa26■■□□□ 1.75
NPC2-208ENST00000556009 DCAF11Q8TEB1 546 aa26■■□□□ 1.75
NPC2-208ENST00000556009 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
NPC2-208ENST00000556009 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
NPC2-208ENST00000556009 SBNO1A3KN83 1393 aa25.99■■□□□ 1.75
NPC2-208ENST00000556009 UNC5CLQ8IV45 518 aa25.99■■□□□ 1.75
NPC2-208ENST00000556009 NWD2Q9ULI1 1742 aa25.98■■□□□ 1.75
NPC2-208ENST00000556009 TRAK1Q9UPV9 953 aa25.97■■□□□ 1.75
NPC2-208ENST00000556009 KDM2AQ9Y2K7 1162 aa25.97■■□□□ 1.75
NPC2-208ENST00000556009 ARHGEF28Q8N1W1 1705 aaKnown RBP25.95■■□□□ 1.74
NPC2-208ENST00000556009 RALGAPBQ86X10 1494 aa25.95■■□□□ 1.74
NPC2-208ENST00000556009 ALS2Q96Q42 1657 aa25.94■■□□□ 1.74
NPC2-208ENST00000556009 ARHGEF10O15013 1369 aa25.94■■□□□ 1.74
NPC2-208ENST00000556009 CCDC125Q86Z20 511 aa25.92■■□□□ 1.74
NPC2-208ENST00000556009 PMFBP1Q8TBY8 1022 aa25.92■■□□□ 1.74
NPC2-208ENST00000556009 CABLES1Q8TDN4 633 aa25.92■■□□□ 1.74
NPC2-208ENST00000556009 EIF3AQ14152 1382 aaKnown RBP25.92■■□□□ 1.74
NPC2-208ENST00000556009 NRAPQ86VF7 1730 aa25.91■■□□□ 1.74
NPC2-208ENST00000556009 CRYBG1Q9Y4K1 1723 aa25.91■■□□□ 1.74
NPC2-208ENST00000556009 HAP1P54257 671 aaPredicted RBP25.91■■□□□ 1.74
NPC2-208ENST00000556009 MINK1Q8N4C8 1332 aaPredicted RBP25.89■■□□□ 1.74
NPC2-208ENST00000556009 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.74
NPC2-208ENST00000556009 PLEKHG5O94827 1062 aa25.89■■□□□ 1.74
NPC2-208ENST00000556009 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
NPC2-208ENST00000556009 TULP4Q9NRJ4 1543 aa25.88■■□□□ 1.73
NPC2-208ENST00000556009 LMOD2Q6P5Q4 547 aa25.88■■□□□ 1.73
NPC2-208ENST00000556009 VPS72Q15906 364 aa25.87■■□□□ 1.73
NPC2-208ENST00000556009 PRR36Q9H6K5 1346 aa25.87■■□□□ 1.73
NPC2-208ENST00000556009 ITSN1Q15811 1721 aa25.86■■□□□ 1.73
NPC2-208ENST00000556009 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
NPC2-208ENST00000556009 FAM83GA6ND36 823 aa25.84■■□□□ 1.73
NPC2-208ENST00000556009 ONECUT3O60422 494 aaPredicted RBP25.84■■□□□ 1.73
NPC2-208ENST00000556009 COL14A1Q05707 1796 aaKnown RBP25.81■■□□□ 1.72
NPC2-208ENST00000556009 SEPT12Q8IYM1 358 aa25.79■■□□□ 1.72
NPC2-208ENST00000556009 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
NPC2-208ENST00000556009 TOPAZ1Q8N9V7 1692 aa25.78■■□□□ 1.72
NPC2-208ENST00000556009 KIAA1210Q9ULL0 1709 aa25.78■■□□□ 1.72
NPC2-208ENST00000556009 SRCAPQ6ZRS2 3230 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms