RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
SLIRP-204ENST00000555890 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
SLIRP-204ENST00000555890 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-204ENST00000555890 UNC13BO14795 1591 aa10.12□□□□□ -0.79
SLIRP-204ENST00000555890 SAMD9LQ8IVG5 1584 aa10.12□□□□□ -0.79
SLIRP-204ENST00000555890 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
SLIRP-204ENST00000555890 CHD4Q14839 1912 aa10.11□□□□□ -0.79
SLIRP-204ENST00000555890 ARHGAP23Q9P227 1491 aa10.11□□□□□ -0.79
SLIRP-204ENST00000555890 PLXNC1O60486 1568 aa10.11□□□□□ -0.79
SLIRP-204ENST00000555890 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
SLIRP-204ENST00000555890 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
SLIRP-204ENST00000555890 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-204ENST00000555890 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-204ENST00000555890 FAM135AQ9P2D6 1515 aa10.11□□□□□ -0.79
SLIRP-204ENST00000555890 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
SLIRP-204ENST00000555890 PREX2Q70Z35 1606 aa10.09□□□□□ -0.79
SLIRP-204ENST00000555890 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-204ENST00000555890 GGT6Q6P531 493 aa10.09□□□□□ -0.79
SLIRP-204ENST00000555890 POTEGQ6S5H5 508 aa10.09□□□□□ -0.79
SLIRP-204ENST00000555890 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-204ENST00000555890 TNRQ92752 1358 aa10.09□□□□□ -0.79
SLIRP-204ENST00000555890 ATP7AQ04656 1500 aa10.08□□□□□ -0.8
SLIRP-204ENST00000555890 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
SLIRP-204ENST00000555890 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
SLIRP-204ENST00000555890 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-204ENST00000555890 AHDC1Q5TGY3 1603 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-204ENST00000555890 A2MP01023 1474 aa10.07□□□□□ -0.8
SLIRP-204ENST00000555890 LRRC59Q96AG4 307 aaKnown RBP10.07□□□□□ -0.8
SLIRP-204ENST00000555890 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
SLIRP-204ENST00000555890 NCOA2Q15596 1464 aa10.06□□□□□ -0.8
SLIRP-204ENST00000555890 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.85e-9■■■■■ 34.7
SLIRP-204ENST00000555890 NUBP1P53384 320 aa10.06□□□□□ -0.8
SLIRP-204ENST00000555890 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
SLIRP-204ENST00000555890 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-204ENST00000555890 TIMELESSQ9UNS1 1208 aa10.06□□□□□ -0.8
SLIRP-204ENST00000555890 CDC42BPAQ5VT25 1732 aa10.05□□□□□ -0.8
SLIRP-204ENST00000555890 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-204ENST00000555890 KCNA6P17658 529 aa10.05□□□□□ -0.8
SLIRP-204ENST00000555890 FAM50AQ14320 339 aaKnown RBP10.05□□□□□ -0.8
SLIRP-204ENST00000555890 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
SLIRP-204ENST00000555890 DIP2AQ14689 1571 aa10.05□□□□□ -0.8
SLIRP-204ENST00000555890 ABCC3O15438 1527 aa10.04□□□□□ -0.8
SLIRP-204ENST00000555890 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
SLIRP-204ENST00000555890 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
SLIRP-204ENST00000555890 STK25O00506 426 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 ITGAEP38570 1179 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
SLIRP-204ENST00000555890 SYT17Q9BSW7 474 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
SLIRP-204ENST00000555890 UGGT1Q9NYU2 1555 aa10.03□□□□□ -0.8
SLIRP-204ENST00000555890 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-204ENST00000555890 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.8
SLIRP-204ENST00000555890 MIA2Q96PC5 1412 aa10.02□□□□□ -0.81
SLIRP-204ENST00000555890 SETD5Q9C0A6 1442 aa10.02□□□□□ -0.81
SLIRP-204ENST00000555890 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-204ENST00000555890 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
SLIRP-204ENST00000555890 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
SLIRP-204ENST00000555890 GPR162Q16538 588 aa10.01□□□□□ -0.81
SLIRP-204ENST00000555890 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
SLIRP-204ENST00000555890 PZPP20742 1482 aa10.01□□□□□ -0.81
SLIRP-204ENST00000555890 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
SLIRP-204ENST00000555890 ZNF777Q9ULD5 760 aaPredicted RBP10□□□□□ -0.81
SLIRP-204ENST00000555890 GPATCH8Q9UKJ3 1502 aaKnown RBP10□□□□□ -0.81
SLIRP-204ENST00000555890 PITPNM2Q9BZ72 1349 aa10□□□□□ -0.81
SLIRP-204ENST00000555890 PTPN23Q9H3S7 1636 aa10□□□□□ -0.81
SLIRP-204ENST00000555890 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 DLL1O00548 723 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 RGS19P49795 217 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 SEPT12Q8IYM1 358 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 MPNDQ8N594 471 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 USP19O94966 1318 aa9.99□□□□□ -0.81
SLIRP-204ENST00000555890 NLRP1Q9C000 1473 aa9.98□□□□□ -0.81
SLIRP-204ENST00000555890 PRDM15P57071 1507 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-204ENST00000555890 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-204ENST00000555890 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
SLIRP-204ENST00000555890 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
SLIRP-204ENST00000555890 PCNTO95613 3336 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 ADGBQ8N7X0 1667 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 HSPA1AP0DMV8 641 aaKnown RBP9.97□□□□□ -0.81
SLIRP-204ENST00000555890 HSPA1BP0DMV9 641 aaKnown RBP9.97□□□□□ -0.81
SLIRP-204ENST00000555890 LTKP29376 864 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 SGIP1Q9BQI5 828 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-204ENST00000555890 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
SLIRP-204ENST00000555890 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 ATP10DQ9P241 1426 aa9.97□□□□□ -0.81
SLIRP-204ENST00000555890 CAMKK2Q96RR4 588 aa9.96□□□□□ -0.82
SLIRP-204ENST00000555890 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
SLIRP-204ENST00000555890 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
SLIRP-204ENST00000555890 MBD5Q9P267 1494 aa9.95□□□□□ -0.82
SLIRP-204ENST00000555890 SPHKAPQ2M3C7 1700 aa9.94□□□□□ -0.82
SLIRP-204ENST00000555890 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
SLIRP-204ENST00000555890 RAB3GAP2Q9H2M9 1393 aa9.94□□□□□ -0.82
SLIRP-204ENST00000555890 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
SLIRP-204ENST00000555890 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
SLIRP-204ENST00000555890 DHX57Q6P158 1386 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms