RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 ADAMTS2O95450 1211 aa25.34■■□□□ 1.65
XRCC3-215ENST00000555964 RGS12O14924 1447 aa25.34■■□□□ 1.65
XRCC3-215ENST00000555964 IFT172Q9UG01 1749 aa25.34■■□□□ 1.65
XRCC3-215ENST00000555964 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
XRCC3-215ENST00000555964 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
XRCC3-215ENST00000555964 TECPR2O15040 1411 aa25.31■■□□□ 1.64
XRCC3-215ENST00000555964 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
XRCC3-215ENST00000555964 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
XRCC3-215ENST00000555964 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
XRCC3-215ENST00000555964 USP21Q9UK80 565 aa25.28■■□□□ 1.64
XRCC3-215ENST00000555964 TRPC5Q9UL62 973 aaPredicted RBP25.28■■□□□ 1.64
XRCC3-215ENST00000555964 MARF1Q9Y4F3 1742 aaKnown RBP25.27■■□□□ 1.64
XRCC3-215ENST00000555964 FOXD1Q16676 465 aa25.27■■□□□ 1.64
XRCC3-215ENST00000555964 ADGRF5Q8IZF2 1346 aa25.27■■□□□ 1.64
XRCC3-215ENST00000555964 RGL3Q3MIN7 710 aa25.26■■□□□ 1.63
XRCC3-215ENST00000555964 MPHOSPH9Q99550 1183 aa25.25■■□□□ 1.63
XRCC3-215ENST00000555964 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
XRCC3-215ENST00000555964 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
XRCC3-215ENST00000555964 MYOM2P54296 1465 aa25.25■■□□□ 1.63
XRCC3-215ENST00000555964 PXDNQ92626 1479 aa25.25■■□□□ 1.63
XRCC3-215ENST00000555964 KIF1AQ12756 1690 aa25.24■■□□□ 1.63
XRCC3-215ENST00000555964 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
XRCC3-215ENST00000555964 FNBP4Q8N3X1 1017 aaPredicted RBP25.24■■□□□ 1.63
XRCC3-215ENST00000555964 STK26Q9P289 416 aa25.23■■□□□ 1.63
XRCC3-215ENST00000555964 FMN2Q9NZ56 1722 aa25.22■■□□□ 1.63
XRCC3-215ENST00000555964 ATRNO75882 1429 aa25.2■■□□□ 1.63
XRCC3-215ENST00000555964 FOXO3O43524 673 aa25.19■■□□□ 1.62
XRCC3-215ENST00000555964 YTHDC2Q9H6S0 1430 aaKnown RBP25.19■■□□□ 1.62
XRCC3-215ENST00000555964 WAPLQ7Z5K2 1190 aa25.18■■□□□ 1.62
XRCC3-215ENST00000555964 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
XRCC3-215ENST00000555964 TMEM132EQ6IEE7 984 aa25.15■■□□□ 1.62
XRCC3-215ENST00000555964 SIRT1Q96EB6 747 aa25.15■■□□□ 1.62
XRCC3-215ENST00000555964 PLEKHH1Q9ULM0 1364 aa25.14■■□□□ 1.61
XRCC3-215ENST00000555964 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
XRCC3-215ENST00000555964 XPCQ01831 940 aaPredicted RBP25.13■■□□□ 1.61
XRCC3-215ENST00000555964 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
XRCC3-215ENST00000555964 BCL9LQ86UU0 1499 aa25.12■■□□□ 1.61
XRCC3-215ENST00000555964 NRXN1Q9ULB1 1477 aa25.11■■□□□ 1.61
XRCC3-215ENST00000555964 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
XRCC3-215ENST00000555964 SPATA31A3Q5VYP0 1347 aa25.1■■□□□ 1.61
XRCC3-215ENST00000555964 USP32Q8NFA0 1604 aa25.08■■□□□ 1.61
XRCC3-215ENST00000555964 RGPD8O14715 1765 aaPredicted RBP25.08■■□□□ 1.61
XRCC3-215ENST00000555964 PSME1Q06323 249 aa25.07■■□□□ 1.6
XRCC3-215ENST00000555964 CCDC125Q86Z20 511 aa25.07■■□□□ 1.6
XRCC3-215ENST00000555964 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
XRCC3-215ENST00000555964 TNS3Q68CZ2 1445 aa25.06■■□□□ 1.6
XRCC3-215ENST00000555964 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
XRCC3-215ENST00000555964 UNC5CLQ8IV45 518 aa25.05■■□□□ 1.6
XRCC3-215ENST00000555964 PHF8Q9UPP1 1060 aa25.05■■□□□ 1.6
XRCC3-215ENST00000555964 SLIT2O94813 1529 aa25.05■■□□□ 1.6
XRCC3-215ENST00000555964 DLC1Q96QB1 1528 aa25.04■■□□□ 1.6
XRCC3-215ENST00000555964 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
XRCC3-215ENST00000555964 CFAP70Q5T0N1 1121 aa25.02■■□□□ 1.6
XRCC3-215ENST00000555964 NWD2Q9ULI1 1742 aa25.02■■□□□ 1.6
XRCC3-215ENST00000555964 SBNO1A3KN83 1393 aa25.02■■□□□ 1.6
XRCC3-215ENST00000555964 ARHGEF10O15013 1369 aa25.01■■□□□ 1.59
XRCC3-215ENST00000555964 ANKARQ7Z5J8 1434 aa25.01■■□□□ 1.59
XRCC3-215ENST00000555964 PRAM1Q96QH2 718 aa25■■□□□ 1.59
XRCC3-215ENST00000555964 POGKQ9P215 609 aa25■■□□□ 1.59
XRCC3-215ENST00000555964 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
XRCC3-215ENST00000555964 ADGRB2O60241 1585 aa25■■□□□ 1.59
XRCC3-215ENST00000555964 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
XRCC3-215ENST00000555964 GLI3P10071 1580 aa24.98■■□□□ 1.59
XRCC3-215ENST00000555964 EIF3AQ14152 1382 aaKnown RBP24.98■■□□□ 1.59
XRCC3-215ENST00000555964 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
XRCC3-215ENST00000555964 PLCH1Q4KWH8 1693 aa24.97■■□□□ 1.59
XRCC3-215ENST00000555964 RAB3GAP2Q9H2M9 1393 aa24.95■■□□□ 1.59
XRCC3-215ENST00000555964 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.58
XRCC3-215ENST00000555964 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
XRCC3-215ENST00000555964 LMOD2Q6P5Q4 547 aa24.93■■□□□ 1.58
XRCC3-215ENST00000555964 BLMP54132 1417 aaPredicted RBP24.93■■□□□ 1.58
XRCC3-215ENST00000555964 EP400Q96L91 3159 aa24.93■■□□□ 1.58
XRCC3-215ENST00000555964 ADGRB1O14514 1584 aa24.93■■□□□ 1.58
XRCC3-215ENST00000555964 VPS72Q15906 364 aa24.92■■□□□ 1.58
XRCC3-215ENST00000555964 STAC3Q96MF2 364 aa24.92■■□□□ 1.58
XRCC3-215ENST00000555964 GPRASP1Q5JY77 1395 aa24.9■■□□□ 1.58
XRCC3-215ENST00000555964 CCDC9Q9Y3X0 531 aaKnown RBP24.89■■□□□ 1.58
XRCC3-215ENST00000555964 TRPM3Q9HCF6 1732 aaPredicted RBP24.89■■□□□ 1.57
XRCC3-215ENST00000555964 TULP4Q9NRJ4 1543 aa24.88■■□□□ 1.57
XRCC3-215ENST00000555964 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
XRCC3-215ENST00000555964 CABLES1Q8TDN4 633 aa24.88■■□□□ 1.57
XRCC3-215ENST00000555964 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
XRCC3-215ENST00000555964 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
XRCC3-215ENST00000555964 ALS2Q96Q42 1657 aa24.86■■□□□ 1.57
XRCC3-215ENST00000555964 SEPT12Q8IYM1 358 aa24.86■■□□□ 1.57
XRCC3-215ENST00000555964 TRAK1Q9UPV9 953 aa24.86■■□□□ 1.57
XRCC3-215ENST00000555964 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
XRCC3-215ENST00000555964 PLEKHG5O94827 1062 aa24.84■■□□□ 1.57
XRCC3-215ENST00000555964 NRAPQ86VF7 1730 aa24.83■■□□□ 1.57
XRCC3-215ENST00000555964 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
XRCC3-215ENST00000555964 MINK1Q8N4C8 1332 aaPredicted RBP24.83■■□□□ 1.56
XRCC3-215ENST00000555964 ONECUT3O60422 494 aaPredicted RBP24.82■■□□□ 1.56
XRCC3-215ENST00000555964 HIRIP3Q9BW71 556 aaPredicted RBP24.82■■□□□ 1.56
XRCC3-215ENST00000555964 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
XRCC3-215ENST00000555964 WASLO00401 505 aaPredicted RBP24.81■■□□□ 1.56
XRCC3-215ENST00000555964 KRT27Q7Z3Y8 459 aa24.81■■□□□ 1.56
XRCC3-215ENST00000555964 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
XRCC3-215ENST00000555964 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
XRCC3-215ENST00000555964 NGDNQ8NEJ9 315 aaKnown RBP24.79■■□□□ 1.56
XRCC3-215ENST00000555964 A0A0G2JS52 829 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms