RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 HRCP23327 699 aa18.8■□□□□ 0.6
HNRNPC-221ENST00000555883 SIRT1Q96EB6 747 aa18.79■□□□□ 0.6
HNRNPC-221ENST00000555883 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.6
HNRNPC-221ENST00000555883 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
HNRNPC-221ENST00000555883 C14orf93Q9H972 538 aaKnown RBP18.77■□□□□ 0.6
HNRNPC-221ENST00000555883 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
HNRNPC-221ENST00000555883 NPHP3Q7Z494 1330 aa18.74■□□□□ 0.59
HNRNPC-221ENST00000555883 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
HNRNPC-221ENST00000555883 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 TMEM132EQ6IEE7 984 aa18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 STK26Q9P289 416 aa18.73■□□□□ 0.59
HNRNPC-221ENST00000555883 DHX57Q6P158 1386 aaKnown RBP18.72■□□□□ 0.59
HNRNPC-221ENST00000555883 COL22A1Q8NFW1 1626 aaPredicted RBP18.72■□□□□ 0.59
HNRNPC-221ENST00000555883 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
HNRNPC-221ENST00000555883 AFF2P51816 1311 aa18.71■□□□□ 0.59
HNRNPC-221ENST00000555883 PXDNQ92626 1479 aa18.71■□□□□ 0.59
HNRNPC-221ENST00000555883 PLEKHH1Q9ULM0 1364 aa18.7■□□□□ 0.58
HNRNPC-221ENST00000555883 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
HNRNPC-221ENST00000555883 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
HNRNPC-221ENST00000555883 RXRBP28702 533 aa18.69■□□□□ 0.58
HNRNPC-221ENST00000555883 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
HNRNPC-221ENST00000555883 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
HNRNPC-221ENST00000555883 ADGRB1O14514 1584 aa18.67■□□□□ 0.58
HNRNPC-221ENST00000555883 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
HNRNPC-221ENST00000555883 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
HNRNPC-221ENST00000555883 FOXO3O43524 673 aa18.65■□□□□ 0.58
HNRNPC-221ENST00000555883 FNBP4Q8N3X1 1017 aaPredicted RBP18.63■□□□□ 0.57
HNRNPC-221ENST00000555883 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
HNRNPC-221ENST00000555883 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
HNRNPC-221ENST00000555883 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
HNRNPC-221ENST00000555883 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
HNRNPC-221ENST00000555883 ANKARQ7Z5J8 1434 aa18.61■□□□□ 0.57
HNRNPC-221ENST00000555883 ADAMTS2O95450 1211 aa18.61■□□□□ 0.57
HNRNPC-221ENST00000555883 QTRT2Q9H974 415 aaKnown RBP18.61■□□□□ 0.57
HNRNPC-221ENST00000555883 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
HNRNPC-221ENST00000555883 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
HNRNPC-221ENST00000555883 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
HNRNPC-221ENST00000555883 RGS12O14924 1447 aa18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 UPF1Q92900 1129 aaKnown RBP eCLIP18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 POGKQ9P215 609 aa18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 USP21Q9UK80 565 aa18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 TRPC5Q9UL62 973 aaPredicted RBP18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
HNRNPC-221ENST00000555883 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
HNRNPC-221ENST00000555883 ATRNO75882 1429 aa18.56■□□□□ 0.56
HNRNPC-221ENST00000555883 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
HNRNPC-221ENST00000555883 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
HNRNPC-221ENST00000555883 PSME1Q06323 249 aa18.55■□□□□ 0.56
HNRNPC-221ENST00000555883 KRT28Q7Z3Y7 464 aa18.55■□□□□ 0.56
HNRNPC-221ENST00000555883 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
HNRNPC-221ENST00000555883 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
HNRNPC-221ENST00000555883 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
HNRNPC-221ENST00000555883 USP32Q8NFA0 1604 aa18.53■□□□□ 0.56
HNRNPC-221ENST00000555883 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
HNRNPC-221ENST00000555883 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
HNRNPC-221ENST00000555883 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
HNRNPC-221ENST00000555883 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
HNRNPC-221ENST00000555883 RGPD8O14715 1765 aaPredicted RBP18.51■□□□□ 0.55
HNRNPC-221ENST00000555883 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.51■□□□□ 0.55
HNRNPC-221ENST00000555883 SLIT2O94813 1529 aa18.5■□□□□ 0.55
HNRNPC-221ENST00000555883 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
HNRNPC-221ENST00000555883 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
HNRNPC-221ENST00000555883 ARHGEF28Q8N1W1 1705 aaKnown RBP18.48■□□□□ 0.55
HNRNPC-221ENST00000555883 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
HNRNPC-221ENST00000555883 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
HNRNPC-221ENST00000555883 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
HNRNPC-221ENST00000555883 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
HNRNPC-221ENST00000555883 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
HNRNPC-221ENST00000555883 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
HNRNPC-221ENST00000555883 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
HNRNPC-221ENST00000555883 TRPM3Q9HCF6 1732 aaPredicted RBP18.45■□□□□ 0.54
HNRNPC-221ENST00000555883 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
HNRNPC-221ENST00000555883 ATP7BP35670 1465 aa18.44■□□□□ 0.54
HNRNPC-221ENST00000555883 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
HNRNPC-221ENST00000555883 EP400Q96L91 3159 aa18.43■□□□□ 0.54
HNRNPC-221ENST00000555883 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
HNRNPC-221ENST00000555883 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
HNRNPC-221ENST00000555883 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
HNRNPC-221ENST00000555883 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
HNRNPC-221ENST00000555883 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
HNRNPC-221ENST00000555883 GLI3P10071 1580 aa18.39■□□□□ 0.53
HNRNPC-221ENST00000555883 VPS72Q15906 364 aa18.39■□□□□ 0.53
HNRNPC-221ENST00000555883 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
HNRNPC-221ENST00000555883 PLCH1Q4KWH8 1693 aa18.38■□□□□ 0.53
HNRNPC-221ENST00000555883 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
HNRNPC-221ENST00000555883 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
HNRNPC-221ENST00000555883 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
HNRNPC-221ENST00000555883 POLR3AO14802 1390 aaPredicted RBP18.38■□□□□ 0.53
HNRNPC-221ENST00000555883 CCDC125Q86Z20 511 aa18.37■□□□□ 0.53
HNRNPC-221ENST00000555883 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
HNRNPC-221ENST00000555883 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
HNRNPC-221ENST00000555883 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
HNRNPC-221ENST00000555883 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
HNRNPC-221ENST00000555883 NBPF1Q3BBV0 1214 aa18.35■□□□□ 0.53
HNRNPC-221ENST00000555883 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
HNRNPC-221ENST00000555883 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms